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The map label for this gene is fdhD [H]

Identifier: 126208367

GI number: 126208367

Start: 1032298

End: 1033104

Strand: Reverse

Name: fdhD [H]

Synonym: APL_0891

Alternate gene names: 126208367

Gene position: 1033104-1032298 (Counterclockwise)

Preceding gene: 126208375

Following gene: 126208366

Centisome position: 45.42

GC content: 45.35

Gene sequence:

>807_bases
ATGAATATAATCACACAAACACAAGCGGTTAAATTACAGCAATTTGTTACGACCGAATTTCAAGAAAACCTTATTTGTGA
GGTACCGGTGGCATTAGTATATAACGGGATTTCTCATGCGGTAATGATGACGACTCCACAAGATTTGGAAGATTTTGCAT
TAGGTTTTTCATTGGCGGAAGGTATTTTAACCGATAAACAAGAGCTATACGGCTTGGATGTGATTGAGCAATGCAACGGC
ATTGAAGTACAAATGGAGATCGCTACTCGCCAATTTGTGGCATTGAAAGAAAGGCGCCGTTCGATGACCGGCAGAACCGG
CTGTGGAATTTGCGGGGTAGAGCAGTTGGAACAAGTCAGTCAAAGTTGCAAATTTTTGCAAAAAAACGACCGCTTGCAAG
CGGTAAATCCGCAAATATTCGATGCTTGTTTACAGCAACTCGAGCAAGCGCAACGGTTGGCTCAACAAACCGGCGCAAGC
CATGCGGCGGCATTTTTTTCTCCGCAGGGGGAATTGCTTGCAATTCGAGAAGACGTCGGCAGACACGTAGCGTTGGATAA
ATTGATCGGTTGGTATGCGAAAGCGGGTAAACCGCTCGGTTTTGTGTTTGTGACCAGCCGCGCCAGTTTTGAGATGGTGC
AAAAATGTTTGGCGGTCGGAATTGAAATGTTATGCGCAATTTCCGCAACAACCGCACTAGCGGTAGAAATTGCTCAAGCG
CATGATTTTACCTTGAGCGCTTTTACTCGCAAAGGAAAAGCGACCGTGTATTCCGGAGAGAAACGTTTATTCTCGGAGAA
AGCATAA

Upstream 100 bases:

>100_bases
TAAAGCGAGTATAGACTGTAATAAAACCTATATATTTCTATTCATAAAAAAATTGTAAAATAAATAATATGGTATTAGCG
TATTAAAGATAGGATAAGTG

Downstream 100 bases:

>100_bases
TATGGAAATCGCTTTCTTATTAGCAGAGAAAATCGCTCAATTAACTATCATTGTGTTGCTTGGTTATTTGTTGGTGAAGC
TGAAATTGCTGACTTCGGAA

Product: formate dehydrogenase accessory protein-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MNIITQTQAVKLQQFVTTEFQENLICEVPVALVYNGISHAVMMTTPQDLEDFALGFSLAEGILTDKQELYGLDVIEQCNG
IEVQMEIATRQFVALKERRRSMTGRTGCGICGVEQLEQVSQSCKFLQKNDRLQAVNPQIFDACLQQLEQAQRLAQQTGAS
HAAAFFSPQGELLAIREDVGRHVALDKLIGWYAKAGKPLGFVFVTSRASFEMVQKCLAVGIEMLCAISATTALAVEIAQA
HDFTLSAFTRKGKATVYSGEKRLFSEKA

Sequences:

>Translated_268_residues
MNIITQTQAVKLQQFVTTEFQENLICEVPVALVYNGISHAVMMTTPQDLEDFALGFSLAEGILTDKQELYGLDVIEQCNG
IEVQMEIATRQFVALKERRRSMTGRTGCGICGVEQLEQVSQSCKFLQKNDRLQAVNPQIFDACLQQLEQAQRLAQQTGAS
HAAAFFSPQGELLAIREDVGRHVALDKLIGWYAKAGKPLGFVFVTSRASFEMVQKCLAVGIEMLCAISATTALAVEIAQA
HDFTLSAFTRKGKATVYSGEKRLFSEKA
>Mature_268_residues
MNIITQTQAVKLQQFVTTEFQENLICEVPVALVYNGISHAVMMTTPQDLEDFALGFSLAEGILTDKQELYGLDVIEQCNG
IEVQMEIATRQFVALKERRRSMTGRTGCGICGVEQLEQVSQSCKFLQKNDRLQAVNPQIFDACLQQLEQAQRLAQQTGAS
HAAAFFSPQGELLAIREDVGRHVALDKLIGWYAKAGKPLGFVFVTSRASFEMVQKCLAVGIEMLCAISATTALAVEIAQA
HDFTLSAFTRKGKATVYSGEKRLFSEKA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=239, Percent_Identity=52.7196652719665, Blast_Score=254, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29521; Mature: 29521

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIITQTQAVKLQQFVTTEFQENLICEVPVALVYNGISHAVMMTTPQDLEDFALGFSLAE
CCCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH
GILTDKQELYGLDVIEQCNGIEVQMEIATRQFVALKERRRSMTGRTGCGICGVEQLEQVS
HHHCCHHHHHCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
QSCKFLQKNDRLQAVNPQIFDACLQQLEQAQRLAQQTGASHAAAFFSPQGELLAIREDVG
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCEEEEHHHHC
RHVALDKLIGWYAKAGKPLGFVFVTSRASFEMVQKCLAVGIEMLCAISATTALAVEIAQA
HHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDFTLSAFTRKGKATVYSGEKRLFSEKA
CCCHHHHHHCCCCEEEECCHHHHHCCCC
>Mature Secondary Structure
MNIITQTQAVKLQQFVTTEFQENLICEVPVALVYNGISHAVMMTTPQDLEDFALGFSLAE
CCCCCCHHHHHHHHHHHHHHHHCCCHHCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH
GILTDKQELYGLDVIEQCNGIEVQMEIATRQFVALKERRRSMTGRTGCGICGVEQLEQVS
HHHCCHHHHHCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
QSCKFLQKNDRLQAVNPQIFDACLQQLEQAQRLAQQTGASHAAAFFSPQGELLAIREDVG
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCEEEEHHHHC
RHVALDKLIGWYAKAGKPLGFVFVTSRASFEMVQKCLAVGIEMLCAISATTALAVEIAQA
HHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HDFTLSAFTRKGKATVYSGEKRLFSEKA
CCCHHHHHHCCCCEEEECCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA