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The map label for this gene is aape0934 [C]

Identifier: 126208341

GI number: 126208341

Start: 1004099

End: 1004938

Strand: Reverse

Name: aape0934 [C]

Synonym: APL_0865

Alternate gene names: 126208341

Gene position: 1004938-1004099 (Counterclockwise)

Preceding gene: 126208345

Following gene: 126208335

Centisome position: 44.18

GC content: 39.05

Gene sequence:

>840_bases
ATGGAAAATGAAATCGAGCTAAAAATCATGCTAAAAGCGGAGAATGTAGAAGCATTGGCGGATTGGTTTACACAACAGAA
TGTTTTAGCGCAAGCAACCGATATATTAGGGAATATTTATTTTGATACGCCGGAACAGTTTTTTGCCCAGAGCAAGATGG
GGTTACGTGTACGTAACCATAATCAAAAGTACGAGATGACTTTAAAAATCAAGGGTGAAATTGTCGATGGGTTGCATATT
CGTCCCGAATATAACTTACCGTTGGCAAGCTACCAGCCGGATTTCAAGCGGTTAAATTCGCACTTTAATTTGCAAATTCC
GCAGGCGGAACAGATTGCGCAACAGCTTTCGCCAACTTTTAGTACCGATTTTACTCGCCGTAAATGGCTAATCGGGCTTA
ATCAATCGCAAATTGAAGTGGCATTAGATCAAGGTATGATCAAAAACGGTTTTGGAGAAGAAGCGATTTGTGAATTGGAG
TTGGAACTTAAAAGCGGCAGCTTAACTGATATATTGGCTTTACTAAAACAAATTCCACGCCAAGACGGTATGTGGTTTAG
CAATTTAAGCAAAGCGCAACGAGGTTATTTAGTTGGACAAGCGGTTAAATTTAAGCAACAAATTAGCAAAGCGATCGAGA
GTAGTTCCGGTGAAGCGTTACTGCAACAATTAGCGGATTATATTCGTACCGTTGAGCAAGATTTGGAAGTGCTAGATTGT
TTTAATCAATTAGCCGGTTTGCAGTTGAATAGTTGGACAGAAGCAAAGCAATATTTAACAAGTAAAGCCTATTTTGAAGA
AAATCTAGCAAAAATCGAACAACGTTTAGCGAAAAACTAA

Upstream 100 bases:

>100_bases
TTTGTGCAGTTTGTTTTGGATTTTGTTAAACATTTCTCGAATACGCTGTAAATTGCTAAAATAAATTGAATTATACAACT
AAATAAACGGGATGACCTTA

Downstream 100 bases:

>100_bases
AATAAAAAAGAACGCCACTATCATCGTGCATAGCGGCGTTTGCTTTATTTGGTTACTTCAAATGTTTGAGGTGGGAAAAT
GATGTCATTAACTTGAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MENEIELKIMLKAENVEALADWFTQQNVLAQATDILGNIYFDTPEQFFAQSKMGLRVRNHNQKYEMTLKIKGEIVDGLHI
RPEYNLPLASYQPDFKRLNSHFNLQIPQAEQIAQQLSPTFSTDFTRRKWLIGLNQSQIEVALDQGMIKNGFGEEAICELE
LELKSGSLTDILALLKQIPRQDGMWFSNLSKAQRGYLVGQAVKFKQQISKAIESSSGEALLQQLADYIRTVEQDLEVLDC
FNQLAGLQLNSWTEAKQYLTSKAYFEENLAKIEQRLAKN

Sequences:

>Translated_279_residues
MENEIELKIMLKAENVEALADWFTQQNVLAQATDILGNIYFDTPEQFFAQSKMGLRVRNHNQKYEMTLKIKGEIVDGLHI
RPEYNLPLASYQPDFKRLNSHFNLQIPQAEQIAQQLSPTFSTDFTRRKWLIGLNQSQIEVALDQGMIKNGFGEEAICELE
LELKSGSLTDILALLKQIPRQDGMWFSNLSKAQRGYLVGQAVKFKQQISKAIESSSGEALLQQLADYIRTVEQDLEVLDC
FNQLAGLQLNSWTEAKQYLTSKAYFEENLAKIEQRLAKN
>Mature_279_residues
MENEIELKIMLKAENVEALADWFTQQNVLAQATDILGNIYFDTPEQFFAQSKMGLRVRNHNQKYEMTLKIKGEIVDGLHI
RPEYNLPLASYQPDFKRLNSHFNLQIPQAEQIAQQLSPTFSTDFTRRKWLIGLNQSQIEVALDQGMIKNGFGEEAICELE
LELKSGSLTDILALLKQIPRQDGMWFSNLSKAQRGYLVGQAVKFKQQISKAIESSSGEALLQQLADYIRTVEQDLEVLDC
FNQLAGLQLNSWTEAKQYLTSKAYFEENLAKIEQRLAKN

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygiF [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=203, Percent_Identity=43.3497536945813, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 31941; Mature: 31941

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENEIELKIMLKAENVEALADWFTQQNVLAQATDILGNIYFDTPEQFFAQSKMGLRVRNH
CCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECC
NQKYEMTLKIKGEIVDGLHIRPEYNLPLASYQPDFKRLNSHFNLQIPQAEQIAQQLSPTF
CCEEEEEEEEECEEECCEEECCCCCCCCCCCCCHHHHHCCCCEEECCCHHHHHHHHCCCC
STDFTRRKWLIGLNQSQIEVALDQGMIKNGFGEEAICELELELKSGSLTDILALLKQIPR
CCCCCHHHEEEECCHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCC
QDGMWFSNLSKAQRGYLVGQAVKFKQQISKAIESSSGEALLQQLADYIRTVEQDLEVLDC
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FNQLAGLQLNSWTEAKQYLTSKAYFEENLAKIEQRLAKN
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MENEIELKIMLKAENVEALADWFTQQNVLAQATDILGNIYFDTPEQFFAQSKMGLRVRNH
CCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECC
NQKYEMTLKIKGEIVDGLHIRPEYNLPLASYQPDFKRLNSHFNLQIPQAEQIAQQLSPTF
CCEEEEEEEEECEEECCEEECCCCCCCCCCCCCHHHHHCCCCEEECCCHHHHHHHHCCCC
STDFTRRKWLIGLNQSQIEVALDQGMIKNGFGEEAICELELELKSGSLTDILALLKQIPR
CCCCCHHHEEEECCHHHHHHHHHCCHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCC
QDGMWFSNLSKAQRGYLVGQAVKFKQQISKAIESSSGEALLQQLADYIRTVEQDLEVLDC
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
FNQLAGLQLNSWTEAKQYLTSKAYFEENLAKIEQRLAKN
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]