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The map label for this gene is yqcC [C]

Identifier: 126208337

GI number: 126208337

Start: 1002384

End: 1002695

Strand: Direct

Name: yqcC [C]

Synonym: APL_0861

Alternate gene names: 126208337

Gene position: 1002384-1002695 (Clockwise)

Preceding gene: 126208336

Following gene: 126208338

Centisome position: 44.07

GC content: 41.35

Gene sequence:

>312_bases
ATGAAAACCAAAGTTAGACAACACTTAACCGATCTAGAAATTGCATTACGTACGCATAAGCAATGGGATGCGGTTGCACC
AAGCTTGGAAGATTTAGCGAACGATCAGCCGTTTTGTATCGGCACACTTAGCCCGACTCAATGGTTACAATGGGTTTTTA
TTCCTCGTATGCACGCACTTTTAGACGCCGGTGCGGATTTACCACGCAACTTTTCGATTACGCCTTACTTGGAAGAAGCC
CTAAAAGACGAAAGCTATTTAAAAGCAATTCATCAGCCGGTGTTATTGATTGAATTATTATTAAAGGACTAA

Upstream 100 bases:

>100_bases
CCAATCACGGAGTTTATTGCGAAAGCCGTTTATGAAACTATGGAACGTACCTTAAACCTGATTTACCCAAACTGGATTAA
CGAACTTAATTAAATAAAAT

Downstream 100 bases:

>100_bases
ATGGAACTTGAGATTTTATATCGTGATGATGAACTGATTGCGATTAATAAACCGGCGGGAATGTTAGTTCACCGATCATG
GCTAGATAAACACGAAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKTKVRQHLTDLEIALRTHKQWDAVAPSLEDLANDQPFCIGTLSPTQWLQWVFIPRMHALLDAGADLPRNFSITPYLEEA
LKDESYLKAIHQPVLLIELLLKD

Sequences:

>Translated_103_residues
MKTKVRQHLTDLEIALRTHKQWDAVAPSLEDLANDQPFCIGTLSPTQWLQWVFIPRMHALLDAGADLPRNFSITPYLEEA
LKDESYLKAIHQPVLLIELLLKD
>Mature_103_residues
MKTKVRQHLTDLEIALRTHKQWDAVAPSLEDLANDQPFCIGTLSPTQWLQWVFIPRMHALLDAGADLPRNFSITPYLEEA
LKDESYLKAIHQPVLLIELLLKD

Specific function: Unknown

COG id: COG3098

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqcC [H]

Homologues:

Organism=Escherichia coli, GI1789156, Length=87, Percent_Identity=42.5287356321839, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007384 [H]

Pfam domain/function: PF04287 DUF446 [H]

EC number: NA

Molecular weight: Translated: 11846; Mature: 11846

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKVRQHLTDLEIALRTHKQWDAVAPSLEDLANDQPFCIGTLSPTQWLQWVFIPRMHAL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH
LDAGADLPRNFSITPYLEEALKDESYLKAIHQPVLLIELLLKD
HHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTKVRQHLTDLEIALRTHKQWDAVAPSLEDLANDQPFCIGTLSPTQWLQWVFIPRMHAL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH
LDAGADLPRNFSITPYLEEALKDESYLKAIHQPVLLIELLLKD
HHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]