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The map label for this gene is udk [H]

Identifier: 126208310

GI number: 126208310

Start: 967638

End: 968291

Strand: Direct

Name: udk [H]

Synonym: APL_0834

Alternate gene names: 126208310

Gene position: 967638-968291 (Clockwise)

Preceding gene: 126208308

Following gene: 126208311

Centisome position: 42.54

GC content: 37.77

Gene sequence:

>654_bases
ATGTCTGAAACCATTGAAAACCAAGCTTGTATCGTGATTGCTATCGCAGATGCCTCCGCATCGGGTAAAAGTCTTATTGC
TTCAACAATTTATAAAGAATTAAAAGAAGAACTTAACTCGGACGATATCGGTATCATTTCGGAAGATGCTTATTATAAAG
ATCAAACCCATTTGACCATGGAAGAACGGGTTAAAACGAATTACGATCATCCGAACTCAATGGATCATCACCTACTCGTT
GAACATCTCCGTCAATTAAAACAAGGAGAAGCGATTGAGATCCCCGAATATGACTATTCGGAACATAACCGTAAAACGAC
AACCAAAAATTTCACACCTAAAAAAATCATTATTCTCGAAGGTATTCTGTTACTTACCGATGAAGAAATTCGTAATGAAA
TCAACGTTTCTATTTTCGTAGATGCGCCGTTAGATATTTGCTTTATTCGCCGTTTACAGCGCGATATGCTAGAACGCGGC
AGAACGATGGATTCCGTTATCGCTCAATATCGTAAAACGGTGCGTCCGATGTTTTTACAATTTATCGAACCGTCAAAACA
GTATGCGGATATTATCGTCCCGAAAGGCGGTAAAAACCGTATTGCGATCAATATTTTAAAAGCTCAAATTAAACAGTTAT
TATCTAAACGATAG

Upstream 100 bases:

>100_bases
CCCACAAGCGGTCGATTATACGCAAAATTTTACAAAAATGCGGTATAATCTCCCGAATTTTATCCTTTTCTTTGAGCATG
AATATATTTAGGAACCGATT

Downstream 100 bases:

>100_bases
GATTTACTATGCGCTTATGTGATACCGATATCGAACGTTATTTAGACGAAGGGATTATTGAAATAATTCCCCGCCCTTCA
AATGAAAAAATTACCGGCGC

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSETIENQACIVIAIADASASGKSLIASTIYKELKEELNSDDIGIISEDAYYKDQTHLTMEERVKTNYDHPNSMDHHLLV
EHLRQLKQGEAIEIPEYDYSEHNRKTTTKNFTPKKIIILEGILLLTDEEIRNEINVSIFVDAPLDICFIRRLQRDMLERG
RTMDSVIAQYRKTVRPMFLQFIEPSKQYADIIVPKGGKNRIAINILKAQIKQLLSKR

Sequences:

>Translated_217_residues
MSETIENQACIVIAIADASASGKSLIASTIYKELKEELNSDDIGIISEDAYYKDQTHLTMEERVKTNYDHPNSMDHHLLV
EHLRQLKQGEAIEIPEYDYSEHNRKTTTKNFTPKKIIILEGILLLTDEEIRNEINVSIFVDAPLDICFIRRLQRDMLERG
RTMDSVIAQYRKTVRPMFLQFIEPSKQYADIIVPKGGKNRIAINILKAQIKQLLSKR
>Mature_216_residues
SETIENQACIVIAIADASASGKSLIASTIYKELKEELNSDDIGIISEDAYYKDQTHLTMEERVKTNYDHPNSMDHHLLVE
HLRQLKQGEAIEIPEYDYSEHNRKTTTKNFTPKKIIILEGILLLTDEEIRNEINVSIFVDAPLDICFIRRLQRDMLERGR
TMDSVIAQYRKTVRPMFLQFIEPSKQYADIIVPKGGKNRIAINILKAQIKQLLSKR

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Homo sapiens, GI301129207, Length=214, Percent_Identity=35.981308411215, Blast_Score=155, Evalue=2e-38,
Organism=Homo sapiens, GI57863312, Length=214, Percent_Identity=35.981308411215, Blast_Score=155, Evalue=2e-38,
Organism=Homo sapiens, GI18699734, Length=213, Percent_Identity=33.3333333333333, Blast_Score=151, Evalue=5e-37,
Organism=Homo sapiens, GI13899253, Length=217, Percent_Identity=33.6405529953917, Blast_Score=142, Evalue=3e-34,
Organism=Homo sapiens, GI209863022, Length=153, Percent_Identity=31.3725490196078, Blast_Score=88, Evalue=7e-18,
Organism=Escherichia coli, GI87082034, Length=211, Percent_Identity=68.2464454976303, Blast_Score=315, Evalue=1e-87,
Organism=Caenorhabditis elegans, GI17539894, Length=209, Percent_Identity=35.4066985645933, Blast_Score=146, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI17539892, Length=209, Percent_Identity=35.4066985645933, Blast_Score=146, Evalue=6e-36,
Organism=Caenorhabditis elegans, GI71981181, Length=217, Percent_Identity=32.7188940092166, Blast_Score=118, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6324339, Length=194, Percent_Identity=31.4432989690722, Blast_Score=110, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28573516, Length=209, Percent_Identity=36.3636363636364, Blast_Score=145, Evalue=2e-35,
Organism=Drosophila melanogaster, GI28573514, Length=209, Percent_Identity=36.3636363636364, Blast_Score=145, Evalue=2e-35,
Organism=Drosophila melanogaster, GI28573512, Length=209, Percent_Identity=36.3636363636364, Blast_Score=145, Evalue=2e-35,
Organism=Drosophila melanogaster, GI45550449, Length=209, Percent_Identity=36.3636363636364, Blast_Score=145, Evalue=2e-35,
Organism=Drosophila melanogaster, GI221458995, Length=226, Percent_Identity=32.3008849557522, Blast_Score=137, Evalue=4e-33,
Organism=Drosophila melanogaster, GI24649624, Length=224, Percent_Identity=32.1428571428571, Blast_Score=135, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 25032; Mature: 24901

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETIENQACIVIAIADASASGKSLIASTIYKELKEELNSDDIGIISEDAYYKDQTHLTM
CCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHH
EERVKTNYDHPNSMDHHLLVEHLRQLKQGEAIEIPEYDYSEHNRKTTTKNFTPKKIIILE
HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEC
GILLLTDEEIRNEINVSIFVDAPLDICFIRRLQRDMLERGRTMDSVIAQYRKTVRPMFLQ
CCCEEECHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FIEPSKQYADIIVPKGGKNRIAINILKAQIKQLLSKR
HHCCCCHHCEEEECCCCCCCEEEHHHHHHHHHHHHCC
>Mature Secondary Structure 
SETIENQACIVIAIADASASGKSLIASTIYKELKEELNSDDIGIISEDAYYKDQTHLTM
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHH
EERVKTNYDHPNSMDHHLLVEHLRQLKQGEAIEIPEYDYSEHNRKTTTKNFTPKKIIILE
HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEC
GILLLTDEEIRNEINVSIFVDAPLDICFIRRLQRDMLERGRTMDSVIAQYRKTVRPMFLQ
CCCEEECHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FIEPSKQYADIIVPKGGKNRIAINILKAQIKQLLSKR
HHCCCCHHCEEEECCCCCCCEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA