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The map label for this gene is ytfM [C]

Identifier: 126208305

GI number: 126208305

Start: 962050

End: 963876

Strand: Reverse

Name: ytfM [C]

Synonym: APL_0829

Alternate gene names: 126208305

Gene position: 963876-962050 (Counterclockwise)

Preceding gene: 126208306

Following gene: 126208304

Centisome position: 42.38

GC content: 42.69

Gene sequence:

>1827_bases
GTGAATTTTAAACCGCATTTCTTAACCGTTTGTTGCTTATGCGCCTTTGCTCATATTGCTAATGCTCAACAATCCGTACA
ACCGGAAAATCACTCGCTCGAATCACCGCAAGATAGCGAGGAAGCCGTACAAGATTTAAAGATTGAAGCCGCCGTTGATT
TGGAAGTAAAAGGGATTGCGGACAAAGATAAAGATGCTTGGGCGAATGTCCAAATTTATCTTGGGCAGATCGCAAAAGAA
TATGCGGACGGTTCGGAGCGTCATCAATATCTGGTACAAACGGCGGTAGATAAAGCGTTGCGTGCCAAAGGGTATTACAA
TACTCGCTATCAATTTGCGCAAACGCCTCGCGCCGGTAAAAAGCCGTTACTGACGTTAAATGTCGAGCTGGACAGTCAAA
AAGTCAAGATTGATGAAACGGATATCCGAATCAGCGGTGAGGCGAGTAAAGACGAAGATTTTACTAAATTGGTCGCTTCA
GCTCCGAAACAAGGAACGGATTTGGATCATGAACAGTATGACGGTTTTAAAAGTAATCTTGAAAGTTTAGCATTTAAAAA
AGGCTATTTTGACGGAAACTGGCTATATCATCGCTTAGAAATTTATCCGAAGGATCATTCGGCGGATTGGCGTTTAGGTT
ACGACAGCGGCGTTCGTTATCGTTACGGTGAAATTACGTTTACGGATAATCAAATTAAAGAAGAATATCTGCGCAATATT
TTAAAAGTGAAATCCGGCGAACATTATTACGCTAATGACCTATCGCAAATGACTTCGGATTATTCGTCAAGCAATTGGTT
TTCTTCAGTATTGGTTGAGCCGCATTTAAACGAAGAGCAAAAAGTTGTCGATTTAAATGTTTTATTTCAGCCGAAGAAAA
AAAATGACGTAGAAGTCGGGATCGGTTTTGCAACCGATGTAGGACCTCGTTTTCAGTTGAACTGGAAAAAACCTTGGCTG
AATAGCCGCGGTCATAATATTGAATCGCGTACGTATATTTCCGCACCGGAACAGCGTTTTGAGTTCGGCTATAATATTCC
GTTGCGTGAAGATCCGCTGCATTACTATTATCAGTTTTCAGGTTCGTTAGAAAACGAAGATCAAAACGATACCGAATCGA
CAGCTGCAACTTTAGGTTTTCAGCGTTTTTGGACGCATGAAACCGGTTGGTCTTTTTCCGCCGGTATAAAAACGCGTTAC
GATTCTTTTACTCAAGCGGGTGAATCGCATCGTACTTTATTAGTTTATCCGACCGCTGCCTTAAATCGTACTCGTTCGGA
CGGCAATCGTTTTCCGCTTTGGGGGGACAGCCAAAGATTAACGGTGAACTGGGGGACAAAAACGTTAGCTTCGGATGTAA
ATTTCTATAGTTGGAAAGCATCCACCACTTGGATCAGAACCTATTTTAAGAATCATCGTTTCTTCTTACGTGCCGAAGTC
GGTCATATTCATTCTAAAGATTTCTATCGTATTCCACCCGCATTACGTTATTTCGCCGGCGGTGATATGAGCATACGAGG
ATTCGGTTATAAGGATATTTCTCCGAGAGATCCGAAAAACGGTAAGTTGATTGGCGGTTCTCATCTAGCGACTGCAACCG
CCGAATATCAATATCAGCTTTATCCGGATTGGTGGGCGGCACTGTTTTATGATACGGGGCTGGCTTCAAATAAATTCGAA
ACGAAAGATTTACACGCCGGAGCGGGGATCGGCGTACGTTGGGCTTCGCCAATCGGTGCGATTAAGTTGGATTTGGCAAC
GCCGGTAAGATCGCCGAATAATAAAAAAGGCGTAAAATTTTATATCGGTTTAGGTTCGGAATTATAA

Upstream 100 bases:

>100_bases
TATGGTGTTTGACGATATGCCCGCGCCGACTTCCGTCGCCCCTTTTAACGTCGTACCGCTATTAAGAGGCGTACCACAAG
ATTAAGATTAGGACGTTATT

Downstream 100 bases:

>100_bases
ATATTATTCAAGCGGATAAATTTATCCGCTTTCTTTGTATCAGGTAAATGGTGAAAACTCATGAGTGAACAGCATAATCA
ACAAGTAGAAAGCGTTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 608

Protein sequence:

>608_residues
MNFKPHFLTVCCLCAFAHIANAQQSVQPENHSLESPQDSEEAVQDLKIEAAVDLEVKGIADKDKDAWANVQIYLGQIAKE
YADGSERHQYLVQTAVDKALRAKGYYNTRYQFAQTPRAGKKPLLTLNVELDSQKVKIDETDIRISGEASKDEDFTKLVAS
APKQGTDLDHEQYDGFKSNLESLAFKKGYFDGNWLYHRLEIYPKDHSADWRLGYDSGVRYRYGEITFTDNQIKEEYLRNI
LKVKSGEHYYANDLSQMTSDYSSSNWFSSVLVEPHLNEEQKVVDLNVLFQPKKKNDVEVGIGFATDVGPRFQLNWKKPWL
NSRGHNIESRTYISAPEQRFEFGYNIPLREDPLHYYYQFSGSLENEDQNDTESTAATLGFQRFWTHETGWSFSAGIKTRY
DSFTQAGESHRTLLVYPTAALNRTRSDGNRFPLWGDSQRLTVNWGTKTLASDVNFYSWKASTTWIRTYFKNHRFFLRAEV
GHIHSKDFYRIPPALRYFAGGDMSIRGFGYKDISPRDPKNGKLIGGSHLATATAEYQYQLYPDWWAALFYDTGLASNKFE
TKDLHAGAGIGVRWASPIGAIKLDLATPVRSPNNKKGVKFYIGLGSEL

Sequences:

>Translated_608_residues
MNFKPHFLTVCCLCAFAHIANAQQSVQPENHSLESPQDSEEAVQDLKIEAAVDLEVKGIADKDKDAWANVQIYLGQIAKE
YADGSERHQYLVQTAVDKALRAKGYYNTRYQFAQTPRAGKKPLLTLNVELDSQKVKIDETDIRISGEASKDEDFTKLVAS
APKQGTDLDHEQYDGFKSNLESLAFKKGYFDGNWLYHRLEIYPKDHSADWRLGYDSGVRYRYGEITFTDNQIKEEYLRNI
LKVKSGEHYYANDLSQMTSDYSSSNWFSSVLVEPHLNEEQKVVDLNVLFQPKKKNDVEVGIGFATDVGPRFQLNWKKPWL
NSRGHNIESRTYISAPEQRFEFGYNIPLREDPLHYYYQFSGSLENEDQNDTESTAATLGFQRFWTHETGWSFSAGIKTRY
DSFTQAGESHRTLLVYPTAALNRTRSDGNRFPLWGDSQRLTVNWGTKTLASDVNFYSWKASTTWIRTYFKNHRFFLRAEV
GHIHSKDFYRIPPALRYFAGGDMSIRGFGYKDISPRDPKNGKLIGGSHLATATAEYQYQLYPDWWAALFYDTGLASNKFE
TKDLHAGAGIGVRWASPIGAIKLDLATPVRSPNNKKGVKFYIGLGSEL
>Mature_608_residues
MNFKPHFLTVCCLCAFAHIANAQQSVQPENHSLESPQDSEEAVQDLKIEAAVDLEVKGIADKDKDAWANVQIYLGQIAKE
YADGSERHQYLVQTAVDKALRAKGYYNTRYQFAQTPRAGKKPLLTLNVELDSQKVKIDETDIRISGEASKDEDFTKLVAS
APKQGTDLDHEQYDGFKSNLESLAFKKGYFDGNWLYHRLEIYPKDHSADWRLGYDSGVRYRYGEITFTDNQIKEEYLRNI
LKVKSGEHYYANDLSQMTSDYSSSNWFSSVLVEPHLNEEQKVVDLNVLFQPKKKNDVEVGIGFATDVGPRFQLNWKKPWL
NSRGHNIESRTYISAPEQRFEFGYNIPLREDPLHYYYQFSGSLENEDQNDTESTAATLGFQRFWTHETGWSFSAGIKTRY
DSFTQAGESHRTLLVYPTAALNRTRSDGNRFPLWGDSQRLTVNWGTKTLASDVNFYSWKASTTWIRTYFKNHRFFLRAEV
GHIHSKDFYRIPPALRYFAGGDMSIRGFGYKDISPRDPKNGKLIGGSHLATATAEYQYQLYPDWWAALFYDTGLASNKFE
TKDLHAGAGIGVRWASPIGAIKLDLATPVRSPNNKKGVKFYIGLGSEL

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=563, Percent_Identity=40.3197158081705, Blast_Score=448, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 69451; Mature: 69451

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKPHFLTVCCLCAFAHIANAQQSVQPENHSLESPQDSEEAVQDLKIEAAVDLEVKGIA
CCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHEEEEEEEEEEEECCC
DKDKDAWANVQIYLGQIAKEYADGSERHQYLVQTAVDKALRAKGYYNTRYQFAQTPRAGK
CCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
KPLLTLNVELDSQKVKIDETDIRISGEASKDEDFTKLVASAPKQGTDLDHEQYDGFKSNL
CCEEEEEEEECCCEEEEECCEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHCCCHHHHH
ESLAFKKGYFDGNWLYHRLEIYPKDHSADWRLGYDSGVRYRYGEITFTDNQIKEEYLRNI
HHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEECCCCCEEEEEEEEECHHHHHHHHHHHH
LKVKSGEHYYANDLSQMTSDYSSSNWFSSVLVEPHLNEEQKVVDLNVLFQPKKKNDVEVG
HHHCCCCEEHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEE
IGFATDVGPRFQLNWKKPWLNSRGHNIESRTYISAPEQRFEFGYNIPLREDPLHYYYQFS
EEEECCCCCCEEEECCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCEEEEEEC
GSLENEDQNDTESTAATLGFQRFWTHETGWSFSAGIKTRYDSFTQAGESHRTLLVYPTAA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHCCCCCCEEEEEEHHH
LNRTRSDGNRFPLWGDSQRLTVNWGTKTLASDVNFYSWKASTTWIRTYFKNHRFFLRAEV
HCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCEEEEECCHHHHHHHHHCCEEEEEEEC
GHIHSKDFYRIPPALRYFAGGDMSIRGFGYKDISPRDPKNGKLIGGSHLATATAEYQYQL
CCCCCCCCEECCHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEEEEEEEEEEE
YPDWWAALFYDTGLASNKFETKDLHAGAGIGVRWASPIGAIKLDLATPVRSPNNKKGVKF
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEE
YIGLGSEL
EEECCCCC
>Mature Secondary Structure
MNFKPHFLTVCCLCAFAHIANAQQSVQPENHSLESPQDSEEAVQDLKIEAAVDLEVKGIA
CCCCCHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHEEEEEEEEEEEECCC
DKDKDAWANVQIYLGQIAKEYADGSERHQYLVQTAVDKALRAKGYYNTRYQFAQTPRAGK
CCCCCCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
KPLLTLNVELDSQKVKIDETDIRISGEASKDEDFTKLVASAPKQGTDLDHEQYDGFKSNL
CCEEEEEEEECCCEEEEECCEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHCCCHHHHH
ESLAFKKGYFDGNWLYHRLEIYPKDHSADWRLGYDSGVRYRYGEITFTDNQIKEEYLRNI
HHHHHHCCCCCCCEEEEEEEEEECCCCCCEEEECCCCCEEEEEEEEECHHHHHHHHHHHH
LKVKSGEHYYANDLSQMTSDYSSSNWFSSVLVEPHLNEEQKVVDLNVLFQPKKKNDVEVG
HHHCCCCEEHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCEEE
IGFATDVGPRFQLNWKKPWLNSRGHNIESRTYISAPEQRFEFGYNIPLREDPLHYYYQFS
EEEECCCCCCEEEECCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCCCCCCCEEEEEEC
GSLENEDQNDTESTAATLGFQRFWTHETGWSFSAGIKTRYDSFTQAGESHRTLLVYPTAA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHCCCCCCEEEEEEHHH
LNRTRSDGNRFPLWGDSQRLTVNWGTKTLASDVNFYSWKASTTWIRTYFKNHRFFLRAEV
HCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCEEEEECCHHHHHHHHHCCEEEEEEEC
GHIHSKDFYRIPPALRYFAGGDMSIRGFGYKDISPRDPKNGKLIGGSHLATATAEYQYQL
CCCCCCCCEECCHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEECCCCEEEEEEEEEEEE
YPDWWAALFYDTGLASNKFETKDLHAGAGIGVRWASPIGAIKLDLATPVRSPNNKKGVKF
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEE
YIGLGSEL
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]