| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is aceE [H]
Identifier: 126208251
GI number: 126208251
Start: 887432
End: 890086
Strand: Reverse
Name: aceE [H]
Synonym: APL_0773
Alternate gene names: 126208251
Gene position: 890086-887432 (Counterclockwise)
Preceding gene: 126208252
Following gene: 126208250
Centisome position: 39.13
GC content: 42.75
Gene sequence:
>2655_bases ATGTCAGAGATCGAAAGAGACGTAGATCCATTCGAAACCAAAGAATGGTTAGAGTCATTAGATTCTTTAATCCGTGTAGA AGGTGTTGAGCGCGCTCAATATATTATTGACCAATTATTAGATCAAGCTCGTACGGAAGGCGTACCTGTTCAATCAGGCG TTACAACTGCATATGTGAATACTATCCCTGTAAGCGCACAACCTGCATATCCCGGCGATCATAAAATTGAACGTCGTATC CGTTCTGCAGTACGTTGGAATGCTATTGCAATGGTTTTACGTAGCCAGAAGAAAGATCTCGACTTAGGTGGTCATATTTC TACTTTCCAATCAGCGGCAACGATGTATGAAGTGTGCTATAACCACTTCTTCAAAGCGGCGACTGAAAAAAACGGCGGTG ACTTAGTATTTTTCCAAGGTCACGCCGCGCCGGGTATGTATGCTCGTGCTTATGTTGAAGGTCGTTTAACGGAAGAGCAA TTAGATAACTTCCGTCAAGAAGCGTTTACCGACGGTTTATCTTCATATCCTCACCCGAAATTAATGCCCGAATTTTGGCA ATTCTCAACCGTATCAATGGGTTTAGGTCCCGTTAATGCGATTTACCAAGCGCGTTTCTTAAAATATCTTGAAAACCGCG GTTTAAAAGATACCGCTGATCAAAAAGTATATGCGTTCTTAGGCGACGGCGAGATGGATGAAATCGAGTCTAAAGGTGCA TTAACTTTCGCAGCGCGTGAAAAATTAGATAACTTAATTTTCACAGTAAGCTGTAACTTACAACGTTTAGACGGTCCGGT AAACGGTAACGGTAAAATCATTCAAGAATTAGAAGGTTTATTTACTGGTGCGGGCTGGGAAGTAATTAAAGTATTATGGG GCGGTAACTGGGATAAATTATTCGCAAAAGATACCTCTGGTAAATTAGCGCAATTAATGATGGAAGTGGTTGATGGCGAC TACTTAACCTTCAAATCGAAAGACGGTGCTTATATCCGTGAACACTTCTTCGGTCGTTACCCTGAAACAGCCGCATTAGT TGCGGATATGACCGATGATGAGATTTGGGATCTTCGCCGTGGTGCGCACGACAGTGAAAAACTTTATGCCGCATATGCGA AAGCACAAAAATCAGACAAACCGGTTGTGATTTTAGCGCACCAAGTTAAAGGTTATAAAATTCCTGAAGCGGAAAGTAAA AATACCGCTCACCAATCGAAAAAAATGTCATTAGAAAGCTTAAAAGGCTTCCGTGACTACTTCGAATTACCATTGACGGA TGAACAAGTAGAAAGCTTAGAGTACATCAAGTTTGCCGAAGGTTCTGAAGAATACAACTACATTCACGGTCACCGTAAAG CATTAAACGGTTATGTGCCGGCTCGTCGTGCCAAATTCGACGTAGAGTATAAAGTCCCTGCATTAGATGAATTTAAAGCA TTACTTGCAGAACAACCACGTGGTATTTCAACCACAATGGCGTTTACACGTGCATTAAATATCTTATTAAAAGATAAAAA TATCGGTAAAACCATCGTTCCGATGATCGTGGACGAAGCGCGTACATTCGGTATGGAAGGTTTATTCCGTCAAGTGGGTA TTTACAACCCGCACGGTCAAAACTATACCCCTTCAGACCGTGATTTAGTGGCTTACTACCGTGAAGCGAAAGACGGTCAA GTATTACAAGAAGGTATCAACGAATTAGGTGGTGCGGCATCTTGGGTGGCTGCGGCGACTTCTTACTCCGTAAGTAACCA ACCGATGATCCCGTTCTTCATCTATTACTCAATGTTCGGTTTCCAACGTGTGGGCGATATGATGTGGTTGGCAGGTGACC AATTAGCGCGCGGTTTCATGGTCGGCGGTACTTCAGGTCGTACAACGTTAAACGGTGAAGGCTTACAACACGAAGACGGT CACAGCCATATCCAAGCGGGTATTATTCCTAACTGTGTAACTTATGATCCATCATTTGCGTTTGAAGTAGCGGTAATTAT GCAAGACGGTATTAACCGTATGTATGGTGAAAAACAAGAAAATGTTTTCTACTATATGACAACATTAAACGAAGTAATGG AGCAGCCTGCAATGCCTGAAGGTGCAGAAGAGGGTATCCGTAAAGGTTTATATAAATTTGAAACGGTTAAAGGTAAAGGT AAAGGTAACGTTCAGTTATTAGGCTCAGGTTCTATTATGCGTCACGTTCGTGAAGCAGCACAGATCCTTGCGAATGACTA CGGCGTAACTTCAGATGTATTCTCAGCTCCGTCATTTAACGAGCTAGCTCGTGAAGGTAACGATGCAGTACGTTGGAACT TATTACACCCGACAGCAGAACAACGCATTCCTTATGTAGCGCAAGTATTAGCGGACTTACCGACAGTCGCTTCAACCGAC TATGTAAAACAATATGCGGATCAAATTCGTGCATTCGTACCAAGCAAACACTATCACGTGTTAGGTACGGACGGTTTCGG TCGTTCGGACAGCCGTGCGAACTTACGTGAGCATTTCGAAGTAGATGCGCGTTATGTTGTTGTTGCAGCATTATCACAAT TAGCGAAAGAAGGCACGGTAGAAACGAAAGTTGTTGCTGATGCAATCGCTAAATTCGGCTTAAACGTAGATCGTATTAAC CCGTTATACGCATAA
Upstream 100 bases:
>100_bases TTATGTCATGCTTGCCAATGGGACGTCTATAATTTCATCAATCGATAAGTTTAAGATACTTAGCTTATCATTCATCATTA AATCAAAATAAGGAAAACCT
Downstream 100 bases:
>100_bases GAAAATAGCATTCTCCCCCTTATGGGGGAGAATAATTTATCAAATGAAGGATTACCAAAATGTCAAAACAAATTAATGTG CCAGACATCGGTTCGGATGA
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 884; Mature: 883
Protein sequence:
>884_residues MSEIERDVDPFETKEWLESLDSLIRVEGVERAQYIIDQLLDQARTEGVPVQSGVTTAYVNTIPVSAQPAYPGDHKIERRI RSAVRWNAIAMVLRSQKKDLDLGGHISTFQSAATMYEVCYNHFFKAATEKNGGDLVFFQGHAAPGMYARAYVEGRLTEEQ LDNFRQEAFTDGLSSYPHPKLMPEFWQFSTVSMGLGPVNAIYQARFLKYLENRGLKDTADQKVYAFLGDGEMDEIESKGA LTFAAREKLDNLIFTVSCNLQRLDGPVNGNGKIIQELEGLFTGAGWEVIKVLWGGNWDKLFAKDTSGKLAQLMMEVVDGD YLTFKSKDGAYIREHFFGRYPETAALVADMTDDEIWDLRRGAHDSEKLYAAYAKAQKSDKPVVILAHQVKGYKIPEAESK NTAHQSKKMSLESLKGFRDYFELPLTDEQVESLEYIKFAEGSEEYNYIHGHRKALNGYVPARRAKFDVEYKVPALDEFKA LLAEQPRGISTTMAFTRALNILLKDKNIGKTIVPMIVDEARTFGMEGLFRQVGIYNPHGQNYTPSDRDLVAYYREAKDGQ VLQEGINELGGAASWVAAATSYSVSNQPMIPFFIYYSMFGFQRVGDMMWLAGDQLARGFMVGGTSGRTTLNGEGLQHEDG HSHIQAGIIPNCVTYDPSFAFEVAVIMQDGINRMYGEKQENVFYYMTTLNEVMEQPAMPEGAEEGIRKGLYKFETVKGKG KGNVQLLGSGSIMRHVREAAQILANDYGVTSDVFSAPSFNELAREGNDAVRWNLLHPTAEQRIPYVAQVLADLPTVASTD YVKQYADQIRAFVPSKHYHVLGTDGFGRSDSRANLREHFEVDARYVVVAALSQLAKEGTVETKVVADAIAKFGLNVDRIN PLYA
Sequences:
>Translated_884_residues MSEIERDVDPFETKEWLESLDSLIRVEGVERAQYIIDQLLDQARTEGVPVQSGVTTAYVNTIPVSAQPAYPGDHKIERRI RSAVRWNAIAMVLRSQKKDLDLGGHISTFQSAATMYEVCYNHFFKAATEKNGGDLVFFQGHAAPGMYARAYVEGRLTEEQ LDNFRQEAFTDGLSSYPHPKLMPEFWQFSTVSMGLGPVNAIYQARFLKYLENRGLKDTADQKVYAFLGDGEMDEIESKGA LTFAAREKLDNLIFTVSCNLQRLDGPVNGNGKIIQELEGLFTGAGWEVIKVLWGGNWDKLFAKDTSGKLAQLMMEVVDGD YLTFKSKDGAYIREHFFGRYPETAALVADMTDDEIWDLRRGAHDSEKLYAAYAKAQKSDKPVVILAHQVKGYKIPEAESK NTAHQSKKMSLESLKGFRDYFELPLTDEQVESLEYIKFAEGSEEYNYIHGHRKALNGYVPARRAKFDVEYKVPALDEFKA LLAEQPRGISTTMAFTRALNILLKDKNIGKTIVPMIVDEARTFGMEGLFRQVGIYNPHGQNYTPSDRDLVAYYREAKDGQ VLQEGINELGGAASWVAAATSYSVSNQPMIPFFIYYSMFGFQRVGDMMWLAGDQLARGFMVGGTSGRTTLNGEGLQHEDG HSHIQAGIIPNCVTYDPSFAFEVAVIMQDGINRMYGEKQENVFYYMTTLNEVMEQPAMPEGAEEGIRKGLYKFETVKGKG KGNVQLLGSGSIMRHVREAAQILANDYGVTSDVFSAPSFNELAREGNDAVRWNLLHPTAEQRIPYVAQVLADLPTVASTD YVKQYADQIRAFVPSKHYHVLGTDGFGRSDSRANLREHFEVDARYVVVAALSQLAKEGTVETKVVADAIAKFGLNVDRIN PLYA >Mature_883_residues SEIERDVDPFETKEWLESLDSLIRVEGVERAQYIIDQLLDQARTEGVPVQSGVTTAYVNTIPVSAQPAYPGDHKIERRIR SAVRWNAIAMVLRSQKKDLDLGGHISTFQSAATMYEVCYNHFFKAATEKNGGDLVFFQGHAAPGMYARAYVEGRLTEEQL DNFRQEAFTDGLSSYPHPKLMPEFWQFSTVSMGLGPVNAIYQARFLKYLENRGLKDTADQKVYAFLGDGEMDEIESKGAL TFAAREKLDNLIFTVSCNLQRLDGPVNGNGKIIQELEGLFTGAGWEVIKVLWGGNWDKLFAKDTSGKLAQLMMEVVDGDY LTFKSKDGAYIREHFFGRYPETAALVADMTDDEIWDLRRGAHDSEKLYAAYAKAQKSDKPVVILAHQVKGYKIPEAESKN TAHQSKKMSLESLKGFRDYFELPLTDEQVESLEYIKFAEGSEEYNYIHGHRKALNGYVPARRAKFDVEYKVPALDEFKAL LAEQPRGISTTMAFTRALNILLKDKNIGKTIVPMIVDEARTFGMEGLFRQVGIYNPHGQNYTPSDRDLVAYYREAKDGQV LQEGINELGGAASWVAAATSYSVSNQPMIPFFIYYSMFGFQRVGDMMWLAGDQLARGFMVGGTSGRTTLNGEGLQHEDGH SHIQAGIIPNCVTYDPSFAFEVAVIMQDGINRMYGEKQENVFYYMTTLNEVMEQPAMPEGAEEGIRKGLYKFETVKGKGK GNVQLLGSGSIMRHVREAAQILANDYGVTSDVFSAPSFNELAREGNDAVRWNLLHPTAEQRIPYVAQVLADLPTVASTDY VKQYADQIRAFVPSKHYHVLGTDGFGRSDSRANLREHFEVDARYVVVAALSQLAKEGTVETKVVADAIAKFGLNVDRINP LYA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=888, Percent_Identity=67.9054054054054, Blast_Score=1301, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 98920; Mature: 98789
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIERDVDPFETKEWLESLDSLIRVEGVERAQYIIDQLLDQARTEGVPVQSGVTTAYVN CCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE TIPVSAQPAYPGDHKIERRIRSAVRWNAIAMVLRSQKKDLDLGGHISTFQSAATMYEVCY EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH NHFFKAATEKNGGDLVFFQGHAAPGMYARAYVEGRLTEEQLDNFRQEAFTDGLSSYPHPK HHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC LMPEFWQFSTVSMGLGPVNAIYQARFLKYLENRGLKDTADQKVYAFLGDGEMDEIESKGA CCHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHCCCC LTFAAREKLDNLIFTVSCNLQRLDGPVNGNGKIIQELEGLFTGAGWEVIKVLWGGNWDKL EEHHHHHHHCCEEEEEEECCEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHE FAKDTSGKLAQLMMEVVDGDYLTFKSKDGAYIREHFFGRYPETAALVADMTDDEIWDLRR EECCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCHHHHEECCCCHHHHHHHC GAHDSEKLYAAYAKAQKSDKPVVILAHQVKGYKIPEAESKNTAHQSKKMSLESLKGFRDY CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FELPLTDEQVESLEYIKFAEGSEEYNYIHGHRKALNGYVPARRAKFDVEYKVPALDEFKA HCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHH LLAEQPRGISTTMAFTRALNILLKDKNIGKTIVPMIVDEARTFGMEGLFRQVGIYNPHGQ HHHCCCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCC NYTPSDRDLVAYYREAKDGQVLQEGINELGGAASWVAAATSYSVSNQPMIPFFIYYSMFG CCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH FQRVGDMMWLAGDQLARGFMVGGTSGRTTLNGEGLQHEDGHSHIQAGIIPNCVTYDPSFA HHHHHHHHHHCCHHHHCCEEEECCCCCEEECCCCCCCCCCCCCEECCCCCCCEECCCCHH FEVAVIMQDGINRMYGEKQENVFYYMTTLNEVMEQPAMPEGAEEGIRKGLYKFETVKGKG HHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCC KGNVQLLGSGSIMRHVREAAQILANDYGVTSDVFSAPSFNELAREGNDAVRWNLLHPTAE CCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHCCCCEEEEEEECCCHH QRIPYVAQVLADLPTVASTDYVKQYADQIRAFVPSKHYHVLGTDGFGRSDSRANLREHFE HCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHH VDARYVVVAALSQLAKEGTVETKVVADAIAKFGLNVDRINPLYA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCC >Mature Secondary Structure SEIERDVDPFETKEWLESLDSLIRVEGVERAQYIIDQLLDQARTEGVPVQSGVTTAYVN CCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE TIPVSAQPAYPGDHKIERRIRSAVRWNAIAMVLRSQKKDLDLGGHISTFQSAATMYEVCY EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH NHFFKAATEKNGGDLVFFQGHAAPGMYARAYVEGRLTEEQLDNFRQEAFTDGLSSYPHPK HHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC LMPEFWQFSTVSMGLGPVNAIYQARFLKYLENRGLKDTADQKVYAFLGDGEMDEIESKGA CCHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHCCCC LTFAAREKLDNLIFTVSCNLQRLDGPVNGNGKIIQELEGLFTGAGWEVIKVLWGGNWDKL EEHHHHHHHCCEEEEEEECCEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHE FAKDTSGKLAQLMMEVVDGDYLTFKSKDGAYIREHFFGRYPETAALVADMTDDEIWDLRR EECCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCHHHHEECCCCHHHHHHHC GAHDSEKLYAAYAKAQKSDKPVVILAHQVKGYKIPEAESKNTAHQSKKMSLESLKGFRDY CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH FELPLTDEQVESLEYIKFAEGSEEYNYIHGHRKALNGYVPARRAKFDVEYKVPALDEFKA HCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHH LLAEQPRGISTTMAFTRALNILLKDKNIGKTIVPMIVDEARTFGMEGLFRQVGIYNPHGQ HHHCCCCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCC NYTPSDRDLVAYYREAKDGQVLQEGINELGGAASWVAAATSYSVSNQPMIPFFIYYSMFG CCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHH FQRVGDMMWLAGDQLARGFMVGGTSGRTTLNGEGLQHEDGHSHIQAGIIPNCVTYDPSFA HHHHHHHHHHCCHHHHCCEEEECCCCCEEECCCCCCCCCCCCCEECCCCCCCEECCCCHH FEVAVIMQDGINRMYGEKQENVFYYMTTLNEVMEQPAMPEGAEEGIRKGLYKFETVKGKG HHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCC KGNVQLLGSGSIMRHVREAAQILANDYGVTSDVFSAPSFNELAREGNDAVRWNLLHPTAE CCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHCCCCEEEEEEECCCHH QRIPYVAQVLADLPTVASTDYVKQYADQIRAFVPSKHYHVLGTDGFGRSDSRANLREHFE HCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHH VDARYVVVAALSQLAKEGTVETKVVADAIAKFGLNVDRINPLYA CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]