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The map label for this gene is yafE [C]

Identifier: 126208240

GI number: 126208240

Start: 871328

End: 872083

Strand: Direct

Name: yafE [C]

Synonym: APL_0762

Alternate gene names: 126208240

Gene position: 871328-872083 (Clockwise)

Preceding gene: 126208238

Following gene: 126208241

Centisome position: 38.31

GC content: 39.15

Gene sequence:

>756_bases
ATGAAGAAAGATGAAATAGGACATAATTTCTTATCTCGTTTAGGAAAAACGCGATTACGTCCAGGCGGTAAGCTGGCAAC
CGATTGGTTAATTGCCAACGCTGATTTTAATCCTAATAAAAAAGTCTTGGAAGTGGCATGCAATATGTGTACCACTGCAA
TACAAATTGCTAAACAGTACGGTTGCCATATTACAGGGATTGATCTGGACGAAGAAGCCTTAGATAAAGCGCGCAGTAAT
ATAAAAGAAAATAACTTGGAAGACTTCATTCAAGTTCAACGTGCAAATGCGACCAAATTACCTTTTGAAGACAACAGTTT
TGATATTGTCATCAATGAAGCGATGCTGACTATGCTTCCTCTTGAAGCTAAAGAGAAAGCGATTCGTGAATATTTCAGAG
TCTTAAAACCGGGCGGTTTTTTACTCACTCACGATGTGATGTTACAAAATGACGATGCGGAACAAGTTTTAGTCGCTTTA
CGTGAAGCGATTAACGTTAGTGTAACGCCGCTTACTAAAGAAGGGTGGAAAAACACTTTCCATCAATGCGGTTTCCGTAA
TGTCGATGTATTTTCAGGAGAGATTACGCTGCTTTCGCCGAAAGGTCTGATCTACGACGAAGGCGTTTTAGGTGCAATGA
AAATCGTCGGTAATGCGCTAAAACCCGAAAACCGTGAAACATTCAAAAAAATGTTCCAAACCTTTAATAATCCTGAACAT
AAACTAGGCTTTGTTGCAGTTTGTAGCCAAAAATAA

Upstream 100 bases:

>100_bases
TCTTTGTATATAAGAAAACTGAAATTTTCTGTATAATCATTCGCAATATCCGTGTGAAGCGGTCACATTTTAGGACAATT
TTACAAATTCCGGAGTTTCT

Downstream 100 bases:

>100_bases
GTAAAAAATCCTTCTTTGGCATAGAAGGATTTTTCAGCAATATAATGAAGGAAAAACAATGTTCGAGATGTTCCAATCTT
GGTATAAGCAAAAATTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKKDEIGHNFLSRLGKTRLRPGGKLATDWLIANADFNPNKKVLEVACNMCTTAIQIAKQYGCHITGIDLDEEALDKARSN
IKENNLEDFIQVQRANATKLPFEDNSFDIVINEAMLTMLPLEAKEKAIREYFRVLKPGGFLLTHDVMLQNDDAEQVLVAL
REAINVSVTPLTKEGWKNTFHQCGFRNVDVFSGEITLLSPKGLIYDEGVLGAMKIVGNALKPENRETFKKMFQTFNNPEH
KLGFVAVCSQK

Sequences:

>Translated_251_residues
MKKDEIGHNFLSRLGKTRLRPGGKLATDWLIANADFNPNKKVLEVACNMCTTAIQIAKQYGCHITGIDLDEEALDKARSN
IKENNLEDFIQVQRANATKLPFEDNSFDIVINEAMLTMLPLEAKEKAIREYFRVLKPGGFLLTHDVMLQNDDAEQVLVAL
REAINVSVTPLTKEGWKNTFHQCGFRNVDVFSGEITLLSPKGLIYDEGVLGAMKIVGNALKPENRETFKKMFQTFNNPEH
KLGFVAVCSQK
>Mature_251_residues
MKKDEIGHNFLSRLGKTRLRPGGKLATDWLIANADFNPNKKVLEVACNMCTTAIQIAKQYGCHITGIDLDEEALDKARSN
IKENNLEDFIQVQRANATKLPFEDNSFDIVINEAMLTMLPLEAKEKAIREYFRVLKPGGFLLTHDVMLQNDDAEQVLVAL
REAINVSVTPLTKEGWKNTFHQCGFRNVDVFSGEITLLSPKGLIYDEGVLGAMKIVGNALKPENRETFKKMFQTFNNPEH
KLGFVAVCSQK

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28216; Mature: 28216

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDEIGHNFLSRLGKTRLRPGGKLATDWLIANADFNPNKKVLEVACNMCTTAIQIAKQY
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
GCHITGIDLDEEALDKARSNIKENNLEDFIQVQRANATKLPFEDNSFDIVINEAMLTMLP
CCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHCC
LEAKEKAIREYFRVLKPGGFLLTHDVMLQNDDAEQVLVALREAINVSVTPLTKEGWKNTF
CHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCEECCCCHHHHHHHH
HQCGFRNVDVFSGEITLLSPKGLIYDEGVLGAMKIVGNALKPENRETFKKMFQTFNNPEH
HHCCCCCCEEECCEEEEECCCCCEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
KLGFVAVCSQK
CEEEEEEECCC
>Mature Secondary Structure
MKKDEIGHNFLSRLGKTRLRPGGKLATDWLIANADFNPNKKVLEVACNMCTTAIQIAKQY
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
GCHITGIDLDEEALDKARSNIKENNLEDFIQVQRANATKLPFEDNSFDIVINEAMLTMLP
CCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHHCC
LEAKEKAIREYFRVLKPGGFLLTHDVMLQNDDAEQVLVALREAINVSVTPLTKEGWKNTF
CHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHCCEECCCCHHHHHHHH
HQCGFRNVDVFSGEITLLSPKGLIYDEGVLGAMKIVGNALKPENRETFKKMFQTFNNPEH
HHCCCCCCEEECCEEEEECCCCCEECCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCC
KLGFVAVCSQK
CEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]