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The map label for this gene is 126208152

Identifier: 126208152

GI number: 126208152

Start: 766607

End: 767197

Strand: Reverse

Name: 126208152

Synonym: APL_0672

Alternate gene names: NA

Gene position: 767197-766607 (Counterclockwise)

Preceding gene: 126208153

Following gene: 126208151

Centisome position: 33.73

GC content: 42.13

Gene sequence:

>591_bases
ATGCAACAACCTTTAGAACATCATCCGTTTCAACCTGTGCTACCGACCTCCGCAACCGTAGTGATGATGGGGACTTTTCC
GCCGACAGGCGAAAAACGCTGTATGGAATTTCATTACCCGAATTTCCAAAATGATATGTGGCGTATTATGGGCGCGGTTT
TCTATGATGATACCGACCATTTCCGTGTCGGCGATGAAAAACGTTTTGATCCGATAAAAATCGAAGCGTTTTTACGAGAA
AAGGGCATTGCGTTGTGTTCATCGGCACAAACGGCAATTCGTTTAAAGGGTAACGCTTCGGATAAGGATTTAAAAATCGT
TGAACCGGTGGATATGTCGCAATTATTAAAAACGTTACCCCATGTAAAATGGATTTTTACTACCGGCGGTTTGGCAACAG
ATACGTTACTCGGTTTATTAAATGAGAAAATTAAAGCGCCGAAAACAAACGAATGGATTCACTATCCGCACTGTGCCGAG
CGTGAACTTTTCCTTTACCGTTTGCCTTCTACCTCTCGGGCTTATCCATTGAGTTTAGCTAAGAAAATTGAGGCGTACCG
ACAATTTTTTATTCAAGCAGGATTACTTTAA

Upstream 100 bases:

>100_bases
CTAGTTTCAGCCTTAAACCAAGTGGCGGAACAGGGTATGGATAAAGCGGCGAAGTTGGAAATGCTAAAGGCATTAATTAA
ATAAGTGGGAGAAAACGGCT

Downstream 100 bases:

>100_bases
CGCATGAAATATGATTTACATTCACACAGTACCGCATCGGACGGTATGCTTAGCCCGACCGAGTTGGTTCAGCGTGCGTT
AGAGCAACAAATAGAAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: GT/U Mismatch-Specific DNA Glycosylase; DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MQQPLEHHPFQPVLPTSATVVMMGTFPPTGEKRCMEFHYPNFQNDMWRIMGAVFYDDTDHFRVGDEKRFDPIKIEAFLRE
KGIALCSSAQTAIRLKGNASDKDLKIVEPVDMSQLLKTLPHVKWIFTTGGLATDTLLGLLNEKIKAPKTNEWIHYPHCAE
RELFLYRLPSTSRAYPLSLAKKIEAYRQFFIQAGLL

Sequences:

>Translated_196_residues
MQQPLEHHPFQPVLPTSATVVMMGTFPPTGEKRCMEFHYPNFQNDMWRIMGAVFYDDTDHFRVGDEKRFDPIKIEAFLRE
KGIALCSSAQTAIRLKGNASDKDLKIVEPVDMSQLLKTLPHVKWIFTTGGLATDTLLGLLNEKIKAPKTNEWIHYPHCAE
RELFLYRLPSTSRAYPLSLAKKIEAYRQFFIQAGLL
>Mature_196_residues
MQQPLEHHPFQPVLPTSATVVMMGTFPPTGEKRCMEFHYPNFQNDMWRIMGAVFYDDTDHFRVGDEKRFDPIKIEAFLRE
KGIALCSSAQTAIRLKGNASDKDLKIVEPVDMSQLLKTLPHVKWIFTTGGLATDTLLGLLNEKIKAPKTNEWIHYPHCAE
RELFLYRLPSTSRAYPLSLAKKIEAYRQFFIQAGLL

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22512; Mature: 22512

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQPLEHHPFQPVLPTSATVVMMGTFPPTGEKRCMEFHYPNFQNDMWRIMGAVFYDDTDH
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHEECCCCC
FRVGDEKRFDPIKIEAFLREKGIALCSSAQTAIRLKGNASDKDLKIVEPVDMSQLLKTLP
EECCCCCCCCCCHHHHHHHHCCHHEECCCCEEEEEECCCCCCCEEEECCCCHHHHHHHCC
HVKWIFTTGGLATDTLLGLLNEKIKAPKTNEWIHYPHCAERELFLYRLPSTSRAYPLSLA
CEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEEEECCCCCCCCHHHHH
KKIEAYRQFFIQAGLL
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQQPLEHHPFQPVLPTSATVVMMGTFPPTGEKRCMEFHYPNFQNDMWRIMGAVFYDDTDH
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHEECCCCC
FRVGDEKRFDPIKIEAFLREKGIALCSSAQTAIRLKGNASDKDLKIVEPVDMSQLLKTLP
EECCCCCCCCCCHHHHHHHHCCHHEECCCCEEEEEECCCCCCCEEEECCCCHHHHHHHCC
HVKWIFTTGGLATDTLLGLLNEKIKAPKTNEWIHYPHCAERELFLYRLPSTSRAYPLSLA
CEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCEEEEEECCCCCCCCHHHHH
KKIEAYRQFFIQAGLL
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA