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The map label for this gene is sspB [H]

Identifier: 126208137

GI number: 126208137

Start: 751608

End: 752024

Strand: Reverse

Name: sspB [H]

Synonym: APL_0657

Alternate gene names: 126208137

Gene position: 752024-751608 (Counterclockwise)

Preceding gene: 126208138

Following gene: 126208135

Centisome position: 33.06

GC content: 40.53

Gene sequence:

>417_bases
ATGAAACCTTTGCGCCCTTATCTTTACCACGCGTACTACAACTGGATTTTAGATAACGATAATACGCCTTATTTATTAGT
AAATGCGGAATATCCGGATGTGGATGTGCCGGTCGAATTTGTTCGGGACGGCAAAATTATTTTGAATATCGCACCGCGTT
CCATCGGACAATATGTGATTAATGACGAGTCAATCAGCTTTAATGCTCGTTTCCAAGGGATGTTGCGTGATATTTATATT
CCTTTTGGTGCAACGGAAGCCATTTATGCGCAAGAAACCGGCGACGGAATTATGTTCCAAGACGAGGCTTATTATAGTGA
ACAAGCATATAGCGAAAGGGTTAATCAGCAAGCCGACAGAGAAGAAAGTAAGCCTAAAGCTAAGAAAAAACCGACACATT
TGAAATTAGTCAAATAG

Upstream 100 bases:

>100_bases
AGGCAATTAAAACCTATATGACTCGCGTATTCCAACGTGAGAGCTTCGTTCAGTCTATCGGCGGTGCGGCTCCGAAACAC
TTAATGGATGATAAAGACTA

Downstream 100 bases:

>100_bases
ATAAATAAGCGGTTAAATTTCTTAAGTTATTTGCAAATATGTTCCGAACAAAAAAATACCACTATTAGAAAATAGTGGTA
TTTTTGTTTTTATAAGGCTT

Product: ClpXP protease specificity-enhancing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKPLRPYLYHAYYNWILDNDNTPYLLVNAEYPDVDVPVEFVRDGKIILNIAPRSIGQYVINDESISFNARFQGMLRDIYI
PFGATEAIYAQETGDGIMFQDEAYYSEQAYSERVNQQADREESKPKAKKKPTHLKLVK

Sequences:

>Translated_138_residues
MKPLRPYLYHAYYNWILDNDNTPYLLVNAEYPDVDVPVEFVRDGKIILNIAPRSIGQYVINDESISFNARFQGMLRDIYI
PFGATEAIYAQETGDGIMFQDEAYYSEQAYSERVNQQADREESKPKAKKKPTHLKLVK
>Mature_138_residues
MKPLRPYLYHAYYNWILDNDNTPYLLVNAEYPDVDVPVEFVRDGKIILNIAPRSIGQYVINDESISFNARFQGMLRDIYI
PFGATEAIYAQETGDGIMFQDEAYYSEQAYSERVNQQADREESKPKAKKKPTHLKLVK

Specific function: Seems to act in concert with sspA in the regulation of several proteins during exponential and stationary-phase growth. The exact function of sspB is not yet known [H]

COG id: COG2969

COG function: function code R; Stringent starvation protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789623, Length=107, Percent_Identity=49.5327102803738, Blast_Score=122, Evalue=6e-30,

Paralogues:

None

Copy number: 297 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007481 [H]

Pfam domain/function: PF04386 SspB [H]

EC number: NA

Molecular weight: Translated: 16046; Mature: 16046

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLRPYLYHAYYNWILDNDNTPYLLVNAEYPDVDVPVEFVRDGKIILNIAPRSIGQYVI
CCCCHHHHEEEEEEEEECCCCCCEEEEECCCCCCCCCCEEECCCEEEEEECCCCCCCEEE
NDESISFNARFQGMLRDIYIPFGATEAIYAQETGDGIMFQDEAYYSEQAYSERVNQQADR
CCCCEEECHHHHEEEEEEEECCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHH
EESKPKAKKKPTHLKLVK
HHCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKPLRPYLYHAYYNWILDNDNTPYLLVNAEYPDVDVPVEFVRDGKIILNIAPRSIGQYVI
CCCCHHHHEEEEEEEEECCCCCCEEEEECCCCCCCCCCEEECCCEEEEEECCCCCCCEEE
NDESISFNARFQGMLRDIYIPFGATEAIYAQETGDGIMFQDEAYYSEQAYSERVNQQADR
CCCCEEECHHHHEEEEEEEECCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHH
EESKPKAKKKPTHLKLVK
HHCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]