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The map label for this gene is ybgI [C]

Identifier: 126208107

GI number: 126208107

Start: 712379

End: 713152

Strand: Reverse

Name: ybgI [C]

Synonym: APL_0625

Alternate gene names: 126208107

Gene position: 713152-712379 (Counterclockwise)

Preceding gene: 126208108

Following gene: 126208105

Centisome position: 31.35

GC content: 41.86

Gene sequence:

>774_bases
ATGGGACTGTCGAATCTCGAACTTGAACAAATTATTGATGAAAAATTAAATAGCAAAGCGATTACAGACTACGCACCGAA
CGGCTTGCAAGTGGAAGGTAAGACGCATATTCAACGAATTATTACCGGCGTGACCGCAAGTCTGCCGCTAATTGAAAAAG
CGATAGAGAAAAAGGCCGATGCGATTTTGGTACATCACGGTTATTTTTGGAAAAGCGAATCGCCTTGCATTCGCGGAATG
AAAGGTAAACGCATCAAACAATTACTCGTAAATGACATTAATTTATTCGGTTATCATCTGCCGTTGGATATTCATTCGGA
ATTAGGCAATAACGCCCAATTGGCGAAAAAATTAGGTGTAATTAACTTACAAGGTTTAGAAGACCGTCCGAATTCAATTC
CGGTATATGGTGAGTTGGAAACCCCAATTTCCGCACAAGATCTAGAGAACCGTATTGAAACCGTACTTAATCGCAAACCG
ATTTTATGCGATGAATTTATTGCAGACTATCCGCATAAATTAATTCGCAAAGTCGGTATTTGTACCGGTGGCGGGCAAGG
TTATATTGATTTAGCGGCAAGTAAGGGCTGTGATGCGTTTATTTCCGGCGAAATTTCAGAGCAAACGACCCATTCCGCCC
GTGAACAAGGCATTTATTACTTCGCTTGCGGACACCACGCAACAGAACGAGACGGTGTAAAAGCACTGGGAGAATGGCTG
GCAAAAGAATATGGCTTAGACGTGGAATTTATTGATATTGATAATCCGGCGTAA

Upstream 100 bases:

>100_bases
CAAGAGTAATTCATTCACGACAAGCGGTTGAATTTAGCGTTAAATTTGCAAATTTTGCATAAATTTTAACCGCTTGTTTT
TCTTAAAAAAAGGAATAAAA

Downstream 100 bases:

>100_bases
TCTTTGAAAAAACCTAAAATGCAAAAGTCGTATCGGAAAAGATACGACTTTTTTACTGGGATTTAATCTTCAGATAAACG
AGAAATATCGTGATAAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MGLSNLELEQIIDEKLNSKAITDYAPNGLQVEGKTHIQRIITGVTASLPLIEKAIEKKADAILVHHGYFWKSESPCIRGM
KGKRIKQLLVNDINLFGYHLPLDIHSELGNNAQLAKKLGVINLQGLEDRPNSIPVYGELETPISAQDLENRIETVLNRKP
ILCDEFIADYPHKLIRKVGICTGGGQGYIDLAASKGCDAFISGEISEQTTHSAREQGIYYFACGHHATERDGVKALGEWL
AKEYGLDVEFIDIDNPA

Sequences:

>Translated_257_residues
MGLSNLELEQIIDEKLNSKAITDYAPNGLQVEGKTHIQRIITGVTASLPLIEKAIEKKADAILVHHGYFWKSESPCIRGM
KGKRIKQLLVNDINLFGYHLPLDIHSELGNNAQLAKKLGVINLQGLEDRPNSIPVYGELETPISAQDLENRIETVLNRKP
ILCDEFIADYPHKLIRKVGICTGGGQGYIDLAASKGCDAFISGEISEQTTHSAREQGIYYFACGHHATERDGVKALGEWL
AKEYGLDVEFIDIDNPA
>Mature_256_residues
GLSNLELEQIIDEKLNSKAITDYAPNGLQVEGKTHIQRIITGVTASLPLIEKAIEKKADAILVHHGYFWKSESPCIRGMK
GKRIKQLLVNDINLFGYHLPLDIHSELGNNAQLAKKLGVINLQGLEDRPNSIPVYGELETPISAQDLENRIETVLNRKPI
LCDEFIADYPHKLIRKVGICTGGGQGYIDLAASKGCDAFISGEISEQTTHSAREQGIYYFACGHHATERDGVKALGEWLA
KEYGLDVEFIDIDNPA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=255, Percent_Identity=58.4313725490196, Blast_Score=306, Evalue=8e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 28405; Mature: 28274

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSNLELEQIIDEKLNSKAITDYAPNGLQVEGKTHIQRIITGVTASLPLIEKAIEKKAD
CCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
AILVHHGYFWKSESPCIRGMKGKRIKQLLVNDINLFGYHLPLDIHSELGNNAQLAKKLGV
EEEEECCEEECCCCHHHCCCCHHHHHHHHHHHHHHEEEECCEEEHHHCCCCHHHHHHHCC
INLQGLEDRPNSIPVYGELETPISAQDLENRIETVLNRKPILCDEFIADYPHKLIRKVGI
EEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
CTGGGQGYIDLAASKGCDAFISGEISEQTTHSAREQGIYYFACGHHATERDGVKALGEWL
CCCCCCCEEEEECCCCCCEEECCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHH
AKEYGLDVEFIDIDNPA
HHHHCCCEEEEECCCCC
>Mature Secondary Structure 
GLSNLELEQIIDEKLNSKAITDYAPNGLQVEGKTHIQRIITGVTASLPLIEKAIEKKAD
CCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
AILVHHGYFWKSESPCIRGMKGKRIKQLLVNDINLFGYHLPLDIHSELGNNAQLAKKLGV
EEEEECCEEECCCCHHHCCCCHHHHHHHHHHHHHHEEEECCEEEHHHCCCCHHHHHHHCC
INLQGLEDRPNSIPVYGELETPISAQDLENRIETVLNRKPILCDEFIADYPHKLIRKVGI
EEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
CTGGGQGYIDLAASKGCDAFISGEISEQTTHSAREQGIYYFACGHHATERDGVKALGEWL
CCCCCCCEEEEECCCCCCEEECCCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHH
AKEYGLDVEFIDIDNPA
HHHHCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]