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The map label for this gene is yaaA [C]

Identifier: 126208084

GI number: 126208084

Start: 688546

End: 689328

Strand: Direct

Name: yaaA [C]

Synonym: APL_0602

Alternate gene names: 126208084

Gene position: 688546-689328 (Clockwise)

Preceding gene: 126208083

Following gene: 126208085

Centisome position: 30.27

GC content: 40.74

Gene sequence:

>783_bases
ATGTTAGCCATTATTTCTCCTGCAAAAACATTAGATTTTGAAACGCCCGCACCTAATTTCCCATTTGCAAATTCTCAACC
GAAATTAACCGCTTATAGCCAACAACTGATTGATATCTGTAAACAATTCTCGCCGGCGGAATTAGGTTCTTTAATGTCTA
TTAGCGATAAACTCGCGAGTCTGAATGTAGCCCGTTTTGCCGAATGGCAATTAGAACATAACGAACAAAATTCTAAAGCG
GCTTTATTTGCGTTTAAAGGCGATGTTTATACCGGGCTGGATGCGGAAACCCTTACTCAAGCACAAGTAGAATATGCACG
GGTTCATTTACGTATGCTATCTGGCTTATATGGATTACTCAAACCGCTGGATTTAATGCAGCCATACCGCTTAGAAATGG
GAACGAAGTTAGTTAATCCGAAAGGCAAAGATCTTTATGCGTTTTGGGGCGATATTATTACTCAACATTTACAAACGGCG
ATGGATGAACAAGGCGATAATATCTTAGTGAACCTTGCTTCTGACGAGTATTACGGTGCGGTGAAGCCACAAAAACTACA
GGCAACCATTATTAAACCGGTATTCTTAGATGAGAAAAACGGCAAGTTTAAGCAAATCAGTTTTTATGCGAAAAAAGCGC
GCGGTATGATGGTACGTTTTATTTTAGAAACGCAGCCGACTAGCGTGGAACAATTAAAAGCCTTTAATTACGGCAGCTAT
TGGTTTGATGAAGATGCTTCCGGCGCAACGGAATTGGTCTTTAAACGTGAGGAGCAAGCGTAA

Upstream 100 bases:

>100_bases
GAAAGTATTATCAGCAGAAGGCAGGATTATTCCTGCCTTTTCTGTTTTTATCGTCTGACAAGTGCTAAAATAAGCTAAAT
TTTTAACCAAGGTATTTTTT

Downstream 100 bases:

>100_bases
TGCGTTGGCTTTTTCTTGCAGGATTTTCACTGTTTTTAACCGCTTGCGGCTTAACGCAAAAACAATTCGATTTGCCTGAA
AAAGTGGATTTTCAAGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLAIISPAKTLDFETPAPNFPFANSQPKLTAYSQQLIDICKQFSPAELGSLMSISDKLASLNVARFAEWQLEHNEQNSKA
ALFAFKGDVYTGLDAETLTQAQVEYARVHLRMLSGLYGLLKPLDLMQPYRLEMGTKLVNPKGKDLYAFWGDIITQHLQTA
MDEQGDNILVNLASDEYYGAVKPQKLQATIIKPVFLDEKNGKFKQISFYAKKARGMMVRFILETQPTSVEQLKAFNYGSY
WFDEDASGATELVFKREEQA

Sequences:

>Translated_260_residues
MLAIISPAKTLDFETPAPNFPFANSQPKLTAYSQQLIDICKQFSPAELGSLMSISDKLASLNVARFAEWQLEHNEQNSKA
ALFAFKGDVYTGLDAETLTQAQVEYARVHLRMLSGLYGLLKPLDLMQPYRLEMGTKLVNPKGKDLYAFWGDIITQHLQTA
MDEQGDNILVNLASDEYYGAVKPQKLQATIIKPVFLDEKNGKFKQISFYAKKARGMMVRFILETQPTSVEQLKAFNYGSY
WFDEDASGATELVFKREEQA
>Mature_260_residues
MLAIISPAKTLDFETPAPNFPFANSQPKLTAYSQQLIDICKQFSPAELGSLMSISDKLASLNVARFAEWQLEHNEQNSKA
ALFAFKGDVYTGLDAETLTQAQVEYARVHLRMLSGLYGLLKPLDLMQPYRLEMGTKLVNPKGKDLYAFWGDIITQHLQTA
MDEQGDNILVNLASDEYYGAVKPQKLQATIIKPVFLDEKNGKFKQISFYAKKARGMMVRFILETQPTSVEQLKAFNYGSY
WFDEDASGATELVFKREEQA

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family [H]

Homologues:

Organism=Escherichia coli, GI1786187, Length=259, Percent_Identity=60.2316602316602, Blast_Score=322, Evalue=1e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005583 [H]

Pfam domain/function: PF03883 DUF328 [H]

EC number: NA

Molecular weight: Translated: 29330; Mature: 29330

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIISPAKTLDFETPAPNFPFANSQPKLTAYSQQLIDICKQFSPAELGSLMSISDKLAS
CEEEECCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LNVARFAEWQLEHNEQNSKAALFAFKGDVYTGLDAETLTQAQVEYARVHLRMLSGLYGLL
HHHHHHHHHHHHCCCCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KPLDLMQPYRLEMGTKLVNPKGKDLYAFWGDIITQHLQTAMDEQGDNILVNLASDEYYGA
HHHHHCCCHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
VKPQKLQATIIKPVFLDEKNGKFKQISFYAKKARGMMVRFILETQPTSVEQLKAFNYGSY
CCCCHHHHEEECEEEEECCCCCEEEHHHHHHHHCCEEEEEEEECCCCCHHHHHHCCCCCE
WFDEDASGATELVFKREEQA
ECCCCCCCHHHHHEECCCCC
>Mature Secondary Structure
MLAIISPAKTLDFETPAPNFPFANSQPKLTAYSQQLIDICKQFSPAELGSLMSISDKLAS
CEEEECCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LNVARFAEWQLEHNEQNSKAALFAFKGDVYTGLDAETLTQAQVEYARVHLRMLSGLYGLL
HHHHHHHHHHHHCCCCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KPLDLMQPYRLEMGTKLVNPKGKDLYAFWGDIITQHLQTAMDEQGDNILVNLASDEYYGA
HHHHHCCCHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
VKPQKLQATIIKPVFLDEKNGKFKQISFYAKKARGMMVRFILETQPTSVEQLKAFNYGSY
CCCCHHHHEEECEEEEECCCCCEEEHHHHHHHHCCEEEEEEEECCCCCHHHHHHCCCCCE
WFDEDASGATELVFKREEQA
ECCCCCCCHHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA