| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is glnD [H]
Identifier: 126208080
GI number: 126208080
Start: 684296
End: 686848
Strand: Direct
Name: glnD [H]
Synonym: APL_0598
Alternate gene names: 126208080
Gene position: 684296-686848 (Clockwise)
Preceding gene: 126208079
Following gene: 126208082
Centisome position: 30.09
GC content: 41.44
Gene sequence:
>2553_bases ATGAATATTGATGTTAAGTCACAACTTGCCGAGTTTAATACGAAACAATGTCACGATTTTTCCCAAGAAGACGTTTTTGA ACTGATTTATCAACGCAGTGATTTTTATGACGAATTACTTGTTAGCTTGTGGCGTCAGTTCGGTTTTGAGAAACGTAGCG ATATGGCATTGATCGCGGTCGGAGGATACGGCAGACGAGAAATGTTCCCGCTTTCCGACGTAGATATATTGGTGCTAACG GAACAGAGTGTCGATGAGGAAACCGCGGAAAAACTTAACGCATTATTTAATGTATTGTGGGATTGTAAATTACAAGTCGG TGCGAGTATTCGTACGCTTTTCGAATCCCTAGATATCGGTCGCGAAGAAATTTCGGTGGCAACCAATATTTATGAAGGGC GTTTTCTAACCGGTAATAAAAAATTATGGACGGCATTAGTCGAGCAAATTTATCAAGCCGACTATTGGCCGATAGAAGCT TTTTTTCAAGCTAAAATCGAAGAAAAGAATGAACGTTACGCCCGTTATCATAATACCAGCTATAACTTAGAGCCGGATCT CAAACATAGCCCGGGCGGACTGCGTGATCTGCATTTGGTTTCTTGGATCTTTTTACGTCATTTCGGAACCTACTCCTTCG AAAGCCTATTGAATAAAGGCATTTTATTTGCGGAAGAGTTTAAGGAGTTGAATAGCGCGCAAGCGGTATTATTCCGTATG CGTTTTGCCTTACATCTGCAGCTCAAGCGTTACGACAATCGCCTACGCTTTGATCGCCAATTGCAATTGAGCGAGTTGCT TGGTTATCAAGGCGAAGGAAATCAGCCGGTCGAAGCGATGATGAAATCGTATTTCCAAGCGACTCAAACGATTTCTCAAT TAAGTCAATTATTACTGAACAGTTTTGAGCAACAAGTATTACGACCGCAAAATAATTTGGAAAAACAACCGCTTGATCAA CATTTTTATCTACAAGGATCGGAAATTTATTGCCAAGATCGTAGATGCTTTACTCACACGCCGGCATCAATTTTGGATTT ATTCTTTTATTTAACGCAATATCCCGATGCGAAAGCAAGTGCAACGATGTTAAGACATCTGCGTTTGTCATTACATAAAC TCGGGCAACCGTTAAGCGAATTACCTGAAGCAAGAACACGTTTTATTCGTTTATTTGAACAACCGAATGTAGTTAAAAAG GCGATCGTACCTATGCATCAATTAGGCGTATTAACCGCCTATTTGCCGCAGTGGCGACATATTGTCGGCTTAATGCAGTT TGATTTGTTCCATATCTATACGGTAGATGAGCATACGATCCGCGTAATGCTAAAAATCGAAAGCTTTTTAGATGCGGAAA CAACGGAACAACATCCGCTTTGTTGCCAATATTTTACCGCTTGTCAGCATAAACCGTTACTTTATTTAGCCGCATTATTC CACGATATAGCGAAAGGGCGAGAAAGCGATCATGCAGAAGTCGGCGCATTAGATATGGAACAATTTGCGCTACAACACGG TTTTGATCCGATGCAGGTTACGAAAATGGTGTGGTTGGTACGCGAGCATTTAACTATGTCGATTACCGCACAACGCCGCG ATATTCATGATCCGTTTGTGATTAAAGCCTTTGCCGAAAAGGTAGAAAATCGGACCGCTTTATCGGATTTGATGTGTTTA ACCGTCGCCGATATTTGTGCGACTAACGAAACGCTTTGGAACGATTGGAAGCGGTCGCTTTTCGCTCAACTTTTTCAATT TACCAATCAGCAACTGACGAAATCGCTTGATTACCGTAAAGAAGCCGAAACGAACCGCCAACAAGCATTGGAATTGATTA AATTTGCCTTAAAACCGGATGAACGAACCCGCTTGCAGCAATTCTGGCAAGTCTGTCCGGACAGTTATTTTTTACGCCAT AAACCGAAACAATTGGTTTGGCACGCGTTAGCTTATCTTAAACAACGGATAATGCCGTTAGTGCTGGTAAGTAACGAATA TGCCAGAGGCGCAACCGAAATTTTTATTTATTGCGAGGATCAAGCCCAGCTTTTTTTACGAATCGCACAGATATTAAGCC AGAAAAAAGTCAGTATTCATGACGCACAAATTATTACCAGTCAAAACGGGTTGGTTTTAGATAGTTTTATTGTGACGGAA TTAAACGGTAAACCGCTTGAGGAAATGCGTTGCGAGCAAATTAAGCAATCGCTAGAGAAAGTATTGAATACAAGTGAGCC GAAAGTATGTAACTTGGAACGCAAGCCGGTAAAACATCAATCGTTCAAACGCCAAACCAAAGTGAGATTTTTAGCGGATT CTCAGCAAAATCGAACCGCTTTCGAATTGTTTACGCTTGACCGCGAGGGATTGTTAGCTCGGGTGAGCAGTGTGTTTAAT CAATTGGGTTTAAATTTAATCAATGCGAAAATTACCACGATTGGCGAAAGAGTGGAAGACTTTTTTGTGGTCACGACACA ACAACATCAGGCATTGGACGATAAGGCTCAGAAAGCATTGAAATCGGCATTGTTAGACGAATTGTCGGAGTAG
Upstream 100 bases:
>100_bases ATGCCAAGCGGTCAGAAATTGCAGAAATTTTGCAAATTCTGACCGCTTTTTTATATGATAAAGATGATTGCTTTACAGGA TTTTTAGTTAGGAATAGCAG
Downstream 100 bases:
>100_bases TGTAGAGGGCGTAACGCCCTCTAATTTAAGTATTAAGATTGGGTTTTAAGCAAACCGGACGAACCTTCGGAGTAATCGCG AGGTTGATTACCGTTAGTAT
Product: PII uridylyl-transferase
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 850; Mature: 850
Protein sequence:
>850_residues MNIDVKSQLAEFNTKQCHDFSQEDVFELIYQRSDFYDELLVSLWRQFGFEKRSDMALIAVGGYGRREMFPLSDVDILVLT EQSVDEETAEKLNALFNVLWDCKLQVGASIRTLFESLDIGREEISVATNIYEGRFLTGNKKLWTALVEQIYQADYWPIEA FFQAKIEEKNERYARYHNTSYNLEPDLKHSPGGLRDLHLVSWIFLRHFGTYSFESLLNKGILFAEEFKELNSAQAVLFRM RFALHLQLKRYDNRLRFDRQLQLSELLGYQGEGNQPVEAMMKSYFQATQTISQLSQLLLNSFEQQVLRPQNNLEKQPLDQ HFYLQGSEIYCQDRRCFTHTPASILDLFFYLTQYPDAKASATMLRHLRLSLHKLGQPLSELPEARTRFIRLFEQPNVVKK AIVPMHQLGVLTAYLPQWRHIVGLMQFDLFHIYTVDEHTIRVMLKIESFLDAETTEQHPLCCQYFTACQHKPLLYLAALF HDIAKGRESDHAEVGALDMEQFALQHGFDPMQVTKMVWLVREHLTMSITAQRRDIHDPFVIKAFAEKVENRTALSDLMCL TVADICATNETLWNDWKRSLFAQLFQFTNQQLTKSLDYRKEAETNRQQALELIKFALKPDERTRLQQFWQVCPDSYFLRH KPKQLVWHALAYLKQRIMPLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIVTE LNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQNRTAFELFTLDREGLLARVSSVFN QLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKALKSALLDELSE
Sequences:
>Translated_850_residues MNIDVKSQLAEFNTKQCHDFSQEDVFELIYQRSDFYDELLVSLWRQFGFEKRSDMALIAVGGYGRREMFPLSDVDILVLT EQSVDEETAEKLNALFNVLWDCKLQVGASIRTLFESLDIGREEISVATNIYEGRFLTGNKKLWTALVEQIYQADYWPIEA FFQAKIEEKNERYARYHNTSYNLEPDLKHSPGGLRDLHLVSWIFLRHFGTYSFESLLNKGILFAEEFKELNSAQAVLFRM RFALHLQLKRYDNRLRFDRQLQLSELLGYQGEGNQPVEAMMKSYFQATQTISQLSQLLLNSFEQQVLRPQNNLEKQPLDQ HFYLQGSEIYCQDRRCFTHTPASILDLFFYLTQYPDAKASATMLRHLRLSLHKLGQPLSELPEARTRFIRLFEQPNVVKK AIVPMHQLGVLTAYLPQWRHIVGLMQFDLFHIYTVDEHTIRVMLKIESFLDAETTEQHPLCCQYFTACQHKPLLYLAALF HDIAKGRESDHAEVGALDMEQFALQHGFDPMQVTKMVWLVREHLTMSITAQRRDIHDPFVIKAFAEKVENRTALSDLMCL TVADICATNETLWNDWKRSLFAQLFQFTNQQLTKSLDYRKEAETNRQQALELIKFALKPDERTRLQQFWQVCPDSYFLRH KPKQLVWHALAYLKQRIMPLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIVTE LNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQNRTAFELFTLDREGLLARVSSVFN QLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKALKSALLDELSE >Mature_850_residues MNIDVKSQLAEFNTKQCHDFSQEDVFELIYQRSDFYDELLVSLWRQFGFEKRSDMALIAVGGYGRREMFPLSDVDILVLT EQSVDEETAEKLNALFNVLWDCKLQVGASIRTLFESLDIGREEISVATNIYEGRFLTGNKKLWTALVEQIYQADYWPIEA FFQAKIEEKNERYARYHNTSYNLEPDLKHSPGGLRDLHLVSWIFLRHFGTYSFESLLNKGILFAEEFKELNSAQAVLFRM RFALHLQLKRYDNRLRFDRQLQLSELLGYQGEGNQPVEAMMKSYFQATQTISQLSQLLLNSFEQQVLRPQNNLEKQPLDQ HFYLQGSEIYCQDRRCFTHTPASILDLFFYLTQYPDAKASATMLRHLRLSLHKLGQPLSELPEARTRFIRLFEQPNVVKK AIVPMHQLGVLTAYLPQWRHIVGLMQFDLFHIYTVDEHTIRVMLKIESFLDAETTEQHPLCCQYFTACQHKPLLYLAALF HDIAKGRESDHAEVGALDMEQFALQHGFDPMQVTKMVWLVREHLTMSITAQRRDIHDPFVIKAFAEKVENRTALSDLMCL TVADICATNETLWNDWKRSLFAQLFQFTNQQLTKSLDYRKEAETNRQQALELIKFALKPDERTRLQQFWQVCPDSYFLRH KPKQLVWHALAYLKQRIMPLVLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIVTE LNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQNRTAFELFTLDREGLLARVSSVFN QLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKALKSALLDELSE
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=829, Percent_Identity=46.2002412545235, Blast_Score=767, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR002934 - InterPro: IPR013546 [H]
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 99148; Mature: 99148
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIDVKSQLAEFNTKQCHDFSQEDVFELIYQRSDFYDELLVSLWRQFGFEKRSDMALIAV CCCCHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEE GGYGRREMFPLSDVDILVLTEQSVDEETAEKLNALFNVLWDCKLQVGASIRTLFESLDIG CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC REEISVATNIYEGRFLTGNKKLWTALVEQIYQADYWPIEAFFQAKIEEKNERYARYHNTS HHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC YNLEPDLKHSPGGLRDLHLVSWIFLRHFGTYSFESLLNKGILFAEEFKELNSAQAVLFRM CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RFALHLQLKRYDNRLRFDRQLQLSELLGYQGEGNQPVEAMMKSYFQATQTISQLSQLLLN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SFEQQVLRPQNNLEKQPLDQHFYLQGSEIYCQDRRCFTHTPASILDLFFYLTQYPDAKAS HHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHH ATMLRHLRLSLHKLGQPLSELPEARTRFIRLFEQPNVVKKAIVPMHQLGVLTAYLPQWRH HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHH IVGLMQFDLFHIYTVDEHTIRVMLKIESFLDAETTEQHPLCCQYFTACQHKPLLYLAALF HHHHHHHHHEEEEEECCHHEEHHEEHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH HDIAKGRESDHAEVGALDMEQFALQHGFDPMQVTKMVWLVREHLTMSITAQRRDIHDPFV HHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEHHCCCCCHHH IKAFAEKVENRTALSDLMCLTVADICATNETLWNDWKRSLFAQLFQFTNQQLTKSLDYRK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAETNRQQALELIKFALKPDERTRLQQFWQVCPDSYFLRHKPKQLVWHALAYLKQRIMPL HHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCE VLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIVTE EEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEHHEEEECCCCEEEEHHHEEE LNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQNRTA CCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHEECCCCCCCE FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKAL EEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHH KSALLDELSE HHHHHHHHCC >Mature Secondary Structure MNIDVKSQLAEFNTKQCHDFSQEDVFELIYQRSDFYDELLVSLWRQFGFEKRSDMALIAV CCCCHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEE GGYGRREMFPLSDVDILVLTEQSVDEETAEKLNALFNVLWDCKLQVGASIRTLFESLDIG CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC REEISVATNIYEGRFLTGNKKLWTALVEQIYQADYWPIEAFFQAKIEEKNERYARYHNTS HHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC YNLEPDLKHSPGGLRDLHLVSWIFLRHFGTYSFESLLNKGILFAEEFKELNSAQAVLFRM CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RFALHLQLKRYDNRLRFDRQLQLSELLGYQGEGNQPVEAMMKSYFQATQTISQLSQLLLN HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH SFEQQVLRPQNNLEKQPLDQHFYLQGSEIYCQDRRCFTHTPASILDLFFYLTQYPDAKAS HHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCHHH ATMLRHLRLSLHKLGQPLSELPEARTRFIRLFEQPNVVKKAIVPMHQLGVLTAYLPQWRH HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHH IVGLMQFDLFHIYTVDEHTIRVMLKIESFLDAETTEQHPLCCQYFTACQHKPLLYLAALF HHHHHHHHHEEEEEECCHHEEHHEEHHHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH HDIAKGRESDHAEVGALDMEQFALQHGFDPMQVTKMVWLVREHLTMSITAQRRDIHDPFV HHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEHHCCCCCHHH IKAFAEKVENRTALSDLMCLTVADICATNETLWNDWKRSLFAQLFQFTNQQLTKSLDYRK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAETNRQQALELIKFALKPDERTRLQQFWQVCPDSYFLRHKPKQLVWHALAYLKQRIMPL HHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHCCCE VLVSNEYARGATEIFIYCEDQAQLFLRIAQILSQKKVSIHDAQIITSQNGLVLDSFIVTE EEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEHHEEEECCCCEEEEHHHEEE LNGKPLEEMRCEQIKQSLEKVLNTSEPKVCNLERKPVKHQSFKRQTKVRFLADSQQNRTA CCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHEECCCCCCCE FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKAL EEEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHH KSALLDELSE HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA