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The map label for this gene is 126208072

Identifier: 126208072

GI number: 126208072

Start: 672412

End: 673032

Strand: Reverse

Name: 126208072

Synonym: APL_0590

Alternate gene names: NA

Gene position: 673032-672412 (Counterclockwise)

Preceding gene: 126208074

Following gene: 126208071

Centisome position: 29.59

GC content: 39.61

Gene sequence:

>621_bases
ATGTTAAAACTCGCTAAAAAGGCATTAAATAAGTTTCTACGTAAAACGATTAATCGCCGAAACCGCCAACAATTACAAAA
TCACACGATGTCCGTACTATCGATTAACTGTAACGGCGCATTTATTTTGCACGATTTGAACGAACAATTTCGTTCTCCGT
TTGTGAATTTATATCTCTCTCCGACCGACTTTTTGAAATACTTAAAAAATATGCCGCACTATATGCAGGCTGAACTGACC
TTTATCGCCTCTGAAAAGAACTATCCGGTCGGGAAATTGGATGATCTCACCATTCATTTTATGCACTATAATTCCGAGCA
AGAAGCGGCAAGTAAATGGGCGGAACGTAGCAAACGCATTAATTTGGATAACCTGTTTGTGATGATGACCGATCGTGACG
GCTGTACTTACCAAGATTTGCAAGAATTCGACCGCTTGCCGTTCGCAAATAAAGTGGTCTTTACCCATAAGCCTTATCCG
GAATTAAAATCGGCTTTTTATATCGAAGGATTTGAAAATCAAACGCAAGTCGGCGATTTATTCGAGTTTTCCGGCTGGGA
CGGTAAGAAATATTATGACCAATTGGATTATGTGAATTGGTTTAACGGGAAAGGTTTCTAG

Upstream 100 bases:

>100_bases
TATAAAACATAAGAATTTAATCACGAATAAAATGTCATATTTTCCCGACAGCTAAATTTCTATAAAATATAAAATCTATT
TGCTAACTTGAGAGCCATCT

Downstream 100 bases:

>100_bases
CGTATGTTTAAGGTTTACGGTTTAACGGTAGATGATCAAACACGCTGTCAGCATTATCATTCGGTACTGGATATTATCGC
CATTAAATTCAAATGTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLKLAKKALNKFLRKTINRRNRQQLQNHTMSVLSINCNGAFILHDLNEQFRSPFVNLYLSPTDFLKYLKNMPHYMQAELT
FIASEKNYPVGKLDDLTIHFMHYNSEQEAASKWAERSKRINLDNLFVMMTDRDGCTYQDLQEFDRLPFANKVVFTHKPYP
ELKSAFYIEGFENQTQVGDLFEFSGWDGKKYYDQLDYVNWFNGKGF

Sequences:

>Translated_206_residues
MLKLAKKALNKFLRKTINRRNRQQLQNHTMSVLSINCNGAFILHDLNEQFRSPFVNLYLSPTDFLKYLKNMPHYMQAELT
FIASEKNYPVGKLDDLTIHFMHYNSEQEAASKWAERSKRINLDNLFVMMTDRDGCTYQDLQEFDRLPFANKVVFTHKPYP
ELKSAFYIEGFENQTQVGDLFEFSGWDGKKYYDQLDYVNWFNGKGF
>Mature_206_residues
MLKLAKKALNKFLRKTINRRNRQQLQNHTMSVLSINCNGAFILHDLNEQFRSPFVNLYLSPTDFLKYLKNMPHYMQAELT
FIASEKNYPVGKLDDLTIHFMHYNSEQEAASKWAERSKRINLDNLFVMMTDRDGCTYQDLQEFDRLPFANKVVFTHKPYP
ELKSAFYIEGFENQTQVGDLFEFSGWDGKKYYDQLDYVNWFNGKGF

Specific function: Unknown

COG id: COG3955

COG function: function code M; Exopolysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015037 [H]

Pfam domain/function: PF08942 DUF1919 [H]

EC number: NA

Molecular weight: Translated: 24431; Mature: 24431

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLAKKALNKFLRKTINRRNRQQLQNHTMSVLSINCNGAFILHDLNEQFRSPFVNLYLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEECHHHHHCCCEEEEEEC
PTDFLKYLKNMPHYMQAELTFIASEKNYPVGKLDDLTIHFMHYNSEQEAASKWAERSKRI
HHHHHHHHHCCCHHHHEEEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCC
NLDNLFVMMTDRDGCTYQDLQEFDRLPFANKVVFTHKPYPELKSAFYIEGFENQTQVGDL
CCCEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHEEEEECCCCCCCCCCH
FEFSGWDGKKYYDQLDYVNWFNGKGF
HEECCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLKLAKKALNKFLRKTINRRNRQQLQNHTMSVLSINCNGAFILHDLNEQFRSPFVNLYLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEEEECHHHHHCCCEEEEEEC
PTDFLKYLKNMPHYMQAELTFIASEKNYPVGKLDDLTIHFMHYNSEQEAASKWAERSKRI
HHHHHHHHHCCCHHHHEEEEEEECCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHCCC
NLDNLFVMMTDRDGCTYQDLQEFDRLPFANKVVFTHKPYPELKSAFYIEGFENQTQVGDL
CCCEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCCHHHHHEEEEECCCCCCCCCCH
FEFSGWDGKKYYDQLDYVNWFNGKGF
HEECCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]