Click here to switch to the map view.

The map label for this gene is tadC

Identifier: 126208032

GI number: 126208032

Start: 619871

End: 620716

Strand: Reverse

Name: tadC

Synonym: APL_0550

Alternate gene names: NA

Gene position: 620716-619871 (Counterclockwise)

Preceding gene: 126208033

Following gene: 126208031

Centisome position: 27.29

GC content: 36.29

Gene sequence:

>846_bases
ATGAATCTTATTCTATTCTTCCTTGGCATTATCGTATTCGGTATTTTCGTCTTAACGATGGCTTTCTCCCATAAAAAGAA
AATAGACAAAAATAAAGAGATTCTTGAAGGAATTCGCCCTAAAGACAATGTAGAGGATAACAGTCAAAAAGGGAAAACCA
AGCAGCAAATTGAGCTGGAATTACTACTGGTAAATAAAAATCCATTACTTAAATTCCTTGGCTTAGTTGATAAAAATATC
AAAGTAAAACTATTGGTTATCGCTCTACTTACGTTGATTAACTATATCGTAAGCGATGATCAGACTACATTTTTATTAGG
CTGTGCGGTTGTTGTGGTCTTAGCGATTATGTTTCCGAGTATTACCATCGGTGTAATCTTAAAAAGCAAAATCAAACGCA
TTATGAACGACATTCCCGGATTTATTGATCTTGTCGCCGTCAATGTTCAAACCGGTATCAGTATCGAAGCCGCCTTTAAA
CAGGTCGCGATTGATTTTGAACATTTAAATGCGGACTTAACTTACGTCATTTTGCGTATTATTCGTAAGGCGGAACTTAC
CAGCTTAAGTACCGCATTACAGGATATGGCGATTTCATTACCTACTAAAGAAATAAGAATGTTCTGTACGGTAATGCAAC
AAAGCCTAAATTTCGGTTCTTCGCTTTATGAACATTTAACGCAACTATCCGCCGATATTCGTGAAATGCAGTTACTTGTA
ATGGAAGAAAAACTTGGAACGCTCTCCGCCAAAATGAGTATTCCGCTTATTCTTTTCATTATGTTTCCCATTATCATTTT
AATTGTCGCACCTGGTGCAATGAGGGTTTTACCAAATGTCTTCTAA

Upstream 100 bases:

>100_bases
TCGTCAATGATCCCGCCGGTCGTATCATTCTCTACTATGTGGTAGGCAGTGAATTGCTCGGTATGTTTATTATTTGGTGG
TTAATGAGGAAATCGACTTA

Downstream 100 bases:

>100_bases
ATTACTTAAAACAATTTTCGTATCTACCGTATTACTGTCTTTATCCGCTTGTTCTAACTTGACGGCAAATCTCTCACCCG
CCCAAAAGGCCGAACAAGAA

Product: tight adherence protein C

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Tight Adherence Protein C; TadC Protein; Bacterial Type II Secretion System Protein; Type II Secretion System Protein; Bacterial Type II Secretion System Protein F; Tight Adherance Operon Protein C; Tight Adherance Operon Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNLILFFLGIIVFGIFVLTMAFSHKKKIDKNKEILEGIRPKDNVEDNSQKGKTKQQIELELLLVNKNPLLKFLGLVDKNI
KVKLLVIALLTLINYIVSDDQTTFLLGCAVVVVLAIMFPSITIGVILKSKIKRIMNDIPGFIDLVAVNVQTGISIEAAFK
QVAIDFEHLNADLTYVILRIIRKAELTSLSTALQDMAISLPTKEIRMFCTVMQQSLNFGSSLYEHLTQLSADIREMQLLV
MEEKLGTLSAKMSIPLILFIMFPIIILIVAPGAMRVLPNVF

Sequences:

>Translated_281_residues
MNLILFFLGIIVFGIFVLTMAFSHKKKIDKNKEILEGIRPKDNVEDNSQKGKTKQQIELELLLVNKNPLLKFLGLVDKNI
KVKLLVIALLTLINYIVSDDQTTFLLGCAVVVVLAIMFPSITIGVILKSKIKRIMNDIPGFIDLVAVNVQTGISIEAAFK
QVAIDFEHLNADLTYVILRIIRKAELTSLSTALQDMAISLPTKEIRMFCTVMQQSLNFGSSLYEHLTQLSADIREMQLLV
MEEKLGTLSAKMSIPLILFIMFPIIILIVAPGAMRVLPNVF
>Mature_281_residues
MNLILFFLGIIVFGIFVLTMAFSHKKKIDKNKEILEGIRPKDNVEDNSQKGKTKQQIELELLLVNKNPLLKFLGLVDKNI
KVKLLVIALLTLINYIVSDDQTTFLLGCAVVVVLAIMFPSITIGVILKSKIKRIMNDIPGFIDLVAVNVQTGISIEAAFK
QVAIDFEHLNADLTYVILRIIRKAELTSLSTALQDMAISLPTKEIRMFCTVMQQSLNFGSSLYEHLTQLSADIREMQLLV
MEEKLGTLSAKMSIPLILFIMFPIIILIVAPGAMRVLPNVF

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31445; Mature: 31445

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLILFFLGIIVFGIFVLTMAFSHKKKIDKNKEILEGIRPKDNVEDNSQKGKTKQQIELE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCHHHEEEE
LLLVNKNPLLKFLGLVDKNIKVKLLVIALLTLINYIVSDDQTTFLLGCAVVVVLAIMFPS
EEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ITIGVILKSKIKRIMNDIPGFIDLVAVNVQTGISIEAAFKQVAIDFEHLNADLTYVILRI
HHHHHHHHHHHHHHHHHCCCHHHHHEEHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
IRKAELTSLSTALQDMAISLPTKEIRMFCTVMQQSLNFGSSLYEHLTQLSADIREMQLLV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
MEEKLGTLSAKMSIPLILFIMFPIIILIVAPGAMRVLPNVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure
MNLILFFLGIIVFGIFVLTMAFSHKKKIDKNKEILEGIRPKDNVEDNSQKGKTKQQIELE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCHHHEEEE
LLLVNKNPLLKFLGLVDKNIKVKLLVIALLTLINYIVSDDQTTFLLGCAVVVVLAIMFPS
EEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ITIGVILKSKIKRIMNDIPGFIDLVAVNVQTGISIEAAFKQVAIDFEHLNADLTYVILRI
HHHHHHHHHHHHHHHHHCCCHHHHHEEHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH
IRKAELTSLSTALQDMAISLPTKEIRMFCTVMQQSLNFGSSLYEHLTQLSADIREMQLLV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
MEEKLGTLSAKMSIPLILFIMFPIIILIVAPGAMRVLPNVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA