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The map label for this gene is tadD

Identifier: 126208031

GI number: 126208031

Start: 619129

End: 619881

Strand: Reverse

Name: tadD

Synonym: APL_0549

Alternate gene names: NA

Gene position: 619881-619129 (Counterclockwise)

Preceding gene: 126208032

Following gene: 126208030

Centisome position: 27.25

GC content: 36.52

Gene sequence:

>753_bases
ATGTCTTCTAAATTACTTAAAACAATTTTCGTATCTACCGTATTACTGTCTTTATCCGCTTGTTCTAACTTGACGGCAAA
TCTCTCACCCGCCCAAAAGGCCGAACAAGAAAAACTGTATGAAGATACCAAAAATTATAGCGCTCTGATTTCTTTATATC
GTAACCAACTTAAATTGAATCAAGATCCTCTTGTTCAATATAAATTAGCTAAAAGCTACTACTTATCCGGCGATAGTAAA
TCTTCCTTACTTTATTTAGAACCGCTTCGCTTTAAACAATTGCCTTTTAACGAAGATATCGAATTATTGTATATCCGTAA
TCAAATTCAAGCCGGGGCATATAACGAAGCATACTTAGCGGCAACGGATCTCATCTTCCAATCGCCGAGAAGCAGCGAAG
CCTATAACTTACGGGCTATCAGTTTAGCGCAACTAGGTAAATTGGCGGCGGCTGAAAAGGATCTGAATAAATCTCGCGAA
TTATTTATTCATGACACTATTGCCATCAATAATTTGGCTATGTTGAGCATTTTAAATAACGACTATCGTAATGCGGCAAA
TTTGCTATTACCGCAATATTTAAACGGTTCGAAAGATTCTCGTTTAATTCACAACTTGGTTTTTGCTTTAGTTAAAGCCG
GTGATACGGAATATGCTTTAGATATTATTCGTAAAGAGCATCTTAATTCTTCTCCGGAAGACTTAGTTAATGCGCTACAA
AAAACAGAGAAATCACCTAAAGTGGGACGTTAA

Upstream 100 bases:

>100_bases
GGAACGCTCTCCGCCAAAATGAGTATTCCGCTTATTCTTTTCATTATGTTTCCCATTATCATTTTAATTGTCGCACCTGG
TGCAATGAGGGTTTTACCAA

Downstream 100 bases:

>100_bases
TTATGAAAAAAACGCTTTACCGTTTTATTAATAATGTAAAAGGCGTTGCAACTATTGAGTTCAGTCTAACGATTGGACTC
TTTATTCTCGTGCTTTTTAT

Product: tight adherence protein D

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Secretion System Protein; Tight Adherance Operon Protein D; NrfG Protein; Tight Adherance Operon Protein

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSSKLLKTIFVSTVLLSLSACSNLTANLSPAQKAEQEKLYEDTKNYSALISLYRNQLKLNQDPLVQYKLAKSYYLSGDSK
SSLLYLEPLRFKQLPFNEDIELLYIRNQIQAGAYNEAYLAATDLIFQSPRSSEAYNLRAISLAQLGKLAAAEKDLNKSRE
LFIHDTIAINNLAMLSILNNDYRNAANLLLPQYLNGSKDSRLIHNLVFALVKAGDTEYALDIIRKEHLNSSPEDLVNALQ
KTEKSPKVGR

Sequences:

>Translated_250_residues
MSSKLLKTIFVSTVLLSLSACSNLTANLSPAQKAEQEKLYEDTKNYSALISLYRNQLKLNQDPLVQYKLAKSYYLSGDSK
SSLLYLEPLRFKQLPFNEDIELLYIRNQIQAGAYNEAYLAATDLIFQSPRSSEAYNLRAISLAQLGKLAAAEKDLNKSRE
LFIHDTIAINNLAMLSILNNDYRNAANLLLPQYLNGSKDSRLIHNLVFALVKAGDTEYALDIIRKEHLNSSPEDLVNALQ
KTEKSPKVGR
>Mature_249_residues
SSKLLKTIFVSTVLLSLSACSNLTANLSPAQKAEQEKLYEDTKNYSALISLYRNQLKLNQDPLVQYKLAKSYYLSGDSKS
SLLYLEPLRFKQLPFNEDIELLYIRNQIQAGAYNEAYLAATDLIFQSPRSSEAYNLRAISLAQLGKLAAAEKDLNKSREL
FIHDTIAINNLAMLSILNNDYRNAANLLLPQYLNGSKDSRLIHNLVFALVKAGDTEYALDIIRKEHLNSSPEDLVNALQK
TEKSPKVGR

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28107; Mature: 27976

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKLLKTIFVSTVLLSLSACSNLTANLSPAQKAEQEKLYEDTKNYSALISLYRNQLKLN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QDPLVQYKLAKSYYLSGDSKSSLLYLEPLRFKQLPFNEDIELLYIRNQIQAGAYNEAYLA
CCCCHHHHHHHHHEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEECHHCCCCCCCHHHH
ATDLIFQSPRSSEAYNLRAISLAQLGKLAAAEKDLNKSRELFIHDTIAINNLAMLSILNN
HHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEHEEHHHHHHHHHHHC
DYRNAANLLLPQYLNGSKDSRLIHNLVFALVKAGDTEYALDIIRKEHLNSSPEDLVNALQ
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH
KTEKSPKVGR
HHCCCCCCCC
>Mature Secondary Structure 
SSKLLKTIFVSTVLLSLSACSNLTANLSPAQKAEQEKLYEDTKNYSALISLYRNQLKLN
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QDPLVQYKLAKSYYLSGDSKSSLLYLEPLRFKQLPFNEDIELLYIRNQIQAGAYNEAYLA
CCCCHHHHHHHHHEECCCCCCCEEEECCCCCCCCCCCCCCEEEEEECHHCCCCCCCHHHH
ATDLIFQSPRSSEAYNLRAISLAQLGKLAAAEKDLNKSRELFIHDTIAINNLAMLSILNN
HHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEHEEHHHHHHHHHHHC
DYRNAANLLLPQYLNGSKDSRLIHNLVFALVKAGDTEYALDIIRKEHLNSSPEDLVNALQ
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHH
KTEKSPKVGR
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA