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The map label for this gene is tadF

Identifier: 126208029

GI number: 126208029

Start: 618073

End: 618669

Strand: Reverse

Name: tadF

Synonym: APL_0547

Alternate gene names: NA

Gene position: 618669-618073 (Counterclockwise)

Preceding gene: 126208030

Following gene: 126208028

Centisome position: 27.2

GC content: 37.52

Gene sequence:

>597_bases
ATGAAAAAGATAAAGCAACTTCTAAATAATAATCAAGGGTCGGTAACCGTAGAATTTATATTTATTTTCTTCCTGTTTTC
CGTATTACTTATTTTCTTAGTGGACGTTGCGATTCTGCAATCAACCACGGGTAAATTACAACGTACTTCTTATTCACTTT
TAAATGTCGTTAAAGAACGTAATATTTCGGACGGCGGTAAAGAAGAAGTCACTGAAGCTGATGTTAAAAAGTTAAAACAA
CTTGCGGTTAAGTTAATGGGCGAAACCGATGATAAGCTGATTGATGTTACTGTTACTTATTATGGTTCTGAACCGATTAA
ACCTCAAGATCCTAAAAGTAGTAGCGCTACTCGCCCGGAAAAGAAATTGAAATCCTCAACATTCTCAACAGGCAATCAAT
GTAAAGCGGCTTATAGTACGAATATTACCGATGCGGCACCGCTTACCGAAAACTTTAAAGGCTCAAACCGTTATGCGGCA
ATCTATTACGTAACGGTATGTCGCAAAATGACTAACTTATTTAAAGGACTTACATTAGCGAAACAAGACTATGAATCCGA
CCGATTACGTGCATCAGCTTTAGGCGTCGGTCGTTAA

Upstream 100 bases:

>100_bases
CAATACTCATTTCAGTATAGATACACGCCGTTATTCTTCTGGGTTCCTAAAGGCGCAGTTGAACCTCTATTTAACCGTAA
TATCGTGGTACTTCAAGAAT

Downstream 100 bases:

>100_bases
TAAATTAATAAGGATGGATTCTTATGAAAATAACCTCATTATCCCAAGCCAGACGTTTTATTCAGGATGAATCTGGCGTA
TATACCGTTATGGGCGGATT

Product: tight adherence protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKKIKQLLNNNQGSVTVEFIFIFFLFSVLLIFLVDVAILQSTTGKLQRTSYSLLNVVKERNISDGGKEEVTEADVKKLKQ
LAVKLMGETDDKLIDVTVTYYGSEPIKPQDPKSSSATRPEKKLKSSTFSTGNQCKAAYSTNITDAAPLTENFKGSNRYAA
IYYVTVCRKMTNLFKGLTLAKQDYESDRLRASALGVGR

Sequences:

>Translated_198_residues
MKKIKQLLNNNQGSVTVEFIFIFFLFSVLLIFLVDVAILQSTTGKLQRTSYSLLNVVKERNISDGGKEEVTEADVKKLKQ
LAVKLMGETDDKLIDVTVTYYGSEPIKPQDPKSSSATRPEKKLKSSTFSTGNQCKAAYSTNITDAAPLTENFKGSNRYAA
IYYVTVCRKMTNLFKGLTLAKQDYESDRLRASALGVGR
>Mature_198_residues
MKKIKQLLNNNQGSVTVEFIFIFFLFSVLLIFLVDVAILQSTTGKLQRTSYSLLNVVKERNISDGGKEEVTEADVKKLKQ
LAVKLMGETDDKLIDVTVTYYGSEPIKPQDPKSSSATRPEKKLKSSTFSTGNQCKAAYSTNITDAAPLTENFKGSNRYAA
IYYVTVCRKMTNLFKGLTLAKQDYESDRLRASALGVGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22029; Mature: 22029

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIKQLLNNNQGSVTVEFIFIFFLFSVLLIFLVDVAILQSTTGKLQRTSYSLLNVVKER
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
NISDGGKEEVTEADVKKLKQLAVKLMGETDDKLIDVTVTYYGSEPIKPQDPKSSSATRPE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHH
KKLKSSTFSTGNQCKAAYSTNITDAAPLTENFKGSNRYAAIYYVTVCRKMTNLFKGLTLA
HHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
KQDYESDRLRASALGVGR
HHCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKIKQLLNNNQGSVTVEFIFIFFLFSVLLIFLVDVAILQSTTGKLQRTSYSLLNVVKER
CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
NISDGGKEEVTEADVKKLKQLAVKLMGETDDKLIDVTVTYYGSEPIKPQDPKSSSATRPE
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHH
KKLKSSTFSTGNQCKAAYSTNITDAAPLTENFKGSNRYAAIYYVTVCRKMTNLFKGLTLA
HHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
KQDYESDRLRASALGVGR
HHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA