| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126208005
Identifier: 126208005
GI number: 126208005
Start: 590784
End: 591521
Strand: Direct
Name: 126208005
Synonym: APL_0521
Alternate gene names: NA
Gene position: 590784-591521 (Clockwise)
Preceding gene: 126208004
Following gene: 126208006
Centisome position: 25.97
GC content: 44.58
Gene sequence:
>738_bases ATGCCAAAAGCATTACCTTCTAAAATGGCCCAAGAGTTGCCAAAACTTGAACAAGGTGCATTGATTGAGCTTTGGGAAAT TGATCTCCGCCATATCCCAAATAGTAACGGCAGCGATACTACTGGGGAGCTGTATCGTTTTCACAATGGGATGAGCCAAG GACGAACAAATATTTGGTGGCAAGGTCATGAATACCAAGCCTATCCAATTAAGGCTGACGGATTCGAAATCAGCGGACAA GGTCCAAGCTCACGCCCTACGCTTACAGTTTCCAACCTGTACGGCATTATTACAGGGATTGCCGCTAATTTCGGGCAAGG TGTGGGCGGTAAAGTTACCCGCCGCTTGGTTTATGCTCAATTTCTTGACCCTCGCAATTTCACGGGCGGCAAAAATAGTA AAGCTGATCCGACACAAGAAGCGGTGAGTTACTTTATCATTGAACAACTGAAAAGCCTTGATGATGAACAAGCTACTTTT GAACTTGCTTCGCCGGCAGAAACGGATAATGCCAAGATTCCGTTATTGATGATTACCTCTGATGTCTGCATTTGGCAATA CCGTTCCGCACAATGTGGCTACACAGGTGGACCTGTGGCGGATGAATTTGACAAACCAACGACAGATCGTAAAAAAGACA AATGTTCGCATTGTATTAGAGGTTGTAAGTTACGGTTTGGTGAAAATGCAGTGTTGTCCTTTGGCGGTTTTCCTAGCACA ACACAATATGGAAATTAA
Upstream 100 bases:
>100_bases ATCCGACCGCTTGTAGCCTTGAGTTACAAGCGGCGTTAGTGCTACAAACAATTCGCCCTGACGATCAATATCGTTGGGGC TTTTTTATAGGAGAAATTTA
Downstream 100 bases:
>100_bases AATGAAAATTGATGACCGATTACGAAAAGAAATTCTAGCGCACGCTAGTGAATGTAAGCCGCACGAATGTTGCGGCTTTG TTGTTTCTAGCCATATTGAC
Product: phage-related minor tail protein L
Products: NA
Alternate protein names: Minor Tail Protein L; Minor Tail Protein; Phage Protein; Phage Minor Tail Protein; Phage-Related Minor Tail Protein L; Phage Tail Protein; Gifsy-2 Prophage Minor Tail Protein; Phage Tail Component L-Like Protein; Minor Tail Fiber Protein L; Phage-Like Protein; Bacteriophage Tail Protein; Prophage LambdaSo Minor Tail Protein L; Gifsy-1 Prophage VmtL; Phage-Related Protein; Gp65 Phage Protein
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MPKALPSKMAQELPKLEQGALIELWEIDLRHIPNSNGSDTTGELYRFHNGMSQGRTNIWWQGHEYQAYPIKADGFEISGQ GPSSRPTLTVSNLYGIITGIAANFGQGVGGKVTRRLVYAQFLDPRNFTGGKNSKADPTQEAVSYFIIEQLKSLDDEQATF ELASPAETDNAKIPLLMITSDVCIWQYRSAQCGYTGGPVADEFDKPTTDRKKDKCSHCIRGCKLRFGENAVLSFGGFPST TQYGN
Sequences:
>Translated_245_residues MPKALPSKMAQELPKLEQGALIELWEIDLRHIPNSNGSDTTGELYRFHNGMSQGRTNIWWQGHEYQAYPIKADGFEISGQ GPSSRPTLTVSNLYGIITGIAANFGQGVGGKVTRRLVYAQFLDPRNFTGGKNSKADPTQEAVSYFIIEQLKSLDDEQATF ELASPAETDNAKIPLLMITSDVCIWQYRSAQCGYTGGPVADEFDKPTTDRKKDKCSHCIRGCKLRFGENAVLSFGGFPST TQYGN >Mature_244_residues PKALPSKMAQELPKLEQGALIELWEIDLRHIPNSNGSDTTGELYRFHNGMSQGRTNIWWQGHEYQAYPIKADGFEISGQG PSSRPTLTVSNLYGIITGIAANFGQGVGGKVTRRLVYAQFLDPRNFTGGKNSKADPTQEAVSYFIIEQLKSLDDEQATFE LASPAETDNAKIPLLMITSDVCIWQYRSAQCGYTGGPVADEFDKPTTDRKKDKCSHCIRGCKLRFGENAVLSFGGFPSTT QYGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27026; Mature: 26894
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKALPSKMAQELPKLEQGALIELWEIDLRHIPNSNGSDTTGELYRFHNGMSQGRTNIWW CCCCCHHHHHHHCCCCCCCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHCCHHCCCCCEEE QGHEYQAYPIKADGFEISGQGPSSRPTLTVSNLYGIITGIAANFGQGVGGKVTRRLVYAQ ECCCEEEEEECCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FLDPRNFTGGKNSKADPTQEAVSYFIIEQLKSLDDEQATFELASPAETDNAKIPLLMITS HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCEEEEEEEEC DVCIWQYRSAQCGYTGGPVADEFDKPTTDRKKDKCSHCIRGCKLRFGENAVLSFGGFPST CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCEEEEECCCCCC TQYGN CCCCC >Mature Secondary Structure PKALPSKMAQELPKLEQGALIELWEIDLRHIPNSNGSDTTGELYRFHNGMSQGRTNIWW CCCCHHHHHHHCCCCCCCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHCCHHCCCCCEEE QGHEYQAYPIKADGFEISGQGPSSRPTLTVSNLYGIITGIAANFGQGVGGKVTRRLVYAQ ECCCEEEEEECCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FLDPRNFTGGKNSKADPTQEAVSYFIIEQLKSLDDEQATFELASPAETDNAKIPLLMITS HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCCCCCCCEEEEEEEEC DVCIWQYRSAQCGYTGGPVADEFDKPTTDRKKDKCSHCIRGCKLRFGENAVLSFGGFPST CEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCEEEEECCCCCC TQYGN CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA