| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is 126208003
Identifier: 126208003
GI number: 126208003
Start: 588612
End: 588947
Strand: Direct
Name: 126208003
Synonym: APL_0519
Alternate gene names: NA
Gene position: 588612-588947 (Clockwise)
Preceding gene: 126208002
Following gene: 126208004
Centisome position: 25.88
GC content: 42.26
Gene sequence:
>336_bases ATGGCATTAAAAACGCTGTCGTGGTGTCCGCAACCTGGTTATACCGTGGAAGAAGAGCCACGACGAAAAGTGCTGAATTA TGGCAACGGCTATCAGCAACGCATAGAGGACGGAATTAATACGTTATTGCGTAAGTATTCCGTTACCTACAAAATAAAAA ACAAAGAATCGGTACAATTCCGCGGCTTTATGAAAGAGCACGGCGGAGTTCGTGCCTTTTATTTTAAGGACGTGGCATTA GGTGGCGAATTGGTAAAAGTTGTATGTACTAAGTTTCCACGCCAAGCCGGTAAAAAGCATACGATTTTTACTTGTGAATT TGAAGAGGTAATCTAG
Upstream 100 bases:
>100_bases TGAAATTACCGCTTGTATCTCTTTCATTGTTTTAATTTGGCAATTTGCCAATATTCTAAATGCGATCAAATCCCTAATGA ATAAATAATAGGTGGTCAAT
Downstream 100 bases:
>100_bases CTTTAAAAATTGTAGAAAAAGTTTTCTCAAGTGCGTAGAATACAATAGTTCACATCAATATAAAAAAGGATTATTAGGTG AAAAAATTTGCATTATTAAT
Product: phage minor tail protein
Products: NA
Alternate protein names: Minor Tail Protein; Minor Tail Protein M; Gifsy-1 Prophage VmtM; Gifsy-2 Prophage Minor Tail Protein; Bacteriophage Tail Protein
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MALKTLSWCPQPGYTVEEEPRRKVLNYGNGYQQRIEDGINTLLRKYSVTYKIKNKESVQFRGFMKEHGGVRAFYFKDVAL GGELVKVVCTKFPRQAGKKHTIFTCEFEEVI
Sequences:
>Translated_111_residues MALKTLSWCPQPGYTVEEEPRRKVLNYGNGYQQRIEDGINTLLRKYSVTYKIKNKESVQFRGFMKEHGGVRAFYFKDVAL GGELVKVVCTKFPRQAGKKHTIFTCEFEEVI >Mature_110_residues ALKTLSWCPQPGYTVEEEPRRKVLNYGNGYQQRIEDGINTLLRKYSVTYKIKNKESVQFRGFMKEHGGVRAFYFKDVALG GELVKVVCTKFPRQAGKKHTIFTCEFEEVI
Specific function: Unknown
COG id: COG4718
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12871; Mature: 12740
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKTLSWCPQPGYTVEEEPRRKVLNYGNGYQQRIEDGINTLLRKYSVTYKIKNKESVQF CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHH RGFMKEHGGVRAFYFKDVALGGELVKVVCTKFPRQAGKKHTIFTCEFEEVI HHHHHHCCCEEEEEEECHHCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHCC >Mature Secondary Structure ALKTLSWCPQPGYTVEEEPRRKVLNYGNGYQQRIEDGINTLLRKYSVTYKIKNKESVQF CCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCHH RGFMKEHGGVRAFYFKDVALGGELVKVVCTKFPRQAGKKHTIFTCEFEEVI HHHHHHCCCEEEEEEECHHCCHHHHHHHHHHHHHHCCCCCEEEEEEHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA