| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126207910
Identifier: 126207910
GI number: 126207910
Start: 483270
End: 483728
Strand: Reverse
Name: 126207910
Synonym: APL_0426
Alternate gene names: NA
Gene position: 483728-483270 (Counterclockwise)
Preceding gene: 126207911
Following gene: 126207905
Centisome position: 21.27
GC content: 35.51
Gene sequence:
>459_bases ATGATGAGAAAAATTCTATTTACATTAGTTTGTGCAACATTAGCTCATACCGGTTTTGCAAATTCTGCGGAAAATTCGAC CGCTTATACGGAGCAAGTTAAATATAAAATATCCGAAACGGATATAAAAATACTTATACGTCAGCTGAATAATATCGAAC AATGTATATTTCCGGATCTTGCTAAGCCCGACTATCAAAAGATCTATGATAATTGGTCGGTTGCCGAAAATATGACGATG TTCTATTTTCAGCAAAATCTCTTAACAGAGCTGATCGGCGAACAAAATGCGCAATTTATTGAAAAAGATAAACTCTCACG CCAATATTTTGAACAAATGCACGAGAAATACAACCACCAAAAAGCCAGTGTAGATAAATCCCGCTGTGAAGATTTCAAAC CGATATATGCGCAAATCAAACAGCGAATTGAATACTCTATACCGCAGGTGTATAAGTAA
Upstream 100 bases:
>100_bases TATAACAATTTTATATAATATAAACCCTCTTCGGAGGGTTTCTTTTTGCGCAAAATAAAAAGTTTATGCTATGCTGTGAC AAACAGATATAGGAATAAAT
Downstream 100 bases:
>100_bases GATAAAAATATCATACAGAAAAGCCCTTGAATCCTCGCGGACTCAAGGGCTTGTTTTTATGCTTGAATTTAGTTTTCGTT ATGAATTTCTAAATTGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MMRKILFTLVCATLAHTGFANSAENSTAYTEQVKYKISETDIKILIRQLNNIEQCIFPDLAKPDYQKIYDNWSVAENMTM FYFQQNLLTELIGEQNAQFIEKDKLSRQYFEQMHEKYNHQKASVDKSRCEDFKPIYAQIKQRIEYSIPQVYK
Sequences:
>Translated_152_residues MMRKILFTLVCATLAHTGFANSAENSTAYTEQVKYKISETDIKILIRQLNNIEQCIFPDLAKPDYQKIYDNWSVAENMTM FYFQQNLLTELIGEQNAQFIEKDKLSRQYFEQMHEKYNHQKASVDKSRCEDFKPIYAQIKQRIEYSIPQVYK >Mature_152_residues MMRKILFTLVCATLAHTGFANSAENSTAYTEQVKYKISETDIKILIRQLNNIEQCIFPDLAKPDYQKIYDNWSVAENMTM FYFQQNLLTELIGEQNAQFIEKDKLSRQYFEQMHEKYNHQKASVDKSRCEDFKPIYAQIKQRIEYSIPQVYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18072; Mature: 18072
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRKILFTLVCATLAHTGFANSAENSTAYTEQVKYKISETDIKILIRQLNNIEQCIFPDL CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AKPDYQKIYDNWSVAENMTMFYFQQNLLTELIGEQNAQFIEKDKLSRQYFEQMHEKYNHQ CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH KASVDKSRCEDFKPIYAQIKQRIEYSIPQVYK HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMRKILFTLVCATLAHTGFANSAENSTAYTEQVKYKISETDIKILIRQLNNIEQCIFPDL CHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AKPDYQKIYDNWSVAENMTMFYFQQNLLTELIGEQNAQFIEKDKLSRQYFEQMHEKYNHQ CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH KASVDKSRCEDFKPIYAQIKQRIEYSIPQVYK HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA