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The map label for this gene is pbpG [H]

Identifier: 126207904

GI number: 126207904

Start: 476952

End: 477731

Strand: Reverse

Name: pbpG [H]

Synonym: APL_0420

Alternate gene names: 126207904

Gene position: 477731-476952 (Counterclockwise)

Preceding gene: 126207905

Following gene: 126207902

Centisome position: 21.0

GC content: 40.64

Gene sequence:

>780_bases
ATGCTAAAAAAATTCCTCTCCCTTTTATTGCTTTCCCCAAGTTTAGCGATAGCACAATCTTACGTCGTGTATGATTTTAC
CCATGATAGAATTTTGGAAAGCCGTGCCGCAAATAATGTACAACCTATAGCTTCCGTTACTAAATTGATGACGGCGAATA
TTTTCTTAGAAAATAATAAAAACAAAAATTGCAGTGCCTCTATTTCCGATCAAGATTTTGATCATATTAAAGGAACCGGT
ACAAAGTTACCGAAACATACGCCGATTGCTTGTGACGAATTGTTAAAAGCGATGCTAGTCCATTCGGATAATTATGCCGC
CCATGCGCTTTCTCGTTCCGCCGGTATGAGCCGTGCGCAATTTATCCAAAAGATGAACCAAAAAGCACAGCAACTAGGTA
TGCGTTCGACACGTTTTAGTGACAGTTCCGGTTTATCCAGTGCGAATATTTCCAGTGCGCTGGATTTGGTCAAACTGGCA
AAATATTCGCTTAACAATGCCAAAATTCAAGAACTTTCCAATACGAAAGCGGCTTACGTACGAGTAGGCAAACGTAACGT
TTTTATGCAAAACACCAGTGCTTTAGTACGTGAAGAACTGTTCGATGCGGCGATTAATAAAACCGGTTATATTCGTGAGT
CCGGCTATAACTTAGTGTTTGTCAATAAACATCAATGCAATCATGCGACCATCGGTGTCATCAGCTTGAATAATCGCAGC
TCTGCTACCCGTTCAACCTTACCAAAAACAAATTGGAACAGTACGGTTGCGTTTCCTTAG

Upstream 100 bases:

>100_bases
ACATTTGGCATTCATAAGAATTGTTTAATAAATAGCTAGAAAGTCAAAAGCCTGTTAAAATGGCAAGTCTTTTTTTAATT
GAAGTGAACTTAATAACAAT

Downstream 100 bases:

>100_bases
CTAAGGAAGATTTCAATTATCACGAAGAAGAAGATATTTAAGAAAAAGACCGCTTGTGCATGATCAGCATTACAAGCGGT
CTTTTTTTGGCAATTTTTTG

Product: penicillin-binding protein 7 precursor

Products: NA

Alternate protein names: DD-endopeptidase; Penicillin-binding protein 7 homolog; PBP-7 [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MLKKFLSLLLLSPSLAIAQSYVVYDFTHDRILESRAANNVQPIASVTKLMTANIFLENNKNKNCSASISDQDFDHIKGTG
TKLPKHTPIACDELLKAMLVHSDNYAAHALSRSAGMSRAQFIQKMNQKAQQLGMRSTRFSDSSGLSSANISSALDLVKLA
KYSLNNAKIQELSNTKAAYVRVGKRNVFMQNTSALVREELFDAAINKTGYIRESGYNLVFVNKHQCNHATIGVISLNNRS
SATRSTLPKTNWNSTVAFP

Sequences:

>Translated_259_residues
MLKKFLSLLLLSPSLAIAQSYVVYDFTHDRILESRAANNVQPIASVTKLMTANIFLENNKNKNCSASISDQDFDHIKGTG
TKLPKHTPIACDELLKAMLVHSDNYAAHALSRSAGMSRAQFIQKMNQKAQQLGMRSTRFSDSSGLSSANISSALDLVKLA
KYSLNNAKIQELSNTKAAYVRVGKRNVFMQNTSALVREELFDAAINKTGYIRESGYNLVFVNKHQCNHATIGVISLNNRS
SATRSTLPKTNWNSTVAFP
>Mature_259_residues
MLKKFLSLLLLSPSLAIAQSYVVYDFTHDRILESRAANNVQPIASVTKLMTANIFLENNKNKNCSASISDQDFDHIKGTG
TKLPKHTPIACDELLKAMLVHSDNYAAHALSRSAGMSRAQFIQKMNQKAQQLGMRSTRFSDSSGLSSANISSALDLVKLA
KYSLNNAKIQELSNTKAAYVRVGKRNVFMQNTSALVREELFDAAINKTGYIRESGYNLVFVNKHQCNHATIGVISLNNRS
SATRSTLPKTNWNSTVAFP

Specific function: Cell wall formation. May play a specialized role in remodeling the cell wall. Specifically hydrolyze the DD- diaminopimelate-alanine bonds in high-molecular-mass murein sacculi [H]

COG id: COG1686

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S11 family [H]

Homologues:

Organism=Escherichia coli, GI87082054, Length=210, Percent_Identity=30.4761904761905, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR018044
- InterPro:   IPR001967 [H]

Pfam domain/function: PF00768 Peptidase_S11 [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 28576; Mature: 28576

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKFLSLLLLSPSLAIAQSYVVYDFTHDRILESRAANNVQPIASVTKLMTANIFLENNK
CHHHHHHHHHHCCCHHHHHEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCC
NKNCSASISDQDFDHIKGTGTKLPKHTPIACDELLKAMLVHSDNYAAHALSRSAGMSRAQ
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
FIQKMNQKAQQLGMRSTRFSDSSGLSSANISSALDLVKLAKYSLNNAKIQELSNTKAAYV
HHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEE
RVGKRNVFMQNTSALVREELFDAAINKTGYIRESGYNLVFVNKHQCNHATIGVISLNNRS
EECCCEEEECCHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCEEEEEEEECCCC
SATRSTLPKTNWNSTVAFP
CHHHHCCCCCCCCCEECCC
>Mature Secondary Structure
MLKKFLSLLLLSPSLAIAQSYVVYDFTHDRILESRAANNVQPIASVTKLMTANIFLENNK
CHHHHHHHHHHCCCHHHHHEEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCC
NKNCSASISDQDFDHIKGTGTKLPKHTPIACDELLKAMLVHSDNYAAHALSRSAGMSRAQ
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHH
FIQKMNQKAQQLGMRSTRFSDSSGLSSANISSALDLVKLAKYSLNNAKIQELSNTKAAYV
HHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEE
RVGKRNVFMQNTSALVREELFDAAINKTGYIRESGYNLVFVNKHQCNHATIGVISLNNRS
EECCCEEEECCHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCCCCEEEEEEEECCCC
SATRSTLPKTNWNSTVAFP
CHHHHCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]