Click here to switch to the map view.

The map label for this gene is parB [H]

Identifier: 126176555

GI number: 126176555

Start: 5117596

End: 5118474

Strand: Reverse

Name: parB [H]

Synonym: Sbal_4374

Alternate gene names: 126176555

Gene position: 5118474-5117596 (Counterclockwise)

Preceding gene: 126176556

Following gene: 126176554

Centisome position: 99.83

GC content: 42.32

Gene sequence:

>879_bases
ATGACGTTAAAGAAAAGAGGATTAGGCAAAGGGTTAGATGCCCTACTGAGTAACAGCCATGCCGCCAGTAAAAAACACAC
TGACGAAGCTAATGTTGTCGATAAAAAAGAAGAGCTTATCCATCTCGATTTAGACTTATTACAACCGGGTAAGTATCAAC
CTCGTAAAGACATGTCCCCCGAAGCGTTGGAAGAACTGGCGCATTCTATCCGCAACCAAGGCATTATTCAGCCCATCGTT
GTAAGACAAGTGGCAAACGACATGTATGAGATCATTGCGGGCGAACGTCGCTGGCGTGCTTCTCAACTTGCTGGCTTAAA
TAAAATCCCCTGCATAGTCAAACAAGTGCCCGATGAGGCCGCTGTTGCTATCGCTTTGATTGAAAACATCCAGCGTGAAG
ATTTAAATGCCATGGAAGAAGCCATTGCATTGCAACGTTTAATGCAAGAATTTGAACTGACTCACCAACAAGTTGCCGAT
GTTGTGGGAAAATCCAGAGCGAGTGTATCTAACTTGTTACGTTTAAACGGCTTAAATGAGCCGGTAAAACGTCTACTCGA
GTATGGCGACATCGATATGGGTCATGCTCGCGCTTTGTTAGCAATTGAGGGAGAAGAACAAACAAATCTTGCGAGATTAG
TGGCCGCTAAGGAATTAACCGTTCGCGAAACTGAACGATTAATTAATCAAACCTTAAATCCGCCTAAACAAGCCGAAACT
ACGACTAAAGATCAAGATGTTTGTCGTTTAGAGCAGCAGTTAATTGAAAGATTAGGTGCCAAGGTTTCTATCGCTCATAG
TAGTAAGGGCACAGGTAAAATTGTAATTAACTATCAGAATCTGGCTGAATTAGACGGAATTCTTAGTAAAATTCATTAA

Upstream 100 bases:

>100_bases
TAAATCGAGTGCCGGCGCTAAGGCGTATCTAGCGCTTGCGGGTGAAATGATCCGTCGTTCAGAACAACAAACTCAGGCTA
AGCAAGCGTAAAGGATCACC

Downstream 100 bases:

>100_bases
TGTCTGTAGATTAACAGTTTTTAATGTAAATTTGTGACAGATGCTAATCTTACATTTTAACTCGTTTGGCGCTAGATCAC
GTTAAAAGTGTTGTTTTTCC

Product: parB-like partition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MTLKKRGLGKGLDALLSNSHAASKKHTDEANVVDKKEELIHLDLDLLQPGKYQPRKDMSPEALEELAHSIRNQGIIQPIV
VRQVANDMYEIIAGERRWRASQLAGLNKIPCIVKQVPDEAAVAIALIENIQREDLNAMEEAIALQRLMQEFELTHQQVAD
VVGKSRASVSNLLRLNGLNEPVKRLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLNPPKQAET
TTKDQDVCRLEQQLIERLGAKVSIAHSSKGTGKIVINYQNLAELDGILSKIH

Sequences:

>Translated_292_residues
MTLKKRGLGKGLDALLSNSHAASKKHTDEANVVDKKEELIHLDLDLLQPGKYQPRKDMSPEALEELAHSIRNQGIIQPIV
VRQVANDMYEIIAGERRWRASQLAGLNKIPCIVKQVPDEAAVAIALIENIQREDLNAMEEAIALQRLMQEFELTHQQVAD
VVGKSRASVSNLLRLNGLNEPVKRLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLNPPKQAET
TTKDQDVCRLEQQLIERLGAKVSIAHSSKGTGKIVINYQNLAELDGILSKIH
>Mature_291_residues
TLKKRGLGKGLDALLSNSHAASKKHTDEANVVDKKEELIHLDLDLLQPGKYQPRKDMSPEALEELAHSIRNQGIIQPIVV
RQVANDMYEIIAGERRWRASQLAGLNKIPCIVKQVPDEAAVAIALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADV
VGKSRASVSNLLRLNGLNEPVKRLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLNPPKQAETT
TKDQDVCRLEQQLIERLGAKVSIAHSSKGTGKIVINYQNLAELDGILSKIH

Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication [H]

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115
- InterPro:   IPR013741 [H]

Pfam domain/function: PF08535 KorB; PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 32495; Mature: 32364

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKKRGLGKGLDALLSNSHAASKKHTDEANVVDKKEELIHLDLDLLQPGKYQPRKDMSP
CCCCCCCCCHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
EALEELAHSIRNQGIIQPIVVRQVANDMYEIIAGERRWRASQLAGLNKIPCIVKQVPDEA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHCCCHH
AVAIALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADVVGKSRASVSNLLRLNGLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PVKRLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLNPPKQAET
HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
TTKDQDVCRLEQQLIERLGAKVSIAHSSKGTGKIVINYQNLAELDGILSKIH
CCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLKKRGLGKGLDALLSNSHAASKKHTDEANVVDKKEELIHLDLDLLQPGKYQPRKDMSP
CCCCCCCCHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
EALEELAHSIRNQGIIQPIVVRQVANDMYEIIAGERRWRASQLAGLNKIPCIVKQVPDEA
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHCCCHH
AVAIALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADVVGKSRASVSNLLRLNGLNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
PVKRLLEYGDIDMGHARALLAIEGEEQTNLARLVAAKELTVRETERLINQTLNPPKQAET
HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
TTKDQDVCRLEQQLIERLGAKVSIAHSSKGTGKIVINYQNLAELDGILSKIH
CCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]