| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176535
Identifier: 126176535
GI number: 126176535
Start: 5094091
End: 5094642
Strand: Reverse
Name: 126176535
Synonym: Sbal_4354
Alternate gene names: NA
Gene position: 5094642-5094091 (Counterclockwise)
Preceding gene: 126176536
Following gene: 126176534
Centisome position: 99.36
GC content: 36.96
Gene sequence:
>552_bases ATGCCTCAATCGAAAATACTGGTCGATACTAATACCTACTTAAGATTAGCAAAAACAATAAAGCCACTATTGTTTATGCC TTTTGGCGTTAATGAATATTGCTTGTATATTTTACCTGAATTGAATAAAGAGCTTGGTACTCGAACGCTACAAAGCAAAT TTCCTTGGGTAGAGGAACAAGAGTTTTCAGAAAATCGTAAACATTTTCCTAGTATTGGTCGAAAACAAAAAAAATCAATT GAGCACGCCTTTGAATTTATATGGGAACATGTTCAAACGGAGCTGCCAGGACCATCGAAAGTTGATGCCTTGTATGTTGC TTATGCGTTGGAGCTAGGTGTACCACTGATTACAGATGATCAAGATATGGCTGAATTAGCCAAAGTTTTTGACGTGCAAG TCATGTCTACACTTGAGCTTCTTAAAATCATGTTAGATTGCGGCCATACCGATATGAAAACGATTGATGGTTTATGTGAT TACTGGCGTTACATTTCAGATATGCCAGCTCGATTTCATTTTGATTACAAACGTTTATTTGGTGCCAAGTAG
Upstream 100 bases:
>100_bases GAAAGTACCTCAAAGAACACGATAAAGGCCCTGGTTTTGTTCAAACTGTACTGGATATGCCTCTTCTTGATGCGCGAAGT ATCCATACAGAGCTAACCTA
Downstream 100 bases:
>100_bases CTCAAAATATTACATTCTTTCTTGTACTCCTTGCCATATACGATATATTGACAGTCTTGTACTTTCTCGACATTGGTGAG ACTTTTCGTCATGAGCACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MPQSKILVDTNTYLRLAKTIKPLLFMPFGVNEYCLYILPELNKELGTRTLQSKFPWVEEQEFSENRKHFPSIGRKQKKSI EHAFEFIWEHVQTELPGPSKVDALYVAYALELGVPLITDDQDMAELAKVFDVQVMSTLELLKIMLDCGHTDMKTIDGLCD YWRYISDMPARFHFDYKRLFGAK
Sequences:
>Translated_183_residues MPQSKILVDTNTYLRLAKTIKPLLFMPFGVNEYCLYILPELNKELGTRTLQSKFPWVEEQEFSENRKHFPSIGRKQKKSI EHAFEFIWEHVQTELPGPSKVDALYVAYALELGVPLITDDQDMAELAKVFDVQVMSTLELLKIMLDCGHTDMKTIDGLCD YWRYISDMPARFHFDYKRLFGAK >Mature_182_residues PQSKILVDTNTYLRLAKTIKPLLFMPFGVNEYCLYILPELNKELGTRTLQSKFPWVEEQEFSENRKHFPSIGRKQKKSIE HAFEFIWEHVQTELPGPSKVDALYVAYALELGVPLITDDQDMAELAKVFDVQVMSTLELLKIMLDCGHTDMKTIDGLCDY WRYISDMPARFHFDYKRLFGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21360; Mature: 21229
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSKILVDTNTYLRLAKTIKPLLFMPFGVNEYCLYILPELNKELGTRTLQSKFPWVEEQ CCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCH EFSENRKHFPSIGRKQKKSIEHAFEFIWEHVQTELPGPSKVDALYVAYALELGVPLITDD HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECC QDMAELAKVFDVQVMSTLELLKIMLDCGHTDMKTIDGLCDYWRYISDMPARFHFDYKRLF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC GAK CCC >Mature Secondary Structure PQSKILVDTNTYLRLAKTIKPLLFMPFGVNEYCLYILPELNKELGTRTLQSKFPWVEEQ CCCCEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCH EFSENRKHFPSIGRKQKKSIEHAFEFIWEHVQTELPGPSKVDALYVAYALELGVPLITDD HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECC QDMAELAKVFDVQVMSTLELLKIMLDCGHTDMKTIDGLCDYWRYISDMPARFHFDYKRLF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC GAK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA