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The map label for this gene is yibQ [H]

Identifier: 126176516

GI number: 126176516

Start: 5068692

End: 5069447

Strand: Direct

Name: yibQ [H]

Synonym: Sbal_4335

Alternate gene names: 126176516

Gene position: 5068692-5069447 (Clockwise)

Preceding gene: 126176515

Following gene: 126176520

Centisome position: 98.86

GC content: 45.9

Gene sequence:

>756_bases
GTGCGCTTACTTTATTCCTTGGCCCTATTGGCCCTAAGCATTTCTCAAAGTCATGCTGCCCAGATTGCGCTCATTATTGA
TGACATAGGTTATCGTCATACCGATCAAGCCGTGCTGGCACTGCCCAGCACAGTGACGCTCTCTGTGTTGCCTCATACTC
CTCTTGGCGAAGAACTCGCCAATGCTGGCCATAAAAAGGGCCACGAAATCATGCTGCATCTGCCTATGCAAGCACTTAAT
GGTAAGGCGTTAGGGCTGGGTGGATTGACCAATACTATGACTGAGGCACAAATCCGCGCCAGTGTTGTCGATGCAATTAA
CAGCGTTCCTTTTGCTAAAGGTGCCAATAACCACATGGGGAGCTTACTGACTCAACTCGATGATCCTATGCTTTGGATTA
TGGAAACCCTCAAACAAAAGCATCTGTATTTTATCGATAGTATGACAACAAGATTCACTAAGGCGGGAGAGACAGCGGAT
CAGTTGGGCGTGCCGTTATTAAAACGCCAACTGTTTCTAGACAATGATACCAGTGCTAAAGCACTCGAAAGACAATTTAA
CTTAATGATAAGTCAGGCACATACTCAAGGTAACCTAGTGGCGATTGCCCATCCTTATCCAGAAACCATGCGCTTCTTAA
AGGCCAATCTACAAAGACTAAAAACCGAGGGGATTGATCTAGTACCTGCATCAAGCTTACTCCCCATCGGCATTGCACAC
AAAAATGGAACTAATCCAGCTGTAACACTGAGATAG

Upstream 100 bases:

>100_bases
TATAATCGACGCCCTATCCGCCCATGCATCTCTGGCCCAAGATCATCAAGTGACCTCGGCGATTGCATGGATACAGCATC
ATGACTAATAAGAAGAAACT

Downstream 100 bases:

>100_bases
ACATGTCAGGCAGCAAGGCAAGTAACTCATCACGATTACTCACAATGTCCAACAGAGTATATTGATCGAGCACATTCAAA
TACGCTTCAACTGCTTGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRLLYSLALLALSISQSHAAQIALIIDDIGYRHTDQAVLALPSTVTLSVLPHTPLGEELANAGHKKGHEIMLHLPMQALN
GKALGLGGLTNTMTEAQIRASVVDAINSVPFAKGANNHMGSLLTQLDDPMLWIMETLKQKHLYFIDSMTTRFTKAGETAD
QLGVPLLKRQLFLDNDTSAKALERQFNLMISQAHTQGNLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSLLPIGIAH
KNGTNPAVTLR

Sequences:

>Translated_251_residues
MRLLYSLALLALSISQSHAAQIALIIDDIGYRHTDQAVLALPSTVTLSVLPHTPLGEELANAGHKKGHEIMLHLPMQALN
GKALGLGGLTNTMTEAQIRASVVDAINSVPFAKGANNHMGSLLTQLDDPMLWIMETLKQKHLYFIDSMTTRFTKAGETAD
QLGVPLLKRQLFLDNDTSAKALERQFNLMISQAHTQGNLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSLLPIGIAH
KNGTNPAVTLR
>Mature_251_residues
MRLLYSLALLALSISQSHAAQIALIIDDIGYRHTDQAVLALPSTVTLSVLPHTPLGEELANAGHKKGHEIMLHLPMQALN
GKALGLGGLTNTMTEAQIRASVVDAINSVPFAKGANNHMGSLLTQLDDPMLWIMETLKQKHLYFIDSMTTRFTKAGETAD
QLGVPLLKRQLFLDNDTSAKALERQFNLMISQAHTQGNLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSLLPIGIAH
KNGTNPAVTLR

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=217, Percent_Identity=40.5529953917051, Blast_Score=165, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 27320; Mature: 27320

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLYSLALLALSISQSHAAQIALIIDDIGYRHTDQAVLALPSTVTLSVLPHTPLGEELA
CHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEECCCEEEEEECCCCCCCHHHH
NAGHKKGHEIMLHLPMQALNGKALGLGGLTNTMTEAQIRASVVDAINSVPFAKGANNHMG
HCCCCCCCEEEEEECHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
SLLTQLDDPMLWIMETLKQKHLYFIDSMTTRFTKAGETADQLGVPLLKRQLFLDNDTSAK
HHHHHHCCHHHHHHHHHHHHHEEEEHHHHHHHHHCCCCHHHHCHHHHHHHHHCCCCCHHH
ALERQFNLMISQAHTQGNLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSLLPIGIAH
HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEE
KNGTNPAVTLR
CCCCCCEEEEC
>Mature Secondary Structure
MRLLYSLALLALSISQSHAAQIALIIDDIGYRHTDQAVLALPSTVTLSVLPHTPLGEELA
CHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEECCCEEEEEECCCCCCCHHHH
NAGHKKGHEIMLHLPMQALNGKALGLGGLTNTMTEAQIRASVVDAINSVPFAKGANNHMG
HCCCCCCCEEEEEECHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
SLLTQLDDPMLWIMETLKQKHLYFIDSMTTRFTKAGETADQLGVPLLKRQLFLDNDTSAK
HHHHHHCCHHHHHHHHHHHHHEEEEHHHHHHHHHCCCCHHHHCHHHHHHHHHCCCCCHHH
ALERQFNLMISQAHTQGNLVAIAHPYPETMRFLKANLQRLKTEGIDLVPASSLLPIGIAH
HHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEE
KNGTNPAVTLR
CCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]