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The map label for this gene is yibP [H]

Identifier: 126176514

GI number: 126176514

Start: 5066353

End: 5067441

Strand: Direct

Name: yibP [H]

Synonym: Sbal_4333

Alternate gene names: 126176514

Gene position: 5066353-5067441 (Clockwise)

Preceding gene: 126176513

Following gene: 126176515

Centisome position: 98.81

GC content: 47.02

Gene sequence:

>1089_bases
ATGATGTTATCTTTCTCGGCCAACGCTTCTGATTTGGAGAAGCGTCAGTCCGAGTTGAAATCAATCCAAACGCAAATAAA
TCAACAACAAAGCGCGTTAAAAAACACCAGTAAACAAAGAGAAAAATTGCTGTCATTGCTGCGTAGCGATGAAGAAGCGA
TTGCGTCAGCGGCCAAAAAAGTCAACAGCACCAAAAATAGCTTAGCGCAAATAGACACGAAACTGATCGAGCTGAAACAA
CGTCAAGATGAGTTAGAAACGCTAAAAGTGAGTCAGCAACAGACACTGTCGAAACAGCTGTCGAGCGCCTATCTTGCCGG
TAATCACGATTACACTAAGATGATGCTCAACCAGCAAAGTCCTGCCACTATCGAGCGTATGTTGGCCTATTACCAATACC
TCAATAAAGCGCGGATGAAGTCGATCAACGAATTAAAGCAAACCTTGACCGAGCTAGATGAGATCAAGGTGTCGCAAACG
AGTAAGCAAAAGCAATTAACCAAACTCGTGGCCGAACAACAGGTCCAAGCCAAACGTTTGAGCCAAGAGCAAGATCAGCG
ACAACTGACCATCAAAGAGCTGCAACGCACCTTAAATTCTAAGGGCGCTGAGCTGGAGCAGTTGCAAATTGAAGAGGCCA
GCTTAAAGCGTGTGGTCGAACAAGCGCTGCGGGCCATGAAAGACAATCCTTCGATGGAAGGTTTTGGTAAACAAAGTGGC
AAACTCAAATGGCCGACTAAAGGTCGCGTCAGTGCCAACTTTGGCAGCCAACGTTCCGGCCAAGTGGTGTGGAAAGGCAC
TATGTTATCCGCACCAGAAGGGCAAAATATTCGAGCCGTTTCAGGTGGTAAGGTTATTTATGCCGACTGGTTACGCGGTT
TTGGTTTAGTGATGGTTATCGATCATGGCAAAGGTTATATGAGCCTGTACGGCCATGCTCAAACCCTATTAAAAAGCCCT
GGCGACATGGTAAAAAGCGGCGAAGCGATAGCTTTAGTCGGACGTTCGGGTGGACAGAGCGAGGCTGGCCTATACTTTGA
AATAAGGCACAAGGGGCAAGCCGTCGATCCAGCGAAATACTGTCGCTAA

Upstream 100 bases:

>100_bases
CCAGCAGAGATGACGGGCAAGCCCTTAATCCACATTAAAGAGTAACCGTTACCTAGTGAGCACTCGACTCCTTGTTAAAG
CCAGCATTCTTGCTGGCTTT

Downstream 100 bases:

>100_bases
TCATAACGGTCCCCTCATCACAGGGGACGGCTATGAAACACATGATCCGCTATATCAGTTGCGTTGGATTAGGCCTAACT
TTGGGCCTATCCATCAGCCT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MMLSFSANASDLEKRQSELKSIQTQINQQQSALKNTSKQREKLLSLLRSDEEAIASAAKKVNSTKNSLAQIDTKLIELKQ
RQDELETLKVSQQQTLSKQLSSAYLAGNHDYTKMMLNQQSPATIERMLAYYQYLNKARMKSINELKQTLTELDEIKVSQT
SKQKQLTKLVAEQQVQAKRLSQEQDQRQLTIKELQRTLNSKGAELEQLQIEEASLKRVVEQALRAMKDNPSMEGFGKQSG
KLKWPTKGRVSANFGSQRSGQVVWKGTMLSAPEGQNIRAVSGGKVIYADWLRGFGLVMVIDHGKGYMSLYGHAQTLLKSP
GDMVKSGEAIALVGRSGGQSEAGLYFEIRHKGQAVDPAKYCR

Sequences:

>Translated_362_residues
MMLSFSANASDLEKRQSELKSIQTQINQQQSALKNTSKQREKLLSLLRSDEEAIASAAKKVNSTKNSLAQIDTKLIELKQ
RQDELETLKVSQQQTLSKQLSSAYLAGNHDYTKMMLNQQSPATIERMLAYYQYLNKARMKSINELKQTLTELDEIKVSQT
SKQKQLTKLVAEQQVQAKRLSQEQDQRQLTIKELQRTLNSKGAELEQLQIEEASLKRVVEQALRAMKDNPSMEGFGKQSG
KLKWPTKGRVSANFGSQRSGQVVWKGTMLSAPEGQNIRAVSGGKVIYADWLRGFGLVMVIDHGKGYMSLYGHAQTLLKSP
GDMVKSGEAIALVGRSGGQSEAGLYFEIRHKGQAVDPAKYCR
>Mature_362_residues
MMLSFSANASDLEKRQSELKSIQTQINQQQSALKNTSKQREKLLSLLRSDEEAIASAAKKVNSTKNSLAQIDTKLIELKQ
RQDELETLKVSQQQTLSKQLSSAYLAGNHDYTKMMLNQQSPATIERMLAYYQYLNKARMKSINELKQTLTELDEIKVSQT
SKQKQLTKLVAEQQVQAKRLSQEQDQRQLTIKELQRTLNSKGAELEQLQIEEASLKRVVEQALRAMKDNPSMEGFGKQSG
KLKWPTKGRVSANFGSQRSGQVVWKGTMLSAPEGQNIRAVSGGKVIYADWLRGFGLVMVIDHGKGYMSLYGHAQTLLKSP
GDMVKSGEAIALVGRSGGQSEAGLYFEIRHKGQAVDPAKYCR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=395, Percent_Identity=33.4177215189873, Blast_Score=229, Evalue=3e-61,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=41.1764705882353, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI87082174, Length=118, Percent_Identity=38.135593220339, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081989, Length=131, Percent_Identity=32.824427480916, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 40488; Mature: 40488

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLSFSANASDLEKRQSELKSIQTQINQQQSALKNTSKQREKLLSLLRSDEEAIASAAKK
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VNSTKNSLAQIDTKLIELKQRQDELETLKVSQQQTLSKQLSSAYLAGNHDYTKMMLNQQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
PATIERMLAYYQYLNKARMKSINELKQTLTELDEIKVSQTSKQKQLTKLVAEQQVQAKRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQEQDQRQLTIKELQRTLNSKGAELEQLQIEEASLKRVVEQALRAMKDNPSMEGFGKQSG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
KLKWPTKGRVSANFGSQRSGQVVWKGTMLSAPEGQNIRAVSGGKVIYADWLRGFGLVMVI
EEECCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCEEEHHHHHHCCEEEEE
DHGKGYMSLYGHAQTLLKSPGDMVKSGEAIALVGRSGGQSEAGLYFEIRHKGQAVDPAKY
ECCCCHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCHHHH
CR
CC
>Mature Secondary Structure
MMLSFSANASDLEKRQSELKSIQTQINQQQSALKNTSKQREKLLSLLRSDEEAIASAAKK
CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VNSTKNSLAQIDTKLIELKQRQDELETLKVSQQQTLSKQLSSAYLAGNHDYTKMMLNQQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
PATIERMLAYYQYLNKARMKSINELKQTLTELDEIKVSQTSKQKQLTKLVAEQQVQAKRL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQEQDQRQLTIKELQRTLNSKGAELEQLQIEEASLKRVVEQALRAMKDNPSMEGFGKQSG
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
KLKWPTKGRVSANFGSQRSGQVVWKGTMLSAPEGQNIRAVSGGKVIYADWLRGFGLVMVI
EEECCCCCCEECCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCEEEHHHHHHCCEEEEE
DHGKGYMSLYGHAQTLLKSPGDMVKSGEAIALVGRSGGQSEAGLYFEIRHKGQAVDPAKY
ECCCCHHHHHHHHHHHHHCCCHHHHCCCEEEEEECCCCCCCCCEEEEEECCCCCCCHHHH
CR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]