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The map label for this gene is tnsC [H]

Identifier: 126176503

GI number: 126176503

Start: 5053951

End: 5055387

Strand: Reverse

Name: tnsC [H]

Synonym: Sbal_4322

Alternate gene names: 126176503

Gene position: 5055387-5053951 (Counterclockwise)

Preceding gene: 126176504

Following gene: 126176502

Centisome position: 98.6

GC content: 38.14

Gene sequence:

>1437_bases
ATGTATGTTGAGAATGCCTGTTATCAAAAAGCTATTTTACCTGAACACGTCGGGAATGCACTTATTGAATCACTCCCTAA
GAAATTAACGGATGAAGAGTTAGTGGATAAATTGGCAAATTATCCAAAGTGCTTAACCGAGGATACTCAAAACGATCCTG
AAATTCGCGCGGAGTACTTAACTCGTATAAAAAGACTTCGCCAGCCTCAGCTAGTCTACTTTGATGTCTTTAGGGCTGTT
GAAATCGCGATAAAAGATGGATATTCAGCTAAAAACCCTTTGTCGCCAACTACAATGAATTACCTTCATTATTCACTGGA
GGATAGGCCTATTATTGAGCCTAATACTGGATTTTTTAAACCTAAAGGGTGTGGGATAACTATCATCGGCGAAAGCGGCG
TTGGTAAAACATCAATGCTAGAGCAGGTGTTGAGTATCTATCCAGATGTAATTAAACATCAATCTTATAGCGGTATGTCA
TTACCATTAACACAAGTTGTGTGGCTTAAGGTCGATTGCCCTGATGATTCAAGTGTTAAAGGGCTTTGTCATCGAATTTT
AGATGAAATTGATAGAAAGCTCGATATTAAGGATACTAAACCACAAAATACTATTGCACTTTTAATAAAGCAGATTGAAG
CAAAAATGAAGTCTAATTATTTAGGGATCTTAGTCATAGATGAGATGCAAAACCTAAATACAGCTAAAGCAGGTGGCGCA
GAGCGATTATTAGGTTTCTTACATAATTTGATGAATAACCTTGGCATACCGATTTTATTTTGTGCCAATCCCCCATTTGA
TAAGTTATTAAGCAAAACACTTAAAGCTGCACGACGAGCAGAAAGTGGAGGCTATTTTGACATTGGTTTACTTAAAAACT
CAGAAGATGAATGGGGACTTTTTGTCGATGAATTATGGAAGTTACAGTGGACTAACGTTCAAACTCCATTGACTCAGGAC
TTGAGTGACAGACTTTTTAATTTGTCAGTTGGTAATATGGACCTTGCTGTGCGAATATTTTACGCTTCACAACGAGCAGT
AATAGGCTCATTAAATGAGCGGATTACTACCGATGTATTGGATAAAGGAGCAAGTATTGCTATTAGAGCATCGAAGTCTA
CAACTGATGAATTAAGGCTTTCTCTATTAAAGCGTAAAAACGAATCTAAAAAAGAGACGCCAAACAATGAGGCTTCAGAA
GAAGCTAAAGTGATTACTGAATCCAAAGGTAAATTCGTTACGATACCTGGTGATCTAAGTCGCCCTCACCATCCTGAATT
TGCTGAGCGTATCACTGAATTACAGTATGAGGATGATTTACATGCCTTGATAGAAGATCCTGCATTAATACAGAGAGCAT
CAGAAGAGGAACACCCTTTAGATATGCTTAAGTCGGCAGGACTTTTCTGTGAAGACCCGCTCAAGACTTTCGGTTAG

Upstream 100 bases:

>100_bases
TAGAACGCAAAAATGAAGAGACTAATTATGTTGAGCAATGGTCAGAAGAGCGGAATAAAAAAGTGGTGTCATTGCTGAAG
CGTAAAAAGGATAATGATTA

Downstream 100 bases:

>100_bases
TGTTTGAGCCATGCTTTTGCCTCCACTGCTACCAGATGAGTTGTTGCTAGGACGGTTAATCCGTTATCTGGCTATATCTG
GTGATGAGGTAGGAGCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Protein E [H]

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MYVENACYQKAILPEHVGNALIESLPKKLTDEELVDKLANYPKCLTEDTQNDPEIRAEYLTRIKRLRQPQLVYFDVFRAV
EIAIKDGYSAKNPLSPTTMNYLHYSLEDRPIIEPNTGFFKPKGCGITIIGESGVGKTSMLEQVLSIYPDVIKHQSYSGMS
LPLTQVVWLKVDCPDDSSVKGLCHRILDEIDRKLDIKDTKPQNTIALLIKQIEAKMKSNYLGILVIDEMQNLNTAKAGGA
ERLLGFLHNLMNNLGIPILFCANPPFDKLLSKTLKAARRAESGGYFDIGLLKNSEDEWGLFVDELWKLQWTNVQTPLTQD
LSDRLFNLSVGNMDLAVRIFYASQRAVIGSLNERITTDVLDKGASIAIRASKSTTDELRLSLLKRKNESKKETPNNEASE
EAKVITESKGKFVTIPGDLSRPHHPEFAERITELQYEDDLHALIEDPALIQRASEEEHPLDMLKSAGLFCEDPLKTFG

Sequences:

>Translated_478_residues
MYVENACYQKAILPEHVGNALIESLPKKLTDEELVDKLANYPKCLTEDTQNDPEIRAEYLTRIKRLRQPQLVYFDVFRAV
EIAIKDGYSAKNPLSPTTMNYLHYSLEDRPIIEPNTGFFKPKGCGITIIGESGVGKTSMLEQVLSIYPDVIKHQSYSGMS
LPLTQVVWLKVDCPDDSSVKGLCHRILDEIDRKLDIKDTKPQNTIALLIKQIEAKMKSNYLGILVIDEMQNLNTAKAGGA
ERLLGFLHNLMNNLGIPILFCANPPFDKLLSKTLKAARRAESGGYFDIGLLKNSEDEWGLFVDELWKLQWTNVQTPLTQD
LSDRLFNLSVGNMDLAVRIFYASQRAVIGSLNERITTDVLDKGASIAIRASKSTTDELRLSLLKRKNESKKETPNNEASE
EAKVITESKGKFVTIPGDLSRPHHPEFAERITELQYEDDLHALIEDPALIQRASEEEHPLDMLKSAGLFCEDPLKTFG
>Mature_478_residues
MYVENACYQKAILPEHVGNALIESLPKKLTDEELVDKLANYPKCLTEDTQNDPEIRAEYLTRIKRLRQPQLVYFDVFRAV
EIAIKDGYSAKNPLSPTTMNYLHYSLEDRPIIEPNTGFFKPKGCGITIIGESGVGKTSMLEQVLSIYPDVIKHQSYSGMS
LPLTQVVWLKVDCPDDSSVKGLCHRILDEIDRKLDIKDTKPQNTIALLIKQIEAKMKSNYLGILVIDEMQNLNTAKAGGA
ERLLGFLHNLMNNLGIPILFCANPPFDKLLSKTLKAARRAESGGYFDIGLLKNSEDEWGLFVDELWKLQWTNVQTPLTQD
LSDRLFNLSVGNMDLAVRIFYASQRAVIGSLNERITTDVLDKGASIAIRASKSTTDELRLSLLKRKNESKKETPNNEASE
EAKVITESKGKFVTIPGDLSRPHHPEFAERITELQYEDDLHALIEDPALIQRASEEEHPLDMLKSAGLFCEDPLKTFG

Specific function: TnsABC + tnsD promote high-frequency insertion of Tn7 into a specific target site known as att-Tn7 whereas tnsABC + tnsE promote low-frequency insertion into many different sites [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR021542 [H]

Pfam domain/function: PF00004 AAA; PF11426 Tn7_TnsC [H]

EC number: NA

Molecular weight: Translated: 53781; Mature: 53781

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVENACYQKAILPEHVGNALIESLPKKLTDEELVDKLANYPKCLTEDTQNDPEIRAEYL
CCCCHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCHHHHHHHH
TRIKRLRQPQLVYFDVFRAVEIAIKDGYSAKNPLSPTTMNYLHYSLEDRPIIEPNTGFFK
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCC
PKGCGITIIGESGVGKTSMLEQVLSIYPDVIKHQSYSGMSLPLTQVVWLKVDCPDDSSVK
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCHHH
GLCHRILDEIDRKLDIKDTKPQNTIALLIKQIEAKMKSNYLGILVIDEMQNLNTAKAGGA
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCH
ERLLGFLHNLMNNLGIPILFCANPPFDKLLSKTLKAARRAESGGYFDIGLLKNSEDEWGL
HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCH
FVDELWKLQWTNVQTPLTQDLSDRLFNLSVGNMDLAVRIFYASQRAVIGSLNERITTDVL
HHHHHHHEECCCCCCCHHHHHHHHHEECEECCCEEEEEEEEECCHHHHHHHHHHHHHHHH
DKGASIAIRASKSTTDELRLSLLKRKNESKKETPNNEASEEAKVITESKGKFVTIPGDLS
CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCC
RPHHPEFAERITELQYEDDLHALIEDPALIQRASEEEHPLDMLKSAGLFCEDPLKTFG
CCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHCC
>Mature Secondary Structure
MYVENACYQKAILPEHVGNALIESLPKKLTDEELVDKLANYPKCLTEDTQNDPEIRAEYL
CCCCHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHCCCCCCCHHHHHHHH
TRIKRLRQPQLVYFDVFRAVEIAIKDGYSAKNPLSPTTMNYLHYSLEDRPIIEPNTGFFK
HHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCC
PKGCGITIIGESGVGKTSMLEQVLSIYPDVIKHQSYSGMSLPLTQVVWLKVDCPDDSSVK
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCHHH
GLCHRILDEIDRKLDIKDTKPQNTIALLIKQIEAKMKSNYLGILVIDEMQNLNTAKAGGA
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCH
ERLLGFLHNLMNNLGIPILFCANPPFDKLLSKTLKAARRAESGGYFDIGLLKNSEDEWGL
HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCH
FVDELWKLQWTNVQTPLTQDLSDRLFNLSVGNMDLAVRIFYASQRAVIGSLNERITTDVL
HHHHHHHEECCCCCCCHHHHHHHHHEECEECCCEEEEEEEEECCHHHHHHHHHHHHHHHH
DKGASIAIRASKSTTDELRLSLLKRKNESKKETPNNEASEEAKVITESKGKFVTIPGDLS
CCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCEEECCCCCC
RPHHPEFAERITELQYEDDLHALIEDPALIQRASEEEHPLDMLKSAGLFCEDPLKTFG
CCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2156235; 3022239; 1655576; 1317955 [H]