| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176491
Identifier: 126176491
GI number: 126176491
Start: 5042958
End: 5044814
Strand: Direct
Name: 126176491
Synonym: Sbal_4307
Alternate gene names: NA
Gene position: 5042958-5044814 (Clockwise)
Preceding gene: 126176490
Following gene: 126176492
Centisome position: 98.35
GC content: 36.78
Gene sequence:
>1857_bases ATGGGTAATATGGCGATAAGTGGTACAGCAGATATCACTCATGAAGGAATTAAAAAGCATTTTACGAAATGGAAGAAATA CCCATTCCAATCAGTTATTGAACTGATCGCTAATGGATTTGATTCTGGCGCAACATCTGTTGATGTCACGATTGAGCACA ATGAGATGCATGGTCTAGCAGCTATATCTGTATTGGACAACGGGTCGGGTATTGATATAAAAGAATGCGATCAGCATTTT TCTAGGTTTAATGAATCTTCAAAGCAAGGTGATGATGACCTCCAAGGTGCACACGGAAAGGGAAGGCTTGCTTTTCATTT ACTCTGCTCAAATGCAACTTGGTACACCAAATGCCATGACTCTGAATCTAAGATATTCATAGATAGTCTTACACTGCGTA ATTTTTCAGCAAAAGAGATTTCACCTAAAGAGCAGCATGCTCCATTAAGCTTATTTAAATCTGGTACATGTGTAGTTCTT ACCAATTTCCATACTAACCTGCCCGAACTAGATGTAATTAGAAAAAATCTTGAAAGTTATTTTGGTTGGAGATTAATTCT AAATCCTGAGCGAAAGTTAACGGTTAATGGAGTAGAAGTTGACATCCCTGAAAGTGATCTGATTAAGAAAAATATTTGTA TTAATGGTGCTGAATTCAAAATTGATTTTATTCGCTGGATAGATAAGCCTGGTGATGAAAAGTCATACAACTATGTGGTT AACCATGATGGGCGGGTATTGCACCGCGATTTAAGCAGTTTTAATAAAAAGCCAAACTTTCATCTTAGCTCTTATTCCAG ATCGGATTGGTTCGATAATTTTGATAAAAGTAGTTCGTCCCTAAATTTTACGGATACCCCGCAGGTTAGCCCAGATTCTA CTGAATTTAAGAAGTTAAAAAAGGCAATACATGACTTCAGTAGCGATATATATGAAGAATTTCTTCGGGAGTTTGTTGAA GAAAAAATCGAAGAGTATGAAGCCCGTGGCTATTTTCCAGAGCATAAAAGTCTAAAAGCGGAAGAGGCGGCTTGGAGAAG GGAAAATACCAAGTCATTTGTAAAATCTCTTTATTTGGCTGACCCAACAATTTTCAATAACATCAAAGAAAAGCCTGTAA AGATATTATTGGCGCTAATTGATAAGATCCTTGTATCCAATGAGAATGACACCATTTTTGAGATTATTGGCGAGATTCTT AATCTAGATGAAAATCAAATCAATATATTCTCAAGACAGATTAAAAATTCATCACTAAAAAATATTGTTAGTACTATCGA AGTACTCCAAAAGAGAGAGCTTGCTGTTCACAAACTTCGAGAAATAATGGTTAAGCACTATCGAGAAGTCCTTGAGACGC CTGATTTACAAGGGATTATCGAGAGTAACACTTGGCTTTTCGGTAACAAATACACGATGCTCGGTGCTGAAGAGGATGAT TTCCAAAAAATATCTTTGAATCTTAGGAAACATGTTAAAGGAATAGATTTAATTGATGAAGGTGATTTAGAGTCAACGGA TTTAGAAGAAGAGCTAGACATTGACGGTGTCAGACGGCAGGTAGACTTATTTTTAGCTAGAAAAAATATTGGATTCAATT CTAGAGGAGAGTCTTACTACCAGTGTACGATAATCGAAATAAAAAGACCGGCAATTGCACTCAACGAAAAGCATCTTAAG CAAATTCGAGATTACGCTCGGATAATATCGGAGCACTCGGGCTTCTCCATGGAGAAGATGAGGTTTGAAATTATACTGGT CGGTAGAAAAATATCTGAGAAAGATTTCGACATCCATTCAGCTTTAGAAACAGCAGTTGCTAAGAACTGTTCTGGTCTAA TCCCATCGGACACTTAA
Upstream 100 bases:
>100_bases TTAGATAAACGCGCATGCACACTAATAAAATATTAAATGCGTAGCAAAAAGCGGTGCTTCAAAAGCTTAAACTAATCACA CAAATAATATGGATTTTTAA
Downstream 100 bases:
>100_bases TTTTGAGACAGTATGGTCAATAAATTAAGAGGTCTATATGAGTCTGAAGAAATCACATAAGAGTTATCCGCAGGCATTTA AAGATGAAGCCGTCTTGATG
Product: putative DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 617
Protein sequence:
>618_residues MGNMAISGTADITHEGIKKHFTKWKKYPFQSVIELIANGFDSGATSVDVTIEHNEMHGLAAISVLDNGSGIDIKECDQHF SRFNESSKQGDDDLQGAHGKGRLAFHLLCSNATWYTKCHDSESKIFIDSLTLRNFSAKEISPKEQHAPLSLFKSGTCVVL TNFHTNLPELDVIRKNLESYFGWRLILNPERKLTVNGVEVDIPESDLIKKNICINGAEFKIDFIRWIDKPGDEKSYNYVV NHDGRVLHRDLSSFNKKPNFHLSSYSRSDWFDNFDKSSSSLNFTDTPQVSPDSTEFKKLKKAIHDFSSDIYEEFLREFVE EKIEEYEARGYFPEHKSLKAEEAAWRRENTKSFVKSLYLADPTIFNNIKEKPVKILLALIDKILVSNENDTIFEIIGEIL NLDENQINIFSRQIKNSSLKNIVSTIEVLQKRELAVHKLREIMVKHYREVLETPDLQGIIESNTWLFGNKYTMLGAEEDD FQKISLNLRKHVKGIDLIDEGDLESTDLEEELDIDGVRRQVDLFLARKNIGFNSRGESYYQCTIIEIKRPAIALNEKHLK QIRDYARIISEHSGFSMEKMRFEIILVGRKISEKDFDIHSALETAVAKNCSGLIPSDT
Sequences:
>Translated_618_residues MGNMAISGTADITHEGIKKHFTKWKKYPFQSVIELIANGFDSGATSVDVTIEHNEMHGLAAISVLDNGSGIDIKECDQHF SRFNESSKQGDDDLQGAHGKGRLAFHLLCSNATWYTKCHDSESKIFIDSLTLRNFSAKEISPKEQHAPLSLFKSGTCVVL TNFHTNLPELDVIRKNLESYFGWRLILNPERKLTVNGVEVDIPESDLIKKNICINGAEFKIDFIRWIDKPGDEKSYNYVV NHDGRVLHRDLSSFNKKPNFHLSSYSRSDWFDNFDKSSSSLNFTDTPQVSPDSTEFKKLKKAIHDFSSDIYEEFLREFVE EKIEEYEARGYFPEHKSLKAEEAAWRRENTKSFVKSLYLADPTIFNNIKEKPVKILLALIDKILVSNENDTIFEIIGEIL NLDENQINIFSRQIKNSSLKNIVSTIEVLQKRELAVHKLREIMVKHYREVLETPDLQGIIESNTWLFGNKYTMLGAEEDD FQKISLNLRKHVKGIDLIDEGDLESTDLEEELDIDGVRRQVDLFLARKNIGFNSRGESYYQCTIIEIKRPAIALNEKHLK QIRDYARIISEHSGFSMEKMRFEIILVGRKISEKDFDIHSALETAVAKNCSGLIPSDT >Mature_617_residues GNMAISGTADITHEGIKKHFTKWKKYPFQSVIELIANGFDSGATSVDVTIEHNEMHGLAAISVLDNGSGIDIKECDQHFS RFNESSKQGDDDLQGAHGKGRLAFHLLCSNATWYTKCHDSESKIFIDSLTLRNFSAKEISPKEQHAPLSLFKSGTCVVLT NFHTNLPELDVIRKNLESYFGWRLILNPERKLTVNGVEVDIPESDLIKKNICINGAEFKIDFIRWIDKPGDEKSYNYVVN HDGRVLHRDLSSFNKKPNFHLSSYSRSDWFDNFDKSSSSLNFTDTPQVSPDSTEFKKLKKAIHDFSSDIYEEFLREFVEE KIEEYEARGYFPEHKSLKAEEAAWRRENTKSFVKSLYLADPTIFNNIKEKPVKILLALIDKILVSNENDTIFEIIGEILN LDENQINIFSRQIKNSSLKNIVSTIEVLQKRELAVHKLREIMVKHYREVLETPDLQGIIESNTWLFGNKYTMLGAEEDDF QKISLNLRKHVKGIDLIDEGDLESTDLEEELDIDGVRRQVDLFLARKNIGFNSRGESYYQCTIIEIKRPAIALNEKHLKQ IRDYARIISEHSGFSMEKMRFEIILVGRKISEKDFDIHSALETAVAKNCSGLIPSDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70848; Mature: 70717
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNMAISGTADITHEGIKKHFTKWKKYPFQSVIELIANGFDSGATSVDVTIEHNEMHGLA CCCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEE AISVLDNGSGIDIKECDQHFSRFNESSKQGDDDLQGAHGKGRLAFHLLCSNATWYTKCHD EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCEEEEEEECCCEEEEEECC SESKIFIDSLTLRNFSAKEISPKEQHAPLSLFKSGTCVVLTNFHTNLPELDVIRKNLESY CCCEEEEEEEEECCCCCCCCCCCHHCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH FGWRLILNPERKLTVNGVEVDIPESDLIKKNICINGAEFKIDFIRWIDKPGDEKSYNYVV CCEEEEECCCCEEEECCEEEECCCHHHHHHHHEECCCCEEEHHHHHCCCCCCCCCCCEEE NHDGRVLHRDLSSFNKKPNFHLSSYSRSDWFDNFDKSSSSLNFTDTPQVSPDSTEFKKLK CCCCHHHHHHHHHHCCCCCEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH KAIHDFSSDIYEEFLREFVEEKIEEYEARGYFPEHKSLKAEEAAWRRENTKSFVKSLYLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC DPTIFNNIKEKPVKILLALIDKILVSNENDTIFEIIGEILNLDENQINIFSRQIKNSSLK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCHHHH NIVSTIEVLQKRELAVHKLREIMVKHYREVLETPDLQGIIESNTWLFGNKYTMLGAEEDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEECCEEEEECCCCCC FQKISLNLRKHVKGIDLIDEGDLESTDLEEELDIDGVRRQVDLFLARKNIGFNSRGESYY HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEE QCTIIEIKRPAIALNEKHLKQIRDYARIISEHSGFSMEKMRFEIILVGRKISEKDFDIHS EEEEEEEECCCEECCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEEECCCCCCCCHHHH ALETAVAKNCSGLIPSDT HHHHHHHHCCCCCCCCCC >Mature Secondary Structure GNMAISGTADITHEGIKKHFTKWKKYPFQSVIELIANGFDSGATSVDVTIEHNEMHGLA CCCEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEE AISVLDNGSGIDIKECDQHFSRFNESSKQGDDDLQGAHGKGRLAFHLLCSNATWYTKCHD EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCEEEEEEECCCEEEEEECC SESKIFIDSLTLRNFSAKEISPKEQHAPLSLFKSGTCVVLTNFHTNLPELDVIRKNLESY CCCEEEEEEEEECCCCCCCCCCCHHCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH FGWRLILNPERKLTVNGVEVDIPESDLIKKNICINGAEFKIDFIRWIDKPGDEKSYNYVV CCEEEEECCCCEEEECCEEEECCCHHHHHHHHEECCCCEEEHHHHHCCCCCCCCCCCEEE NHDGRVLHRDLSSFNKKPNFHLSSYSRSDWFDNFDKSSSSLNFTDTPQVSPDSTEFKKLK CCCCHHHHHHHHHHCCCCCEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH KAIHDFSSDIYEEFLREFVEEKIEEYEARGYFPEHKSLKAEEAAWRRENTKSFVKSLYLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC DPTIFNNIKEKPVKILLALIDKILVSNENDTIFEIIGEILNLDENQINIFSRQIKNSSLK CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCHHHH NIVSTIEVLQKRELAVHKLREIMVKHYREVLETPDLQGIIESNTWLFGNKYTMLGAEEDD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEECCEEEEECCCCCC FQKISLNLRKHVKGIDLIDEGDLESTDLEEELDIDGVRRQVDLFLARKNIGFNSRGESYY HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEE QCTIIEIKRPAIALNEKHLKQIRDYARIISEHSGFSMEKMRFEIILVGRKISEKDFDIHS EEEEEEEECCCEECCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEEECCCCCCCCHHHH ALETAVAKNCSGLIPSDT HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA