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The map label for this gene is spr [H]

Identifier: 126176481

GI number: 126176481

Start: 5031322

End: 5031816

Strand: Reverse

Name: spr [H]

Synonym: Sbal_4296

Alternate gene names: 126176481

Gene position: 5031816-5031322 (Counterclockwise)

Preceding gene: 126176482

Following gene: 126176480

Centisome position: 98.14

GC content: 50.1

Gene sequence:

>495_bases
GTGAAATCTGCCTGCAATGAGTTTGAAGCTATGAAACGATTACTGATAATTATCTTAGCCTTAGGCCTTGGCGCTTGTGC
TAGCGCGCCAGAACCTAAGCCTGTGGTAAAGCAAGTTGAACCCGCCACGGTTTGGAACGATAGCAATATCTCCGAACTGC
ATTCTGAGTGGCGCGGTGTGCCCTATCGTTTAGGCGGTGGCACTAAGCGGGGCATAGATTGCTCGGCCTTTGTGTCGGTT
GCCTATCAGAAGATGTTGGGTATGACCTTGCCGCGCACGGTTGAAGAACAGCAAGCCCTAGGGAAACCCGTGCCGAGAAA
TCAACTGCGCAAGGGCGACTTGGTATTTTTCAAGACAGGTTGGAGCACGCACCATGTCGGCATTTATGTGGGAGACGATA
ATTTTCTCCATGTTTCCACTAGCCAAGGGGTGAAGATTTCGAGCCTGCATAACAGTTATTGGGCGTCTAAGTATTGGAAT
GCACGGCGAATTTAG

Upstream 100 bases:

>100_bases
GCTTTGGGTTACATTAGTCTGCTAGAGTGCGCGGGTGTTTGGGCGTTTTGATCCTCAGCCGCCCTGAATTTACCTGATAA
AAACTCAAAATTACGTTACT

Downstream 100 bases:

>100_bases
CACATCTTCTTTATGCACTTTCTTTTATGCACTTGGGCTGATGAGTTAGCGGAGACAATATGTCCTTAGAGCCTGCGTTA
TCCCAGAGTGACCCTTTACC

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKSACNEFEAMKRLLIIILALGLGACASAPEPKPVVKQVEPATVWNDSNISELHSEWRGVPYRLGGGTKRGIDCSAFVSV
AYQKMLGMTLPRTVEEQQALGKPVPRNQLRKGDLVFFKTGWSTHHVGIYVGDDNFLHVSTSQGVKISSLHNSYWASKYWN
ARRI

Sequences:

>Translated_164_residues
MKSACNEFEAMKRLLIIILALGLGACASAPEPKPVVKQVEPATVWNDSNISELHSEWRGVPYRLGGGTKRGIDCSAFVSV
AYQKMLGMTLPRTVEEQQALGKPVPRNQLRKGDLVFFKTGWSTHHVGIYVGDDNFLHVSTSQGVKISSLHNSYWASKYWN
ARRI
>Mature_164_residues
MKSACNEFEAMKRLLIIILALGLGACASAPEPKPVVKQVEPATVWNDSNISELHSEWRGVPYRLGGGTKRGIDCSAFVSV
AYQKMLGMTLPRTVEEQQALGKPVPRNQLRKGDLVFFKTGWSTHHVGIYVGDDNFLHVSTSQGVKISSLHNSYWASKYWN
ARRI

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=165, Percent_Identity=43.030303030303, Blast_Score=140, Evalue=5e-35,
Organism=Escherichia coli, GI1788001, Length=142, Percent_Identity=41.5492957746479, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1787944, Length=112, Percent_Identity=41.9642857142857, Blast_Score=90, Evalue=9e-20,
Organism=Escherichia coli, GI1786421, Length=113, Percent_Identity=38.9380530973451, Blast_Score=73, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 18245; Mature: 18245

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSACNEFEAMKRLLIIILALGLGACASAPEPKPVVKQVEPATVWNDSNISELHSEWRGV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHCCC
PYRLGGGTKRGIDCSAFVSVAYQKMLGMTLPRTVEEQQALGKPVPRNQLRKGDLVFFKTG
CEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHCCCCCEEEEEEC
WSTHHVGIYVGDDNFLHVSTSQGVKISSLHNSYWASKYWNARRI
CCEEEEEEEECCCCEEEEECCCCEEEEHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKSACNEFEAMKRLLIIILALGLGACASAPEPKPVVKQVEPATVWNDSNISELHSEWRGV
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHCCC
PYRLGGGTKRGIDCSAFVSVAYQKMLGMTLPRTVEEQQALGKPVPRNQLRKGDLVFFKTG
CEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHCCCCCEEEEEEC
WSTHHVGIYVGDDNFLHVSTSQGVKISSLHNSYWASKYWNARRI
CCEEEEEEEECCCCEEEEECCCCEEEEHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]