| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176457
Identifier: 126176457
GI number: 126176457
Start: 4998655
End: 4999065
Strand: Reverse
Name: 126176457
Synonym: Sbal_4272
Alternate gene names: NA
Gene position: 4999065-4998655 (Counterclockwise)
Preceding gene: 126176458
Following gene: 126176456
Centisome position: 97.5
GC content: 48.18
Gene sequence:
>411_bases ATGTCAGTTACCGAATACAGCCTCGAAATCCACCCAAGATTCACAGAAACCGATGGTCTAGGCCATATCAACAACACAGT GATCCCCGTATGGTGCGAAGCAGCGCGCACGCCAATTTTCGAGATTTTTAATCCAGAGTTGGATTTGCAGCAATGGAACT TAATTGTCGCGGGCTTTACCGTGGCGTTTATCGCGCCAACCTATTACGGCAAAAGCGTGACAGTGAAAACCTTTGTCAGC CGCATCGGCAACAGCAGTTTCGAACTGACTCAAACCTGTTGGCAAGCCGGCAATAAAACCGCTGAAGTGAAAACTACACT GGTACATTACGACTACAGCTGCGAAAAAAGTCGCCCTATCCCTGAAGATATCCGCGAAATGCTCGCCAAGCTGAATGGTG AAAGCGTCTAA
Upstream 100 bases:
>100_bases TGGTAGGCTTGGGATAAAGGATGAATTTGGTGCGGGTAGCTTAATCGCGATAATCATTAAATTCATCAGCTTACAGAATA ACAATAAAAGGGAAGTCCGA
Downstream 100 bases:
>100_bases TCTGCCCTGTCTCTCGGTCAGCGCAATTGCAATTGCGCTGCTGAAGCGTTAATTTGTCGACCCGCTAACTGTGATGCAGA TCACTTACCTGTATCGCCTA
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Thioesterase; Thioesterase Superfamily; Thioesterase FcbC; 4-Hydroxybenzoyl-CoA Thioesterase
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSVTEYSLEIHPRFTETDGLGHINNTVIPVWCEAARTPIFEIFNPELDLQQWNLIVAGFTVAFIAPTYYGKSVTVKTFVS RIGNSSFELTQTCWQAGNKTAEVKTTLVHYDYSCEKSRPIPEDIREMLAKLNGESV
Sequences:
>Translated_136_residues MSVTEYSLEIHPRFTETDGLGHINNTVIPVWCEAARTPIFEIFNPELDLQQWNLIVAGFTVAFIAPTYYGKSVTVKTFVS RIGNSSFELTQTCWQAGNKTAEVKTTLVHYDYSCEKSRPIPEDIREMLAKLNGESV >Mature_135_residues SVTEYSLEIHPRFTETDGLGHINNTVIPVWCEAARTPIFEIFNPELDLQQWNLIVAGFTVAFIAPTYYGKSVTVKTFVSR IGNSSFELTQTCWQAGNKTAEVKTTLVHYDYSCEKSRPIPEDIREMLAKLNGESV
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15365; Mature: 15233
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTEYSLEIHPRFTETDGLGHINNTVIPVWCEAARTPIFEIFNPELDLQQWNLIVAGFT CCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCHHHCEEEEEHHH VAFIAPTYYGKSVTVKTFVSRIGNSSFELTQTCWQAGNKTAEVKTTLVHYDYSCEKSRPI EEHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCC PEDIREMLAKLNGESV CHHHHHHHHHCCCCCC >Mature Secondary Structure SVTEYSLEIHPRFTETDGLGHINNTVIPVWCEAARTPIFEIFNPELDLQQWNLIVAGFT CCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCCHHHCEEEEEHHH VAFIAPTYYGKSVTVKTFVSRIGNSSFELTQTCWQAGNKTAEVKTTLVHYDYSCEKSRPI EEHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCC PEDIREMLAKLNGESV CHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA