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The map label for this gene is paiB [H]

Identifier: 126176444

GI number: 126176444

Start: 4987613

End: 4988230

Strand: Direct

Name: paiB [H]

Synonym: Sbal_4259

Alternate gene names: 126176444

Gene position: 4987613-4988230 (Clockwise)

Preceding gene: 126176443

Following gene: 126176445

Centisome position: 97.27

GC content: 46.28

Gene sequence:

>618_bases
ATGTATACCCCTAAGAACATGGCGATGACAGATCAGCAGGCCATCACAGCTTTTATCACGCAAAACAGCTTTGGTTTACT
GGTTTCGAGCTCACTTAATGCGACCCATATTCCCTTTGTACTCGATGTAACAGTGGGAGAGAAAGGCGTCTTGTATGGCC
ATGTTTCGCGAGCAAACGCACATTGGCAAGAGCTTGAAAGTCAGCGGGTATTAGTGGTTTTCAGCGGCGCACACGCTTAC
ATTTCCCCAACTTGGTATGATGCTAAACCTGCGGTGCCTACATGGAATTATGCGGCGGTGCATTGTTATGGTGTCGCAAG
CCTGCTGAATGATACCGAAACTCAAGACATGTTGGACAAGCTAGTCACAAAGTACGAACCCAAGCTATTGCAAGATAAAC
AAATTATGCCAGATGAGTATCAGCAGAAACTGCGCCAAGCTATAGTCGGCTTTAAAATTGTGATTGATGAGATTCAAGCA
AAAGAAAAGCTCGGCCAGCATAGATCCATTAGCGATCAACAGGGTGTGTTCAACGGCTTAAGTGCCAGCCCCCATGCCGA
TGCAGCGCAATTAGCCCACTATATGAATCAACGAGATATTGGCAAAGGTAATGGCTGA

Upstream 100 bases:

>100_bases
AGCTCACTTCTGCCTGTGCTCTACTTACAAATCCACTCGACACCATTCTAATGCGTTTTCAACCACTGTTTACGACAGAA
TTTGAAACCCAAGGATGACA

Downstream 100 bases:

>100_bases
GCCCATGCAGCTAAGTCAATACTTTGATTAGCCACTCACAGTCGCGCAGCACTGTTAATCATTGTCGAATGTAATCATGT
ACCCATAGGTCTTCTGAAAA

Product: FMN-binding negative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MYTPKNMAMTDQQAITAFITQNSFGLLVSSSLNATHIPFVLDVTVGEKGVLYGHVSRANAHWQELESQRVLVVFSGAHAY
ISPTWYDAKPAVPTWNYAAVHCYGVASLLNDTETQDMLDKLVTKYEPKLLQDKQIMPDEYQQKLRQAIVGFKIVIDEIQA
KEKLGQHRSISDQQGVFNGLSASPHADAAQLAHYMNQRDIGKGNG

Sequences:

>Translated_205_residues
MYTPKNMAMTDQQAITAFITQNSFGLLVSSSLNATHIPFVLDVTVGEKGVLYGHVSRANAHWQELESQRVLVVFSGAHAY
ISPTWYDAKPAVPTWNYAAVHCYGVASLLNDTETQDMLDKLVTKYEPKLLQDKQIMPDEYQQKLRQAIVGFKIVIDEIQA
KEKLGQHRSISDQQGVFNGLSASPHADAAQLAHYMNQRDIGKGNG
>Mature_205_residues
MYTPKNMAMTDQQAITAFITQNSFGLLVSSSLNATHIPFVLDVTVGEKGVLYGHVSRANAHWQELESQRVLVVFSGAHAY
ISPTWYDAKPAVPTWNYAAVHCYGVASLLNDTETQDMLDKLVTKYEPKLLQDKQIMPDEYQQKLRQAIVGFKIVIDEIQA
KEKLGQHRSISDQQGVFNGLSASPHADAAQLAHYMNQRDIGKGNG

Specific function: Involved in the reduction of extracellular and cell- associated protease levels, as well as in the reduced levels of alpha-amylase, levansucrase, alkaline phosphatase and sporulation inhibition, when present in high copy number [H]

COG id: COG2808

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the paiB family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322780, Length=122, Percent_Identity=36.8852459016393, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007396
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF04299 FMN_bind_2 [H]

EC number: NA

Molecular weight: Translated: 22793; Mature: 22793

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTPKNMAMTDQQAITAFITQNSFGLLVSSSLNATHIPFVLDVTVGEKGVLYGHVSRANA
CCCCCCCCCCHHHHHEEEEECCCCCEEEECCCCCEECCEEEEEEECCCCEEEEECCCCCH
HWQELESQRVLVVFSGAHAYISPTWYDAKPAVPTWNYAAVHCYGVASLLNDTETQDMLDK
HHHHHCCCEEEEEEECCCEEECCCEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
LVTKYEPKLLQDKQIMPDEYQQKLRQAIVGFKIVIDEIQAKEKLGQHRSISDQQGVFNGL
HHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
SASPHADAAQLAHYMNQRDIGKGNG
CCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYTPKNMAMTDQQAITAFITQNSFGLLVSSSLNATHIPFVLDVTVGEKGVLYGHVSRANA
CCCCCCCCCCHHHHHEEEEECCCCCEEEECCCCCEECCEEEEEEECCCCEEEEECCCCCH
HWQELESQRVLVVFSGAHAYISPTWYDAKPAVPTWNYAAVHCYGVASLLNDTETQDMLDK
HHHHHCCCEEEEEEECCCEEECCCEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
LVTKYEPKLLQDKQIMPDEYQQKLRQAIVGFKIVIDEIQAKEKLGQHRSISDQQGVFNGL
HHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC
SASPHADAAQLAHYMNQRDIGKGNG
CCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2108124; 9384377 [H]