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The map label for this gene is viuB [H]

Identifier: 126176440

GI number: 126176440

Start: 4982579

End: 4983331

Strand: Reverse

Name: viuB [H]

Synonym: Sbal_4255

Alternate gene names: 126176440

Gene position: 4983331-4982579 (Counterclockwise)

Preceding gene: 126176441

Following gene: 126176438

Centisome position: 97.19

GC content: 48.87

Gene sequence:

>753_bases
ATGAATAAACCTGCACCACGTGAGTTGGCAGTGATCCGCTCGACTTATATCACCCCGCATATGTTACGCATGACCTTAGG
CGGTGCGGGATTCGCTGGTTTTCCTATTGATCAAGAGAGTGCCTATATCAAGTTGTTATTCCCACAAGCGGGTGAACGTC
CCTTAATGCGAACCTACACCATTCGCCAGCAACGTGCTGATGAAATTGATGTGGATTTTGTACTGCACGATACCGACGGC
CCCGCATCGAGCTGGGCGAAAACGGCGCAGGTAGGCGATATCATTCAAATTGGCGGACCCGGGCTTAAAAAACTGATCAA
CTTTGAGGCGGATTGGTTTTTACTTGCAGGTGATATGACAGCCTTGCCCGCTATCAGCGTGAATCTGGCACAATTACCAA
ACAATGCCGTGGGTTACGCTGTGATTGAAGTATTGAGCGAAGCCGACATTCAGTCTCTGGTGCATCCCGAAAATGTTGAG
CTGCATTGGGTGATTAATCCTGAGGCCGATCCCGAAGGTCGCCCTTTGGTTGAGCGGATTGCCCAATTACCTTGGCTTAC
TGGCGAGCTCGCAGTGTGGATTGCCTGTGAATTCAATAGTATGCGCGCGCTAAGACGACACTTCAAGCAAGCGCATTCAC
TGCCCAAGAGCCATTTTTATACCTCGAGCTATTGGAAAATTGGTTGTAATGAGGGCGAGCATAAGCTGGTAAAACAAGAG
GATGAACAGTTAGAAAATGGTGCCAGTGTTTAA

Upstream 100 bases:

>100_bases
CATGCTCAAAAAAGACCATTCAGTAAGCCAAAAGACCCGATTGGCAAAGGAGCCGTTGAGGCGCGCTTAATGGAAGCAAA
CGCCATAGGAGAAAATCATA

Downstream 100 bases:

>100_bases
ATCCAGATAAGGTCGCATCTTTGATTTAGCGACCTTATCTAGCTAGCTAGCCTAGCGTGCTGCTTATCCTGCATTTGTGG
CGAGTACGCTCATTTTACTG

Product: siderophore-interacting protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MNKPAPRELAVIRSTYITPHMLRMTLGGAGFAGFPIDQESAYIKLLFPQAGERPLMRTYTIRQQRADEIDVDFVLHDTDG
PASSWAKTAQVGDIIQIGGPGLKKLINFEADWFLLAGDMTALPAISVNLAQLPNNAVGYAVIEVLSEADIQSLVHPENVE
LHWVINPEADPEGRPLVERIAQLPWLTGELAVWIACEFNSMRALRRHFKQAHSLPKSHFYTSSYWKIGCNEGEHKLVKQE
DEQLENGASV

Sequences:

>Translated_250_residues
MNKPAPRELAVIRSTYITPHMLRMTLGGAGFAGFPIDQESAYIKLLFPQAGERPLMRTYTIRQQRADEIDVDFVLHDTDG
PASSWAKTAQVGDIIQIGGPGLKKLINFEADWFLLAGDMTALPAISVNLAQLPNNAVGYAVIEVLSEADIQSLVHPENVE
LHWVINPEADPEGRPLVERIAQLPWLTGELAVWIACEFNSMRALRRHFKQAHSLPKSHFYTSSYWKIGCNEGEHKLVKQE
DEQLENGASV
>Mature_250_residues
MNKPAPRELAVIRSTYITPHMLRMTLGGAGFAGFPIDQESAYIKLLFPQAGERPLMRTYTIRQQRADEIDVDFVLHDTDG
PASSWAKTAQVGDIIQIGGPGLKKLINFEADWFLLAGDMTALPAISVNLAQLPNNAVGYAVIEVLSEADIQSLVHPENVE
LHWVINPEADPEGRPLVERIAQLPWLTGELAVWIACEFNSMRALRRHFKQAHSLPKSHFYTSSYWKIGCNEGEHKLVKQE
DEQLENGASV

Specific function: Involved in intracellular removal of iron from iron- vibriobactin complex. Vibriobactin is an iron-chelating compound involved in the transport of iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=241, Percent_Identity=27.3858921161826, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 27882; Mature: 27882

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPAPRELAVIRSTYITPHMLRMTLGGAGFAGFPIDQESAYIKLLFPQAGERPLMRTYT
CCCCCCHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHH
IRQQRADEIDVDFVLHDTDGPASSWAKTAQVGDIIQIGGPGLKKLINFEADWFLLAGDMT
HHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHCCCCCEEEEECCCC
ALPAISVNLAQLPNNAVGYAVIEVLSEADIQSLVHPENVELHWVINPEADPEGRPLVERI
CCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHH
AQLPWLTGELAVWIACEFNSMRALRRHFKQAHSLPKSHFYTSSYWKIGCNEGEHKLVKQE
HHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCCHHHHHHH
DEQLENGASV
HHHHHCCCCC
>Mature Secondary Structure
MNKPAPRELAVIRSTYITPHMLRMTLGGAGFAGFPIDQESAYIKLLFPQAGERPLMRTYT
CCCCCCHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHH
IRQQRADEIDVDFVLHDTDGPASSWAKTAQVGDIIQIGGPGLKKLINFEADWFLLAGDMT
HHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEECCCHHHHHHCCCCCEEEEECCCC
ALPAISVNLAQLPNNAVGYAVIEVLSEADIQSLVHPENVELHWVINPEADPEGRPLVERI
CCCEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHH
AQLPWLTGELAVWIACEFNSMRALRRHFKQAHSLPKSHFYTSSYWKIGCNEGEHKLVKQE
HHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCCCCHHHHHHH
DEQLENGASV
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083157 [H]