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The map label for this gene is yidL [C]

Identifier: 126176431

GI number: 126176431

Start: 4972952

End: 4973773

Strand: Direct

Name: yidL [C]

Synonym: Sbal_4246

Alternate gene names: 126176431

Gene position: 4972952-4973773 (Clockwise)

Preceding gene: 126176430

Following gene: 126176439

Centisome position: 96.99

GC content: 38.81

Gene sequence:

>822_bases
ATGAGCACCTTGAAGTACTCTTTTTTTAAAGTAAACCCTATATTTCCTGAGGTCATGACCTCCCAGGGACATAAACTCTC
CCATGAATGCTCGCCACACTTTCATCTCGATTATGATTTCACCTTAGTCACATCGGGAATATTAGAATTAAAAGTCGGCA
ATAAAACACTATTCTATAGTCCTAATCAAATAAGTATCATCAACCCTGGTTATGTGCATTATGGTAAAGGCGTGGGGAAA
GAGAGCCTTTCCACCAGAAACGTCAGAATAAGCCAGAGATTTGTCCATCAGATAGCGAGAGCGAACCATCCCGACTTCGA
GTTTCCTCTTTTATTTTCTGAATCACCCATTTTTAGCACTGCAATGGTGACTTTATTTGAAACTTACTTCGACTTGTCGA
GGAGTGATGATAGCCATCCCCAGGAAGTGTCAGAAATGGGTTGGAAACTATTCAACTCACTAATCGACCTATCCAGTGAG
GGAAAACCTAATCACTCAGATGACAGAAGGAGACTCAGTAAAAGCATAGAAATAATGGATAGCGATATAGGGACAAAATT
GACAGTGGCAGACATAGCGAAAGCCGTTAATTTGTCAGAATATCATTTCATCAAAAAATTCAAGCAGATTTTTGGTTTGA
CCCCCTATAGCTATTTTATGCAAATGAAATTAGAAAAAGCTTTCAACGAACTGATCAAAGGAGAAAAAGTGAGCGATATT
GCTGTTAAATACAACTACTCAGACCAGGCTCACTTAAGTCGCCTTATAAAAAAACACTATGGCTATACTCCAGTTAAGGT
GAAATCAATCAGCCATAAATGA

Upstream 100 bases:

>100_bases
AGAATATATTGGCTTATGTGGTAGGTCTAACGATGAAAGTGTCTTGGCATTACTGAAAAAGCTATCCCTGTATCGATAAA
TAGGTTATTTGGAGTAGGTA

Downstream 100 bases:

>100_bases
AAAGCCTAATATTATTCCACTCAGTTTATTTGATATTAGAAAATAAAGTTAACTAATGTCAAATGAACGGCCAAACCAAT
ACCTATCGACGCCAGTGCAT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; AraC/XylS Family Transcriptional Regulator; Transcriptional Regulator; AraC/XylS Family Transcription Factor; Transcription Regulator Protein; L-Rhamnose Operon Transcriptional Activator RhaR; HTH-Type Transcriptional Activator RhaS; AraC Family Regulatory Helix-Turn-Helix Protein; Transcriptional Regulator AraC/XylS Family; Helix-Turn-Helix Domain-Containing Protein; AraC Family Transcription Regulator; Transcriptional Regulator AraC-Family; AraC Type Helix-Turn-Helix- Domain-Containing Protein; Transcriptional Regulator Protein AraC Family; Transcriptional Regulator Protein; Transcription Regulator; Arac Family Transcriptional Regulator Protein Arac Family

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSTLKYSFFKVNPIFPEVMTSQGHKLSHECSPHFHLDYDFTLVTSGILELKVGNKTLFYSPNQISIINPGYVHYGKGVGK
ESLSTRNVRISQRFVHQIARANHPDFEFPLLFSESPIFSTAMVTLFETYFDLSRSDDSHPQEVSEMGWKLFNSLIDLSSE
GKPNHSDDRRRLSKSIEIMDSDIGTKLTVADIAKAVNLSEYHFIKKFKQIFGLTPYSYFMQMKLEKAFNELIKGEKVSDI
AVKYNYSDQAHLSRLIKKHYGYTPVKVKSISHK

Sequences:

>Translated_273_residues
MSTLKYSFFKVNPIFPEVMTSQGHKLSHECSPHFHLDYDFTLVTSGILELKVGNKTLFYSPNQISIINPGYVHYGKGVGK
ESLSTRNVRISQRFVHQIARANHPDFEFPLLFSESPIFSTAMVTLFETYFDLSRSDDSHPQEVSEMGWKLFNSLIDLSSE
GKPNHSDDRRRLSKSIEIMDSDIGTKLTVADIAKAVNLSEYHFIKKFKQIFGLTPYSYFMQMKLEKAFNELIKGEKVSDI
AVKYNYSDQAHLSRLIKKHYGYTPVKVKSISHK
>Mature_272_residues
STLKYSFFKVNPIFPEVMTSQGHKLSHECSPHFHLDYDFTLVTSGILELKVGNKTLFYSPNQISIINPGYVHYGKGVGKE
SLSTRNVRISQRFVHQIARANHPDFEFPLLFSESPIFSTAMVTLFETYFDLSRSDDSHPQEVSEMGWKLFNSLIDLSSEG
KPNHSDDRRRLSKSIEIMDSDIGTKLTVADIAKAVNLSEYHFIKKFKQIFGLTPYSYFMQMKLEKAFNELIKGEKVSDIA
VKYNYSDQAHLSRLIKKHYGYTPVKVKSISHK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31351; Mature: 31220

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLKYSFFKVNPIFPEVMTSQGHKLSHECSPHFHLDYDFTLVTSGILELKVGNKTLFYS
CCCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCEEECCCHHEEECCEEEEEECCEEEEEC
PNQISIINPGYVHYGKGVGKESLSTRNVRISQRFVHQIARANHPDFEFPLLFSESPIFST
CCEEEEECCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHH
AMVTLFETYFDLSRSDDSHPQEVSEMGWKLFNSLIDLSSEGKPNHSDDRRRLSKSIEIMD
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
SDIGTKLTVADIAKAVNLSEYHFIKKFKQIFGLTPYSYFMQMKLEKAFNELIKGEKVSDI
CCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
AVKYNYSDQAHLSRLIKKHYGYTPVKVKSISHK
EEEECCCCHHHHHHHHHHHCCCCCEEEECCCCC
>Mature Secondary Structure 
STLKYSFFKVNPIFPEVMTSQGHKLSHECSPHFHLDYDFTLVTSGILELKVGNKTLFYS
CCCEEEEEEECCCCHHHHHCCCCCCCCCCCCCEEECCCHHEEECCEEEEEECCEEEEEC
PNQISIINPGYVHYGKGVGKESLSTRNVRISQRFVHQIARANHPDFEFPLLFSESPIFST
CCEEEEECCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHH
AMVTLFETYFDLSRSDDSHPQEVSEMGWKLFNSLIDLSSEGKPNHSDDRRRLSKSIEIMD
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
SDIGTKLTVADIAKAVNLSEYHFIKKFKQIFGLTPYSYFMQMKLEKAFNELIKGEKVSDI
CCCCCEEEHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
AVKYNYSDQAHLSRLIKKHYGYTPVKVKSISHK
EEEECCCCHHHHHHHHHHHCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA