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The map label for this gene is ptrB [H]

Identifier: 126176403

GI number: 126176403

Start: 4942012

End: 4944147

Strand: Reverse

Name: ptrB [H]

Synonym: Sbal_4218

Alternate gene names: 126176403

Gene position: 4944147-4942012 (Counterclockwise)

Preceding gene: 126176407

Following gene: 126176402

Centisome position: 96.43

GC content: 47.43

Gene sequence:

>2136_bases
ATGCGATCTCTGCTGCTAACTTTAGGTATTGCCATGTTGTTATCCGGTTGTTCGACCTCAAAAGGGCAAGTACCCGCCCC
AGTTGCTGAAAAAATTCCCCATGTGATGACCTTGCATGGCGTAACGCGCACCGATGATTACTATTGGCTGCGTGACGATG
AACGCAAAGATCCTAAAGTGTTGGCCCATCTCGAAGCCGAGAATCGCTACACTGCGGCTTATTTCAAACCCTTAAAGCCG
CTGCAAGATGGCCTTTTTAAAGAATTAACTGAGCGCTTAGTCGCCGATGAGTCAAGTGTGCCGTATCAATGGCACCAGCA
CAGTTATTACAGTCGTTATAAAGAAGGCGGCGAATATCCGTTAATCAGCCGTAAAGGCGCCGATGGCGTTGAGCAAGTGA
TGCTGGATGTTAACGAGCGAGCTAAGGGCCATGAGTTTTATGGCTTAGGCGGCGCCAGTGTTAGCCCAGATGAAACCATG
TTGGCCTTTGGTGAAGACGTCCTCAGCCGCCGTGTGTACCACATTTATTTTAAAGATTTGGCCTCGGGCGACATGATCGT
CGACGTGCTTGAAAACACCGAAGGTCGAGTGGTGTGGGCGAACGATAACAAACATGTGTTCTATATCGCCAAAGATTTGC
AGACCTTACTTGGCTACCAAGTATATCGCCATGAGCTGGGCACTAAGCAATCTAGCGACGTGTTAGTGTATGAAGAACAA
GACGATTCTTTTTATATCTCGCTCGGCAAAACCTTAGATGAGTCGCAAATTGTGTTGTTCCAAGAGAGCACCACAACGAG
CGAGGTGTCAGTGCTCGATGCCAGCGAACCTTTGGGTTTATTCAAGCCAGTGTTAGCGAGGGAGGAAGGCCACGAATATA
GCGTGTCTAAGTTGGGCGATACTTATTACATTCTCACCAACTGGCAGGCGACTAACTTCCGTTTGATGAAGGTCGCCATC
AAAGATGCGGCGGACAAATCTAAGTGGCAAGAGGTGGTTGCGCATAATCCCAATGCCCGTATCGAAGATGAGTTAGTGCT
CAAGGATTATCTGATTATTCAGACCCGCGAAAACGGCCTGACGCGAATTAAAGTGATGCCGTTCAATGGTCAAAAGCCCT
TTGAGTTGAGCTTTGATGAACCTGCCTATGTGATGGGTTTAGATGTTAATTCTCAGCAAGACAGCAATAAGTTACGCATT
TTCTACTCCAGCCTGACAACGCCAGAAGCCGTATACGAATATTCGCTAGTGAATCCCGATAGACGGGATTTATTGAAACA
AGATCAAGTCTTAGGCGGCTTCGATGCCAGCCAATATCGTGCCGAACGTGTGTTTATTACCGCCCGTGATGGTGTGAAAG
TGCCCGTTTCTTTGGTGTATCGTAAAGATAAATTCAAGAAAGATGGTACTAACCCTCTGTATCAATACGGTTATGGATCT
TACGGTTACACAGTTGAACCCGATTTTTCATCATCTGTTATCAGTCTGCTCGATCGTGGCTTTGTGTATGCCATCGCCCA
TGTGCGCGGTTCAGAAATGCTCGGCCGCCCTTGGTATGACGACGGTAAGCTGTTGAATAAACAAAACACCTTCAATGATT
TTATCGATGTAACAACAGCATTAACGGCACAAGGTTATGGCGATAAAAACAAGGTTGTCGCCTCTGGCGGCAGTGCGGGC
GGTTTGCTAATGGGCGCAATTGCTAACCAAGCGCCGGATAAGTACTTTGCCATCGCCGCCCATGTACCTTTTGTTGATGT
GGTGACGACTATGCTGGACGAGTCGATTCCATTGACGACCAATGAGTACGACGAGTGGGGCAATCCGAACGAGAAAACCT
ATTTCGATTACATGCTGAGTTACTCACCCTACGACAATGTCACCGAGCAAGAATACCCACACATGTTAGTGACGACGGGT
TTGCATGACTCACAAGTGCAGTATTTTGAACCCGCCAAGTGGGTCGCTAAGCTGCGCGATGTTAAAAACCAATGGTACAA
GAGTGACGATAAAGTATTGTTACTTAACGTGGATATGGAAGCCGGCCATGGTGGTAAGAGTGGTCGTTATCGCCAATACC
AAGACACAGCCCAAGAATATGCGTTCTTCTTGAGTCTGTTAGGTATGGCGAAGTAG

Upstream 100 bases:

>100_bases
TAGGCGCTCTGAAACTCGTATCTTCAGGTAGCTTGGGTATAATTATTGACTTGCCGTTGCATTCTGCGACGGTCGTTATG
GACGTCACAAGGACGTATAA

Downstream 100 bases:

>100_bases
GTCATTCGTAAGTGACCGAATCAGCCGTCAGCCTAGGCAATACGGACATAGGCGCTTTACAGCAACATGAGTCACTGGGG
GCAGACACACTTGCCCCAGT

Product: oligopeptidase B

Products: NA

Alternate protein names: Oligopeptidase B; Protease II [H]

Number of amino acids: Translated: 711; Mature: 711

Protein sequence:

>711_residues
MRSLLLTLGIAMLLSGCSTSKGQVPAPVAEKIPHVMTLHGVTRTDDYYWLRDDERKDPKVLAHLEAENRYTAAYFKPLKP
LQDGLFKELTERLVADESSVPYQWHQHSYYSRYKEGGEYPLISRKGADGVEQVMLDVNERAKGHEFYGLGGASVSPDETM
LAFGEDVLSRRVYHIYFKDLASGDMIVDVLENTEGRVVWANDNKHVFYIAKDLQTLLGYQVYRHELGTKQSSDVLVYEEQ
DDSFYISLGKTLDESQIVLFQESTTTSEVSVLDASEPLGLFKPVLAREEGHEYSVSKLGDTYYILTNWQATNFRLMKVAI
KDAADKSKWQEVVAHNPNARIEDELVLKDYLIIQTRENGLTRIKVMPFNGQKPFELSFDEPAYVMGLDVNSQQDSNKLRI
FYSSLTTPEAVYEYSLVNPDRRDLLKQDQVLGGFDASQYRAERVFITARDGVKVPVSLVYRKDKFKKDGTNPLYQYGYGS
YGYTVEPDFSSSVISLLDRGFVYAIAHVRGSEMLGRPWYDDGKLLNKQNTFNDFIDVTTALTAQGYGDKNKVVASGGSAG
GLLMGAIANQAPDKYFAIAAHVPFVDVVTTMLDESIPLTTNEYDEWGNPNEKTYFDYMLSYSPYDNVTEQEYPHMLVTTG
LHDSQVQYFEPAKWVAKLRDVKNQWYKSDDKVLLLNVDMEAGHGGKSGRYRQYQDTAQEYAFFLSLLGMAK

Sequences:

>Translated_711_residues
MRSLLLTLGIAMLLSGCSTSKGQVPAPVAEKIPHVMTLHGVTRTDDYYWLRDDERKDPKVLAHLEAENRYTAAYFKPLKP
LQDGLFKELTERLVADESSVPYQWHQHSYYSRYKEGGEYPLISRKGADGVEQVMLDVNERAKGHEFYGLGGASVSPDETM
LAFGEDVLSRRVYHIYFKDLASGDMIVDVLENTEGRVVWANDNKHVFYIAKDLQTLLGYQVYRHELGTKQSSDVLVYEEQ
DDSFYISLGKTLDESQIVLFQESTTTSEVSVLDASEPLGLFKPVLAREEGHEYSVSKLGDTYYILTNWQATNFRLMKVAI
KDAADKSKWQEVVAHNPNARIEDELVLKDYLIIQTRENGLTRIKVMPFNGQKPFELSFDEPAYVMGLDVNSQQDSNKLRI
FYSSLTTPEAVYEYSLVNPDRRDLLKQDQVLGGFDASQYRAERVFITARDGVKVPVSLVYRKDKFKKDGTNPLYQYGYGS
YGYTVEPDFSSSVISLLDRGFVYAIAHVRGSEMLGRPWYDDGKLLNKQNTFNDFIDVTTALTAQGYGDKNKVVASGGSAG
GLLMGAIANQAPDKYFAIAAHVPFVDVVTTMLDESIPLTTNEYDEWGNPNEKTYFDYMLSYSPYDNVTEQEYPHMLVTTG
LHDSQVQYFEPAKWVAKLRDVKNQWYKSDDKVLLLNVDMEAGHGGKSGRYRQYQDTAQEYAFFLSLLGMAK
>Mature_711_residues
MRSLLLTLGIAMLLSGCSTSKGQVPAPVAEKIPHVMTLHGVTRTDDYYWLRDDERKDPKVLAHLEAENRYTAAYFKPLKP
LQDGLFKELTERLVADESSVPYQWHQHSYYSRYKEGGEYPLISRKGADGVEQVMLDVNERAKGHEFYGLGGASVSPDETM
LAFGEDVLSRRVYHIYFKDLASGDMIVDVLENTEGRVVWANDNKHVFYIAKDLQTLLGYQVYRHELGTKQSSDVLVYEEQ
DDSFYISLGKTLDESQIVLFQESTTTSEVSVLDASEPLGLFKPVLAREEGHEYSVSKLGDTYYILTNWQATNFRLMKVAI
KDAADKSKWQEVVAHNPNARIEDELVLKDYLIIQTRENGLTRIKVMPFNGQKPFELSFDEPAYVMGLDVNSQQDSNKLRI
FYSSLTTPEAVYEYSLVNPDRRDLLKQDQVLGGFDASQYRAERVFITARDGVKVPVSLVYRKDKFKKDGTNPLYQYGYGS
YGYTVEPDFSSSVISLLDRGFVYAIAHVRGSEMLGRPWYDDGKLLNKQNTFNDFIDVTTALTAQGYGDKNKVVASGGSAG
GLLMGAIANQAPDKYFAIAAHVPFVDVVTTMLDESIPLTTNEYDEWGNPNEKTYFDYMLSYSPYDNVTEQEYPHMLVTTG
LHDSQVQYFEPAKWVAKLRDVKNQWYKSDDKVLLLNVDMEAGHGGKSGRYRQYQDTAQEYAFFLSLLGMAK

Specific function: Cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues [H]

COG id: COG1770

COG function: function code E; Protease II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9A family [H]

Homologues:

Organism=Homo sapiens, GI41349456, Length=710, Percent_Identity=26.6197183098592, Blast_Score=220, Evalue=3e-57,
Organism=Homo sapiens, GI284172438, Length=469, Percent_Identity=27.5053304904051, Blast_Score=164, Evalue=3e-40,
Organism=Homo sapiens, GI284172431, Length=469, Percent_Identity=27.5053304904051, Blast_Score=164, Evalue=3e-40,
Organism=Homo sapiens, GI284172420, Length=469, Percent_Identity=27.5053304904051, Blast_Score=163, Evalue=4e-40,
Organism=Homo sapiens, GI284172413, Length=469, Percent_Identity=27.5053304904051, Blast_Score=163, Evalue=4e-40,
Organism=Homo sapiens, GI70778815, Length=469, Percent_Identity=27.5053304904051, Blast_Score=163, Evalue=4e-40,
Organism=Homo sapiens, GI108860686, Length=285, Percent_Identity=28.4210526315789, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI108860692, Length=215, Percent_Identity=33.0232558139535, Blast_Score=122, Evalue=1e-27,
Organism=Escherichia coli, GI1788150, Length=688, Percent_Identity=48.4011627906977, Blast_Score=652, Evalue=0.0,
Organism=Drosophila melanogaster, GI24583414, Length=731, Percent_Identity=25.5813953488372, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI221510989, Length=692, Percent_Identity=25.1445086705202, Blast_Score=173, Evalue=5e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002471
- InterPro:   IPR001375
- InterPro:   IPR002470
- InterPro:   IPR004106 [H]

Pfam domain/function: PF00326 Peptidase_S9; PF02897 Peptidase_S9_N [H]

EC number: =3.4.21.83 [H]

Molecular weight: Translated: 80659; Mature: 80659

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLLLTLGIAMLLSGCSTSKGQVPAPVAEKIPHVMTLHGVTRTDDYYWLRDDERKDPKV
CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEEECCCEECCCEEEECCCCCCCCCE
LAHLEAENRYTAAYFKPLKPLQDGLFKELTERLVADESSVPYQWHQHSYYSRYKEGGEYP
EEEEECCCCEEEEHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC
LISRKGADGVEQVMLDVNERAKGHEFYGLGGASVSPDETMLAFGEDVLSRRVYHIYFKDL
EEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEEECC
ASGDMIVDVLENTEGRVVWANDNKHVFYIAKDLQTLLGYQVYRHELGTKQSSDVLVYEEQ
CCCCEEEEEECCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
DDSFYISLGKTLDESQIVLFQESTTTSEVSVLDASEPLGLFKPVLAREEGHEYSVSKLGD
CCEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEHHHCCC
TYYILTNWQATNFRLMKVAIKDAADKSKWQEVVAHNPNARIEDELVLKDYLIIQTRENGL
EEEEEEECCCCCEEEEEEEEHHCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCC
TRIKVMPFNGQKPFELSFDEPAYVMGLDVNSQQDSNKLRIFYSSLTTPEAVYEYSLVNPD
EEEEEEECCCCCCEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHEEEECCCCC
RRDLLKQDQVLGGFDASQYRAERVFITARDGVKVPVSLVYRKDKFKKDGTNPLYQYGYGS
HHHHHHHHHHCCCCCHHHEEEEEEEEEECCCCCCCEEEEEEHHHCCCCCCCCHHHCCCCC
YGYTVEPDFSSSVISLLDRGFVYAIAHVRGSEMLGRPWYDDGKLLNKQNTFNDFIDVTTA
CCCEECCCCCHHHHHHHHCCCEEEEEEECCCHHCCCCCCCCCCEECCCCCHHHHHHHHHH
LTAQGYGDKNKVVASGGSAGGLLMGAIANQAPDKYFAIAAHVPFVDVVTTMLDESIPLTT
HEECCCCCCCCEEECCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCC
NEYDEWGNPNEKTYFDYMLSYSPYDNVTEQEYPHMLVTTGLHDSQVQYFEPAKWVAKLRD
CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
VKNQWYKSDDKVLLLNVDMEAGHGGKSGRYRQYQDTAQEYAFFLSLLGMAK
HHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSLLLTLGIAMLLSGCSTSKGQVPAPVAEKIPHVMTLHGVTRTDDYYWLRDDERKDPKV
CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCEEEECCCEECCCEEEECCCCCCCCCE
LAHLEAENRYTAAYFKPLKPLQDGLFKELTERLVADESSVPYQWHQHSYYSRYKEGGEYP
EEEEECCCCEEEEHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCC
LISRKGADGVEQVMLDVNERAKGHEFYGLGGASVSPDETMLAFGEDVLSRRVYHIYFKDL
EEECCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEEECC
ASGDMIVDVLENTEGRVVWANDNKHVFYIAKDLQTLLGYQVYRHELGTKQSSDVLVYEEQ
CCCCEEEEEECCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
DDSFYISLGKTLDESQIVLFQESTTTSEVSVLDASEPLGLFKPVLAREEGHEYSVSKLGD
CCEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEHHHCCC
TYYILTNWQATNFRLMKVAIKDAADKSKWQEVVAHNPNARIEDELVLKDYLIIQTRENGL
EEEEEEECCCCCEEEEEEEEHHCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCC
TRIKVMPFNGQKPFELSFDEPAYVMGLDVNSQQDSNKLRIFYSSLTTPEAVYEYSLVNPD
EEEEEEECCCCCCEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCCHHHEEEECCCCC
RRDLLKQDQVLGGFDASQYRAERVFITARDGVKVPVSLVYRKDKFKKDGTNPLYQYGYGS
HHHHHHHHHHCCCCCHHHEEEEEEEEEECCCCCCCEEEEEEHHHCCCCCCCCHHHCCCCC
YGYTVEPDFSSSVISLLDRGFVYAIAHVRGSEMLGRPWYDDGKLLNKQNTFNDFIDVTTA
CCCEECCCCCHHHHHHHHCCCEEEEEEECCCHHCCCCCCCCCCEECCCCCHHHHHHHHHH
LTAQGYGDKNKVVASGGSAGGLLMGAIANQAPDKYFAIAAHVPFVDVVTTMLDESIPLTT
HEECCCCCCCCEEECCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCC
NEYDEWGNPNEKTYFDYMLSYSPYDNVTEQEYPHMLVTTGLHDSQVQYFEPAKWVAKLRD
CCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
VKNQWYKSDDKVLLLNVDMEAGHGGKSGRYRQYQDTAQEYAFFLSLLGMAK
HHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1769955; 9097040; 9278503 [H]