| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176296
Identifier: 126176296
GI number: 126176296
Start: 4818160
End: 4819608
Strand: Reverse
Name: 126176296
Synonym: Sbal_4111
Alternate gene names: NA
Gene position: 4819608-4818160 (Counterclockwise)
Preceding gene: 126176297
Following gene: 126176295
Centisome position: 94.0
GC content: 47.55
Gene sequence:
>1449_bases GTGACGTTTCAAGGTTCTGTCTTGCTTCCTTCTCAGGAAGCCCTCATACAAAGAATGCATCATGTTGCCAGTTATAGCGA TCAACTACTGGTGCTTTCTGGTGTCAGCGGTTCAGGCAAAACCACCTTAGTGACCGGATTAGCGACCGATTTTGACGAGT CAAATGCAGCATTTGTGATTTGTCCTATGCATGCCGATAACGCTGAGATCCGCCGTAAAATTCTGGTCCAGTTAATTTCA TCCCCGATTTTTGACGACGATATTCCCCTCGCCGATACCCTGTTGCGGCTTGCTAGCACGCAAACTAAACCCTTACATAT CATTATCGATGATGCGCATTTATTGCCTAAAGCTTTGTGGGCTGAGTGCATTATTCTCAATCAAATTCAGTGTGCGGGTA AGAATATTGCCGTTACACTCACGGTTCCACCGGCATTTTTAGCAGATCTACTTCCACAATTACCGGAGCAGTTACGGCGG CAGATATTGCCTATCAGTATTGAGCCGTTAACTATGCCTGAGCGTGAGGCCTTGTATCAAACGTTACTGAGATACAGCGA TCAAAATCCTTTTACCCCAAGGGAAATTGTGCGCAGTCAGCTTGAGAAACAAACCGGTACGCCGCAGGAAGTGGTTAATC TATTAGATAAAGCCTTGCATAGCGCGCCTGAGAAGACATCTTCCTTGGTGAAATATAAAGCTGTGATGGTGACTGCTGTG AGTATGTTACTCGCCTTAGGCATTTGGCTTGGCGTTACTCAGCCTTTTTCTGAGGAGCAAGCCTTAGAGGCTGCGACTTA TCCTGCGATAGATTCACCCGCCTTTTTGTCCTACGGGCAAAAAGTCTTAGCGCCGTATTTTGCGCTGCGCGCTGAGCAAC TGAAGCTCGCCGCGGAGACTGCGAAAGTTATTGAAATCGAGACGGCAGAAGCCAAAACTGAACAAGCCGTCGATCCCTTA AGTGAATTCCACGGTGAAGCGCCACATCCCATGCCTGACGGTGCTGGCTTCGTGAGTGTGGGTGAAGTGAGTAGTAAGTC TTTTGGTGAGGATAAGCCGCTTGAGGATACAGAACCACAAGCCAAAGCGGCTCAGACTCAGCCTGCAACCATTAAAGCTG CAAAGGTCGATAAGCCGGTAGCTAAAGCGGGCTTGGATACGCAAAAGCCGCTCAAAGGTTACACAATACAGATTGCCAGT GTTGCTCAGTTGGATACCCTGCGTGCAACATTAAAGAGTATTGAGCATCTTGAGGGCGTTCGCGTTGCACAACATAAGCA GCGTTGGGTTGTCCTCGTTGGCAACTACAGCAGTAGCAAGTCAGCTTCGAATGCGGCGGCACAATTGGTTAAAGAGTATC GTCTCGAGCAACCTTGGGTAAGAAAATGGGCGGATTTAAAAGATTATCAACTAGAAGAAAGTCTGCCAAATCGTGAAATT TCAGAATAA
Upstream 100 bases:
>100_bases GCTCCCAACGGCTATAGGCCGCGCGGATGTGTTTAGTCAAGTCACTGAATCTACCCTCGAACAGGTTATTCGCTGCGCAT AAACACTGTGTGGTGGGCGA
Downstream 100 bases:
>100_bases ACAGAGTACAATCATGGCCTTTATTTTTGTCGGCATTCATCAAGTTAAATGATAAAAAAACACAGAGCCTTCCTTAAGTG GGCTGGCGGTAAATTTAAAT
Product: sporulation domain-containing protein
Products: NA
Alternate protein names: DamX Domain-Containing Protein; Sporulation Domain Protein; Sporulation
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MTFQGSVLLPSQEALIQRMHHVASYSDQLLVLSGVSGSGKTTLVTGLATDFDESNAAFVICPMHADNAEIRRKILVQLIS SPIFDDDIPLADTLLRLASTQTKPLHIIIDDAHLLPKALWAECIILNQIQCAGKNIAVTLTVPPAFLADLLPQLPEQLRR QILPISIEPLTMPEREALYQTLLRYSDQNPFTPREIVRSQLEKQTGTPQEVVNLLDKALHSAPEKTSSLVKYKAVMVTAV SMLLALGIWLGVTQPFSEEQALEAATYPAIDSPAFLSYGQKVLAPYFALRAEQLKLAAETAKVIEIETAEAKTEQAVDPL SEFHGEAPHPMPDGAGFVSVGEVSSKSFGEDKPLEDTEPQAKAAQTQPATIKAAKVDKPVAKAGLDTQKPLKGYTIQIAS VAQLDTLRATLKSIEHLEGVRVAQHKQRWVVLVGNYSSSKSASNAAAQLVKEYRLEQPWVRKWADLKDYQLEESLPNREI SE
Sequences:
>Translated_482_residues MTFQGSVLLPSQEALIQRMHHVASYSDQLLVLSGVSGSGKTTLVTGLATDFDESNAAFVICPMHADNAEIRRKILVQLIS SPIFDDDIPLADTLLRLASTQTKPLHIIIDDAHLLPKALWAECIILNQIQCAGKNIAVTLTVPPAFLADLLPQLPEQLRR QILPISIEPLTMPEREALYQTLLRYSDQNPFTPREIVRSQLEKQTGTPQEVVNLLDKALHSAPEKTSSLVKYKAVMVTAV SMLLALGIWLGVTQPFSEEQALEAATYPAIDSPAFLSYGQKVLAPYFALRAEQLKLAAETAKVIEIETAEAKTEQAVDPL SEFHGEAPHPMPDGAGFVSVGEVSSKSFGEDKPLEDTEPQAKAAQTQPATIKAAKVDKPVAKAGLDTQKPLKGYTIQIAS VAQLDTLRATLKSIEHLEGVRVAQHKQRWVVLVGNYSSSKSASNAAAQLVKEYRLEQPWVRKWADLKDYQLEESLPNREI SE >Mature_481_residues TFQGSVLLPSQEALIQRMHHVASYSDQLLVLSGVSGSGKTTLVTGLATDFDESNAAFVICPMHADNAEIRRKILVQLISS PIFDDDIPLADTLLRLASTQTKPLHIIIDDAHLLPKALWAECIILNQIQCAGKNIAVTLTVPPAFLADLLPQLPEQLRRQ ILPISIEPLTMPEREALYQTLLRYSDQNPFTPREIVRSQLEKQTGTPQEVVNLLDKALHSAPEKTSSLVKYKAVMVTAVS MLLALGIWLGVTQPFSEEQALEAATYPAIDSPAFLSYGQKVLAPYFALRAEQLKLAAETAKVIEIETAEAKTEQAVDPLS EFHGEAPHPMPDGAGFVSVGEVSSKSFGEDKPLEDTEPQAKAAQTQPATIKAAKVDKPVAKAGLDTQKPLKGYTIQIASV AQLDTLRATLKSIEHLEGVRVAQHKQRWVVLVGNYSSSKSASNAAAQLVKEYRLEQPWVRKWADLKDYQLEESLPNREIS E
Specific function: Unknown
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52859; Mature: 52728
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFQGSVLLPSQEALIQRMHHVASYSDQLLVLSGVSGSGKTTLVTGLATDFDESNAAFVI CCCCCCEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCEEEE CPMHADNAEIRRKILVQLISSPIFDDDIPLADTLLRLASTQTKPLHIIIDDAHLLPKALW EECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH AECIILNQIQCAGKNIAVTLTVPPAFLADLLPQLPEQLRRQILPISIEPLTMPEREALYQ HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHH TLLRYSDQNPFTPREIVRSQLEKQTGTPQEVVNLLDKALHSAPEKTSSLVKYKAVMVTAV HHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SMLLALGIWLGVTQPFSEEQALEAATYPAIDSPAFLSYGQKVLAPYFALRAEQLKLAAET HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKVIEIETAEAKTEQAVDPLSEFHGEAPHPMPDGAGFVSVGEVSSKSFGEDKPLEDTEPQ HHEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCH AKAAQTQPATIKAAKVDKPVAKAGLDTQKPLKGYTIQIASVAQLDTLRATLKSIEHLEGV HHHCCCCCCEEEHHHCCCHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCH RVAQHKQRWVVLVGNYSSSKSASNAAAQLVKEYRLEQPWVRKWADLKDYQLEESLPNREI HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHCCCCCCC SE CC >Mature Secondary Structure TFQGSVLLPSQEALIQRMHHVASYSDQLLVLSGVSGSGKTTLVTGLATDFDESNAAFVI CCCCCEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCEEEE CPMHADNAEIRRKILVQLISSPIFDDDIPLADTLLRLASTQTKPLHIIIDDAHLLPKALW EECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH AECIILNQIQCAGKNIAVTLTVPPAFLADLLPQLPEQLRRQILPISIEPLTMPEREALYQ HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHH TLLRYSDQNPFTPREIVRSQLEKQTGTPQEVVNLLDKALHSAPEKTSSLVKYKAVMVTAV HHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SMLLALGIWLGVTQPFSEEQALEAATYPAIDSPAFLSYGQKVLAPYFALRAEQLKLAAET HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKVIEIETAEAKTEQAVDPLSEFHGEAPHPMPDGAGFVSVGEVSSKSFGEDKPLEDTEPQ HHEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCH AKAAQTQPATIKAAKVDKPVAKAGLDTQKPLKGYTIQIASVAQLDTLRATLKSIEHLEGV HHHCCCCCCEEEHHHCCCHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCH RVAQHKQRWVVLVGNYSSSKSASNAAAQLVKEYRLEQPWVRKWADLKDYQLEESLPNREI HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHCCCCCCC SE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA