| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176266
Identifier: 126176266
GI number: 126176266
Start: 4787882
End: 4788235
Strand: Reverse
Name: 126176266
Synonym: Sbal_4080
Alternate gene names: NA
Gene position: 4788235-4787882 (Counterclockwise)
Preceding gene: 126176267
Following gene: 126176265
Centisome position: 93.39
GC content: 50.28
Gene sequence:
>354_bases ATGATGGCGGATGAGCAATTTACCGACAGCGGATTTTGGAACAAGATTAAACTCTTTAGCCGTCAGGCGGGCAGGGAAGT GATCGAGCGTGCCCTGTGGCTTTATTATGCGGCGCAGCAGCCGAATACGCCTAAATGGGCCAAGTCTGTCATCTTCGGTG CCTTGGCGTATTTTATTTCTCCCTTAGATGCGATCCCCGATCTCACACCTTTAGTGGGTTTTACCGATGACTTAGGTGCC CTTGCCGCAGCTTTGACTATGGTGACCTTATATATCGATGACGAAGTGAAATCCCTCGCGGCGGATAAACTGGCGCTCTG GTTTGGCGATAAACCGACGGAACCTAAGGTTTAA
Upstream 100 bases:
>100_bases CGTTTTAAGCAACAATTTGGCCTGACCCCTGCGGCTTATCGTCGTACACTGTGAGGAGGAATAGATTGATACTCAAACAA TCTCAAGCTGCAGGAGCGAT
Downstream 100 bases:
>100_bases GCCTAATGTGCTCGCCAAGACCTAAGTGATGCTAAATTGCGCTAAAAATATGATTTTATTAGGAGTCGTTGATTTGGTTT TTACTTAGATTTTCTGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MMADEQFTDSGFWNKIKLFSRQAGREVIERALWLYYAAQQPNTPKWAKSVIFGALAYFISPLDAIPDLTPLVGFTDDLGA LAAALTMVTLYIDDEVKSLAADKLALWFGDKPTEPKV
Sequences:
>Translated_117_residues MMADEQFTDSGFWNKIKLFSRQAGREVIERALWLYYAAQQPNTPKWAKSVIFGALAYFISPLDAIPDLTPLVGFTDDLGA LAAALTMVTLYIDDEVKSLAADKLALWFGDKPTEPKV >Mature_117_residues MMADEQFTDSGFWNKIKLFSRQAGREVIERALWLYYAAQQPNTPKWAKSVIFGALAYFISPLDAIPDLTPLVGFTDDLGA LAAALTMVTLYIDDEVKSLAADKLALWFGDKPTEPKV
Specific function: Unknown
COG id: COG3339
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13031; Mature: 13031
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMADEQFTDSGFWNKIKLFSRQAGREVIERALWLYYAAQQPNTPKWAKSVIFGALAYFIS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH PLDAIPDLTPLVGFTDDLGALAAALTMVTLYIDDEVKSLAADKLALWFGDKPTEPKV HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCC >Mature Secondary Structure MMADEQFTDSGFWNKIKLFSRQAGREVIERALWLYYAAQQPNTPKWAKSVIFGALAYFIS CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH PLDAIPDLTPLVGFTDDLGALAAALTMVTLYIDDEVKSLAADKLALWFGDKPTEPKV HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA