| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176251
Identifier: 126176251
GI number: 126176251
Start: 4772043
End: 4772879
Strand: Reverse
Name: 126176251
Synonym: Sbal_4065
Alternate gene names: NA
Gene position: 4772879-4772043 (Counterclockwise)
Preceding gene: 126176256
Following gene: 126176250
Centisome position: 93.09
GC content: 50.54
Gene sequence:
>837_bases ATGAAGATCATAGTCGTATTTATACTAATTGCTGTCGGGGTGTTTTTATTCCTTCGCGCGCAGCGATTGGCGAAAGAGGA ACAAGAGGCGATGAAACCCAAGTCGACCACGGTAAAACCTGTTTTTCCTACCGAAGACGCACCTATTTCCTCTGCTGCTG AGCCCGAGCGAGTAGAGCCTGAGCCAGTTGAGCAGGCTGAGGACACTCGCGTGGTGGAAGTTGAGCCTGTCATCGAAGTA GAAGCCGAATTGATGCCCCGTGAGACGAATGAGCCGGCGAACATTTCGGTGGAGCTAGACACAGATATCATCGAAGTCGA TATTCCTGCAGCTCATAATGAAGAGTCGGTGATCATTTTAGGCACCACGCCAACAGATGAACAAGCTGACGTTAAGACTG AAGCAGAGCCAGCATCGAGCACGCGTTCAGAGGTCGGTGCGCCAGGGGCTTGGGCGAATGTAACCTTAGTTCGGGCCTTT GAAGAATATCAAGGGGCAACGTCAGCCAGTGCTCGCTATACCGCGCTGCAAAATATGGTCGCAGAGTGCTACAAGCAGCG TAAATCGGCGGATTATCTCAACTATGGCGCTCAGTTAGCTGAAGAATATGTCGCACTGTTCCAAGCGGCTAGCGCCGAGC AATGCAAAGATACTGAGCTTAAGTCTTCCGGTTTCTTGCATTTAGCCACCTTGCTAAATGATACCCAAGCCTTCGATGCC GCCATTGTCATTTGCCGTAAAGCATTAGAGCTTGGGCTGAGCGATGGCACTGTCACTGGCTTTGAGGGTCGTATCAATCG GATTGAGAAAGCACAGGCTAAAGCAACTACTGCTTAA
Upstream 100 bases:
>100_bases TTTTAGCTAGACTCGGTTGCCATGGACACTGTCCTAATGGATTTTGGCAAACCAATTGACACGGCTTCTGACGAGAAGCA GCCATCAAAGGTGAACAAGA
Downstream 100 bases:
>100_bases CACTTTGGTTGGGAGCGCTTAGCGGGTAAACCCTTAAACGAAAAGCGGTTATTTCCCTCGTCTAAGCAGTGTAGAATCCC TGCTAACTGAATGCGCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKIIVVFILIAVGVFLFLRAQRLAKEEQEAMKPKSTTVKPVFPTEDAPISSAAEPERVEPEPVEQAEDTRVVEVEPVIEV EAELMPRETNEPANISVELDTDIIEVDIPAAHNEESVIILGTTPTDEQADVKTEAEPASSTRSEVGAPGAWANVTLVRAF EEYQGATSASARYTALQNMVAECYKQRKSADYLNYGAQLAEEYVALFQAASAEQCKDTELKSSGFLHLATLLNDTQAFDA AIVICRKALELGLSDGTVTGFEGRINRIEKAQAKATTA
Sequences:
>Translated_278_residues MKIIVVFILIAVGVFLFLRAQRLAKEEQEAMKPKSTTVKPVFPTEDAPISSAAEPERVEPEPVEQAEDTRVVEVEPVIEV EAELMPRETNEPANISVELDTDIIEVDIPAAHNEESVIILGTTPTDEQADVKTEAEPASSTRSEVGAPGAWANVTLVRAF EEYQGATSASARYTALQNMVAECYKQRKSADYLNYGAQLAEEYVALFQAASAEQCKDTELKSSGFLHLATLLNDTQAFDA AIVICRKALELGLSDGTVTGFEGRINRIEKAQAKATTA >Mature_278_residues MKIIVVFILIAVGVFLFLRAQRLAKEEQEAMKPKSTTVKPVFPTEDAPISSAAEPERVEPEPVEQAEDTRVVEVEPVIEV EAELMPRETNEPANISVELDTDIIEVDIPAAHNEESVIILGTTPTDEQADVKTEAEPASSTRSEVGAPGAWANVTLVRAF EEYQGATSASARYTALQNMVAECYKQRKSADYLNYGAQLAEEYVALFQAASAEQCKDTELKSSGFLHLATLLNDTQAFDA AIVICRKALELGLSDGTVTGFEGRINRIEKAQAKATTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30220; Mature: 30220
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS00307 LECTIN_LEGUME_BETA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIVVFILIAVGVFLFLRAQRLAKEEQEAMKPKSTTVKPVFPTEDAPISSAAEPERVEP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCC EPVEQAEDTRVVEVEPVIEVEAELMPRETNEPANISVELDTDIIEVDIPAAHNEESVIIL CCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCEEEE GTTPTDEQADVKTEAEPASSTRSEVGAPGAWANVTLVRAFEEYQGATSASARYTALQNMV ECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AECYKQRKSADYLNYGAQLAEEYVALFQAASAEQCKDTELKSSGFLHLATLLNDTQAFDA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEHHHHHCCHHHHHH AIVICRKALELGLSDGTVTGFEGRINRIEKAQAKATTA HHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIIVVFILIAVGVFLFLRAQRLAKEEQEAMKPKSTTVKPVFPTEDAPISSAAEPERVEP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCC EPVEQAEDTRVVEVEPVIEVEAELMPRETNEPANISVELDTDIIEVDIPAAHNEESVIIL CCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCEEEE GTTPTDEQADVKTEAEPASSTRSEVGAPGAWANVTLVRAFEEYQGATSASARYTALQNMV ECCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH AECYKQRKSADYLNYGAQLAEEYVALFQAASAEQCKDTELKSSGFLHLATLLNDTQAFDA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEHHHHHCCHHHHHH AIVICRKALELGLSDGTVTGFEGRINRIEKAQAKATTA HHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA