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The map label for this gene is rdoA [H]

Identifier: 126176247

GI number: 126176247

Start: 4768752

End: 4769774

Strand: Reverse

Name: rdoA [H]

Synonym: Sbal_4061

Alternate gene names: 126176247

Gene position: 4769774-4768752 (Counterclockwise)

Preceding gene: 126176248

Following gene: 126176246

Centisome position: 93.03

GC content: 50.83

Gene sequence:

>1023_bases
ATGAGTCAGAAGATGACGCCACCAACCACGAGTTCTAGCGGCGCTGAGTTCCATTTTCAAGCCCTAACACCGGATTTGAT
CTTAGATGCGATCGAAAGTCTGGGTGTGTACCCGGAAACGGGCTTACTCGCGCTGAATAGTTACGAGAATCGCGTGTATC
AGTTCCGTAGCGATGAAGGACTGCGTTATGTGGTGAAGTTCTATCGCCCAGACCGTTGGAGCGATGCGCAGATCCAAGAG
GAACATGATTATGCGCTCGCACTCGCGGCAGAAGATATCCCGATTGCCGTGCCTGTGATCATCGAAGGTCATACGTTACA
CAAGTACCAAGGCTATCGATTTACCCTGTTCCCTTCCTTGGGTGGCCGCGCCTTTGAAGTCGATAATTTAGAACAGCTGG
AATTAGTTGGCCGATTCATCGGTCGTATACATCAGTACGCGGCGCAAACTGTATTTGCTGAACGTGAACCGCTGAATCCG
CAGATTCTAGGCGCCGAGCCGCTCGCGTGGTTAAAGCAATCTAATCTAGTGCCTAACAGCCTACGCTTGCCGTTTTTTAC
CGTCGTTGAGCAAGTGTTGGCTAAGGCGAATGCGATTTGGGATCGCCAAGATTTTGCGGCCATTCGTTTGCATGGCGATT
TACACCCAGGCAATATTTTGTGGACGCCAGATGGTCCCGGATTCGTCGATTTAGACGATGCTCGCATGGGGCCGGCGATT
CAAGATTTATGGATGATGTTAACGGGTGATAGAGCGCAGCAGTTGATGCAGCTCGAGATATTACTCGAAGCCTATGAAGA
GTTTTGTGAGTTTGATACCAGACAGTTAGCCTTGATTGAACCGCTGCGGGCGCTGCGTATGGTGCACTACAACGCGTGGA
TTGGTCGTCGCTGGGACGATCCTGCTTTCCCGATGAACTTCCCGTGGTTTGGGGATGAAAAGTATTGGGAACAGCAGATC
TTGGCATTTAAGGAGCAACTTTTTGCCCTTGGCGAGCCACCACTGAGCCTAGTGCCTTATTAG

Upstream 100 bases:

>100_bases
ACGGCAACATTTGCTGGCTCTCGACCGAACGAGAAGCCGATTTTGAGGTGCTGGAATACTTAGCCACTTTGCTGCAACCT
CACCTAAGAGCGAACTGAAT

Downstream 100 bases:

>100_bases
TATTGAGCAAAATATGATGTCACAGACGTATCTTGTGACATTAGATTGAACTCTTAAGCTTGAGTTACACTCAAAAAATG
GAATATGTTAGTCTCCAGCC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSQKMTPPTTSSSGAEFHFQALTPDLILDAIESLGVYPETGLLALNSYENRVYQFRSDEGLRYVVKFYRPDRWSDAQIQE
EHDYALALAAEDIPIAVPVIIEGHTLHKYQGYRFTLFPSLGGRAFEVDNLEQLELVGRFIGRIHQYAAQTVFAEREPLNP
QILGAEPLAWLKQSNLVPNSLRLPFFTVVEQVLAKANAIWDRQDFAAIRLHGDLHPGNILWTPDGPGFVDLDDARMGPAI
QDLWMMLTGDRAQQLMQLEILLEAYEEFCEFDTRQLALIEPLRALRMVHYNAWIGRRWDDPAFPMNFPWFGDEKYWEQQI
LAFKEQLFALGEPPLSLVPY

Sequences:

>Translated_340_residues
MSQKMTPPTTSSSGAEFHFQALTPDLILDAIESLGVYPETGLLALNSYENRVYQFRSDEGLRYVVKFYRPDRWSDAQIQE
EHDYALALAAEDIPIAVPVIIEGHTLHKYQGYRFTLFPSLGGRAFEVDNLEQLELVGRFIGRIHQYAAQTVFAEREPLNP
QILGAEPLAWLKQSNLVPNSLRLPFFTVVEQVLAKANAIWDRQDFAAIRLHGDLHPGNILWTPDGPGFVDLDDARMGPAI
QDLWMMLTGDRAQQLMQLEILLEAYEEFCEFDTRQLALIEPLRALRMVHYNAWIGRRWDDPAFPMNFPWFGDEKYWEQQI
LAFKEQLFALGEPPLSLVPY
>Mature_339_residues
SQKMTPPTTSSSGAEFHFQALTPDLILDAIESLGVYPETGLLALNSYENRVYQFRSDEGLRYVVKFYRPDRWSDAQIQEE
HDYALALAAEDIPIAVPVIIEGHTLHKYQGYRFTLFPSLGGRAFEVDNLEQLELVGRFIGRIHQYAAQTVFAEREPLNPQ
ILGAEPLAWLKQSNLVPNSLRLPFFTVVEQVLAKANAIWDRQDFAAIRLHGDLHPGNILWTPDGPGFVDLDDARMGPAIQ
DLWMMLTGDRAQQLMQLEILLEAYEEFCEFDTRQLALIEPLRALRMVHYNAWIGRRWDDPAFPMNFPWFGDEKYWEQQIL
AFKEQLFALGEPPLSLVPY

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=327, Percent_Identity=52.2935779816514, Blast_Score=361, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 39058; Mature: 38927

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKMTPPTTSSSGAEFHFQALTPDLILDAIESLGVYPETGLLALNSYENRVYQFRSDEG
CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCC
LRYVVKFYRPDRWSDAQIQEEHDYALALAAEDIPIAVPVIIEGHTLHKYQGYRFTLFPSL
CEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEECCEEEEEEECC
GGRAFEVDNLEQLELVGRFIGRIHQYAAQTVFAEREPLNPQILGAEPLAWLKQSNLVPNS
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCC
LRLPFFTVVEQVLAKANAIWDRQDFAAIRLHGDLHPGNILWTPDGPGFVDLDDARMGPAI
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCEEECCCCCCCHHH
QDLWMMLTGDRAQQLMQLEILLEAYEEFCEFDTRQLALIEPLRALRMVHYNAWIGRRWDD
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PAFPMNFPWFGDEKYWEQQILAFKEQLFALGEPPLSLVPY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SQKMTPPTTSSSGAEFHFQALTPDLILDAIESLGVYPETGLLALNSYENRVYQFRSDEG
CCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECCCCC
LRYVVKFYRPDRWSDAQIQEEHDYALALAAEDIPIAVPVIIEGHTLHKYQGYRFTLFPSL
CEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCEEEEECCEEEEEEECC
GGRAFEVDNLEQLELVGRFIGRIHQYAAQTVFAEREPLNPQILGAEPLAWLKQSNLVPNS
CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHCCCCCCC
LRLPFFTVVEQVLAKANAIWDRQDFAAIRLHGDLHPGNILWTPDGPGFVDLDDARMGPAI
CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEECCCCCCEEECCCCCCCHHH
QDLWMMLTGDRAQQLMQLEILLEAYEEFCEFDTRQLALIEPLRALRMVHYNAWIGRRWDD
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
PAFPMNFPWFGDEKYWEQQILAFKEQLFALGEPPLSLVPY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]