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The map label for this gene is alsB [C]

Identifier: 126176223

GI number: 126176223

Start: 4740661

End: 4741689

Strand: Reverse

Name: alsB [C]

Synonym: Sbal_4037

Alternate gene names: 126176223

Gene position: 4741689-4740661 (Counterclockwise)

Preceding gene: 126176226

Following gene: 126176222

Centisome position: 92.48

GC content: 45.68

Gene sequence:

>1029_bases
ATGCGTTCGTGGATGTTAGCGTGTGTGTTTATCTGTACTGCGGGTTTTGGTGGGGCGGCTTGGGCAAAACTCGATGTTGT
ATTTTTTAATCCGGGGGCTGTCGATGACAGTTTTTGGGGGGACGTCGACCAATTGATGTTGGAGGCATCGACGACACTCA
ATATTAAGCTCGAAATCATTCATTCCGATCGCAATCATTTCAAGATGATCACCCAACTCAATGAGTTGTTAGCTTCCGCA
AAGGTACTGCCTAATTACGTTATTCTGGTTAATGAAAAACAATCCGCGATAAAAATGCTGCAAGCGCTTTCTCCACATCC
TATCTACGTGCAATTGATTTTAAATGATATTTCCATCGGTGAGCGTGATGCTCTACTGCAAGATCCCCATTGGCAAGAAT
ATCTGTTGCCCGCCATTATTCCCGATAATTACGCAATAGGTTCGGCGACCGCTAAGGGCTTAATGGACGACTTAGAGGGT
AAACCGGCTAAAGTTTTGTTGATTTCGGGCGATAAATCGACGCCTGCTTCAGTGCTACGTACCCAAGGTGCCAGTGATTA
TTTCTTTATGCAGGCCAATGCCACTCTGACTCAAACGGTTTATGGCCAGTGGAGCGACGCTGTGGCTTATGGTCAAGCGT
TAACCCTGCTGAATCGTTATCCCGATCTGAATGTGATTTGGACCGCCAGTGATCGTATGGCGATTGGGGTGCTTAAAGCA
TTGAAGGAAAAAGGCTTAGTCTCAGGTAAGGATGTATTTGTCAGTACGATCAATACGTCCCCCGAGATTTTACAGCTTTG
TCGCCAACACTCGGTGAGCATTATTGGTGGCGGGCACTTTATGGCTGGCGCGTTAGCTTTGGTCGAGTTGAAATATTATC
AGCAGCATAAGCACTATATTCCCTATGACAATGTCACCTTGTTCGGCGTTTTACTGCCTGATTCGGCATTTTATCAAATG
TTAGTTGCTCGGGATTGGCCACAGATTTTCCAGTCTCAGATTTTGAATAAGTTGCCCTTCAAGGCGTAA

Upstream 100 bases:

>100_bases
TTGGGCGGCGATGCGGTAACAAGGTTGTGAATCGATAATAATAAAGTGACCTCTTGTGAAGGATGACATTTGAGGGAACA
TGGTCGAGGAGAACTCGCCT

Downstream 100 bases:

>100_bases
TAACGGGTGTACATGAAGCATCGAAATCATTCTATTAGTCATAAGATGACGCTGACCATTATCGGGGTGAGCTCATTTTT
TGCTGTGTTAACTATGCTGG

Product: periplasmic sugar-binding protein

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: Sugar ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRSWMLACVFICTAGFGGAAWAKLDVVFFNPGAVDDSFWGDVDQLMLEASTTLNIKLEIIHSDRNHFKMITQLNELLASA
KVLPNYVILVNEKQSAIKMLQALSPHPIYVQLILNDISIGERDALLQDPHWQEYLLPAIIPDNYAIGSATAKGLMDDLEG
KPAKVLLISGDKSTPASVLRTQGASDYFFMQANATLTQTVYGQWSDAVAYGQALTLLNRYPDLNVIWTASDRMAIGVLKA
LKEKGLVSGKDVFVSTINTSPEILQLCRQHSVSIIGGGHFMAGALALVELKYYQQHKHYIPYDNVTLFGVLLPDSAFYQM
LVARDWPQIFQSQILNKLPFKA

Sequences:

>Translated_342_residues
MRSWMLACVFICTAGFGGAAWAKLDVVFFNPGAVDDSFWGDVDQLMLEASTTLNIKLEIIHSDRNHFKMITQLNELLASA
KVLPNYVILVNEKQSAIKMLQALSPHPIYVQLILNDISIGERDALLQDPHWQEYLLPAIIPDNYAIGSATAKGLMDDLEG
KPAKVLLISGDKSTPASVLRTQGASDYFFMQANATLTQTVYGQWSDAVAYGQALTLLNRYPDLNVIWTASDRMAIGVLKA
LKEKGLVSGKDVFVSTINTSPEILQLCRQHSVSIIGGGHFMAGALALVELKYYQQHKHYIPYDNVTLFGVLLPDSAFYQM
LVARDWPQIFQSQILNKLPFKA
>Mature_342_residues
MRSWMLACVFICTAGFGGAAWAKLDVVFFNPGAVDDSFWGDVDQLMLEASTTLNIKLEIIHSDRNHFKMITQLNELLASA
KVLPNYVILVNEKQSAIKMLQALSPHPIYVQLILNDISIGERDALLQDPHWQEYLLPAIIPDNYAIGSATAKGLMDDLEG
KPAKVLLISGDKSTPASVLRTQGASDYFFMQANATLTQTVYGQWSDAVAYGQALTLLNRYPDLNVIWTASDRMAIGVLKA
LKEKGLVSGKDVFVSTINTSPEILQLCRQHSVSIIGGGHFMAGALALVELKYYQQHKHYIPYDNVTLFGVLLPDSAFYQM
LVARDWPQIFQSQILNKLPFKA

Specific function: Part Of The Binding-Protein-Dependent Transport System Alsbac For D-Allose. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37941; Mature: 37941

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSWMLACVFICTAGFGGAAWAKLDVVFFNPGAVDDSFWGDVDQLMLEASTTLNIKLEII
CCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEEEEE
HSDRNHFKMITQLNELLASAKVLPNYVILVNEKQSAIKMLQALSPHPIYVQLILNDISIG
ECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEEECCCCC
ERDALLQDPHWQEYLLPAIIPDNYAIGSATAKGLMDDLEGKPAKVLLISGDKSTPASVLR
CCCCCCCCCCHHHHHCCEECCCCCEECCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHH
TQGASDYFFMQANATLTQTVYGQWSDAVAYGQALTLLNRYPDLNVIWTASDRMAIGVLKA
CCCCCCEEEEEECCEEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
LKEKGLVSGKDVFVSTINTSPEILQLCRQHSVSIIGGGHFMAGALALVELKYYQQHKHYI
HHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCC
PYDNVTLFGVLLPDSAFYQMLVARDWPQIFQSQILNKLPFKA
CCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRSWMLACVFICTAGFGGAAWAKLDVVFFNPGAVDDSFWGDVDQLMLEASTTLNIKLEII
CCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEEEEE
HSDRNHFKMITQLNELLASAKVLPNYVILVNEKQSAIKMLQALSPHPIYVQLILNDISIG
ECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEEEEEECCCCC
ERDALLQDPHWQEYLLPAIIPDNYAIGSATAKGLMDDLEGKPAKVLLISGDKSTPASVLR
CCCCCCCCCCHHHHHCCEECCCCCEECCHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHH
TQGASDYFFMQANATLTQTVYGQWSDAVAYGQALTLLNRYPDLNVIWTASDRMAIGVLKA
CCCCCCEEEEEECCEEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHH
LKEKGLVSGKDVFVSTINTSPEILQLCRQHSVSIIGGGHFMAGALALVELKYYQQHKHYI
HHHCCCCCCCEEEEEEECCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCCCCC
PYDNVTLFGVLLPDSAFYQMLVARDWPQIFQSQILNKLPFKA
CCCCEEEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA