| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176207
Identifier: 126176207
GI number: 126176207
Start: 4719626
End: 4720351
Strand: Reverse
Name: 126176207
Synonym: Sbal_4021
Alternate gene names: NA
Gene position: 4720351-4719626 (Counterclockwise)
Preceding gene: 126176210
Following gene: 126176202
Centisome position: 92.06
GC content: 42.29
Gene sequence:
>726_bases ATGCGCTTGAGTTTGCTGTTAATCTGCCTATTAATCTTACCGACGTATGCATTTCCTGCCTCGATAACCATTGGTAGTGC GTTAAATCGCCCACCCTATATTATCGAAGATGCCGAATCGGGACTTGAGATTGATATTATTAAGGCCGCCTTTAAGGAAA TGGGCCAGTCAGTTAACTTTAAATTTTACTCTCGTAAGCGCCAAGTCTTATATTTCAACAAAGACAGATTAGATGCCGTG ATGACCATGAATCCCGCAAATGGTGTTGATGGCTATTGGTCTAATGATTATGTCGACTATACCAATGTGGCGATTAGCTT GGCTGCGCAACACCTTGAAATAAAAAGTATTGCCGATCTAAAAAACTACAGTATTGCTGCCTTTGAAAATGCTCGCCTAT TGCTCGGTGCTGAATTTAATGCCGTAGCGCAACAGACGATTTATCGCGAAGTTGATACTCAATTAAGCCAAAATCGTATG TTGTACTTAGGCCGGATTAATACCGTGATTGCCGACCGTTATATTTTCACTCAATTGAATCGGTTTGTTGAGCCCAATAT CGACACCCAGCAAGCATTGAGCTATCACTTTATTTTCCCGCCGACATCCTATCGCATGGTGTTCCACAACTCAGTGGCGC GGGATACTTTTAATCAAGGGCTGGCAAAAATTAAGGCCAATGGGATTTATCAGGCCTTAGTGGTCAAATACTTAGGCAGT GTTTAG
Upstream 100 bases:
>100_bases GAGAGTGATCACCCTTACTGACAGTGGGTGAGGGGCGCGCTGTCTGGATCTCCCACCATTTACCGCTATAGTTATAATAC TAATAAGAGTGAGACACTGT
Downstream 100 bases:
>100_bases CAAGGCCTAAGTATTTGAGCGAAAGGCTGAATCGAGATGATCAACTACAGAGGTTAGCGTTCTGGCTCGTTAACAAACGC TTGCGTGAGAGGGCGTATTT
Product: ABC-type amino acid transport/signal transduction system
Products: NA
Alternate protein names: ABC-Type Amino Acid Transport/Signal Transduction Systems; Amino Acid ABC Transporter Periplasmic Protein; ABC Polar Amino Acid Transport System; Amino Acid Transporter; Signal Transduction Histidine Kinase-Like Protein
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MRLSLLLICLLILPTYAFPASITIGSALNRPPYIIEDAESGLEIDIIKAAFKEMGQSVNFKFYSRKRQVLYFNKDRLDAV MTMNPANGVDGYWSNDYVDYTNVAISLAAQHLEIKSIADLKNYSIAAFENARLLLGAEFNAVAQQTIYREVDTQLSQNRM LYLGRINTVIADRYIFTQLNRFVEPNIDTQQALSYHFIFPPTSYRMVFHNSVARDTFNQGLAKIKANGIYQALVVKYLGS V
Sequences:
>Translated_241_residues MRLSLLLICLLILPTYAFPASITIGSALNRPPYIIEDAESGLEIDIIKAAFKEMGQSVNFKFYSRKRQVLYFNKDRLDAV MTMNPANGVDGYWSNDYVDYTNVAISLAAQHLEIKSIADLKNYSIAAFENARLLLGAEFNAVAQQTIYREVDTQLSQNRM LYLGRINTVIADRYIFTQLNRFVEPNIDTQQALSYHFIFPPTSYRMVFHNSVARDTFNQGLAKIKANGIYQALVVKYLGS V >Mature_241_residues MRLSLLLICLLILPTYAFPASITIGSALNRPPYIIEDAESGLEIDIIKAAFKEMGQSVNFKFYSRKRQVLYFNKDRLDAV MTMNPANGVDGYWSNDYVDYTNVAISLAAQHLEIKSIADLKNYSIAAFENARLLLGAEFNAVAQQTIYREVDTQLSQNRM LYLGRINTVIADRYIFTQLNRFVEPNIDTQQALSYHFIFPPTSYRMVFHNSVARDTFNQGLAKIKANGIYQALVVKYLGS V
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27364; Mature: 27364
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSLLLICLLILPTYAFPASITIGSALNRPPYIIEDAESGLEIDIIKAAFKEMGQSVNF CCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCCCEEHHHHHHHHHHCCCCCE KFYSRKRQVLYFNKDRLDAVMTMNPANGVDGYWSNDYVDYTNVAISLAAQHLEIKSIADL EEECCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KNYSIAAFENARLLLGAEFNAVAQQTIYREVDTQLSQNRMLYLGRINTVIADRYIFTQLN CCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHH RFVEPNIDTQQALSYHFIFPPTSYRMVFHNSVARDTFNQGLAKIKANGIYQALVVKYLGS HHCCCCCCHHHHCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC V C >Mature Secondary Structure MRLSLLLICLLILPTYAFPASITIGSALNRPPYIIEDAESGLEIDIIKAAFKEMGQSVNF CCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCCCEEHHHHHHHHHHCCCCCE KFYSRKRQVLYFNKDRLDAVMTMNPANGVDGYWSNDYVDYTNVAISLAAQHLEIKSIADL EEECCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KNYSIAAFENARLLLGAEFNAVAQQTIYREVDTQLSQNRMLYLGRINTVIADRYIFTQLN CCCEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHH RFVEPNIDTQQALSYHFIFPPTSYRMVFHNSVARDTFNQGLAKIKANGIYQALVVKYLGS HHCCCCCCHHHHCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC V C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA