| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
Click here to switch to the map view.
The map label for this gene is fliH [C]
Identifier: 126176165
GI number: 126176165
Start: 4665711
End: 4666421
Strand: Reverse
Name: fliH [C]
Synonym: Sbal_3977
Alternate gene names: 126176165
Gene position: 4666421-4665711 (Counterclockwise)
Preceding gene: 126176166
Following gene: 126176164
Centisome position: 91.01
GC content: 47.96
Gene sequence:
>711_bases ATGGAAAACAAGCATTCTCGTTGGCGTCTAAATACCAATCTCGCACGTCGTTATCGTTTTCCTGCGTTGCACGACGCGAT TGAATCGAACTCAGATGCGGGCGGTGATTTTCAAAGTTATCAACAAGCATTTGACGAGGGTTATGACGAAGGTGTCATCC AAGGTAAGAGTGCGGGTTATGAGGCTGGTCTTGAAGAGGGCCGCATTGCTGGGCATGCTGCTGGTTTTCATCAAGGCAAG TTAGACGGGCAGTCAGCGGGCAGATCATCCATCGATGAGCAGCTCAACAGTTTGCTTGTGCCACTTGGTGCCTTGAGAGA GTTACTTGAAGACGGCCATGCAAAGCAGGTTCGTGAGCAGCAGAATTTGATCTTGGATTTAGTGCGCCGAGTGTCACAAC AAGTGATCCGTTGCGAATTAACACTGCAGCCGCAACAAATTCTTAAGCTGGTTGAAGAAACCTTGAGTGCGTTGCCCGAT GATCAAGTGGATGTCAAAATCCACTTAGAGCCAAGTGCGGTTGTGAAATTAAAAGAGCTCTCGGAAGATAAAATCCGTGG CTGGAACCTCATCGCAGATAGCAGTATTTCTGCGGGCAGTTGTCGTATTGTAAGTGATAAATCCGATGCAGATGCTTCAG TCGAAACGCGACTCGATGCCTGCATGAAGCAGGTTGAAACCAAGTTGAATGAGGTTGAGATTGGAGTCTGA
Upstream 100 bases:
>100_bases GAGCCAGTGGTGCGCGTAAAGAAATCATGGAACTGGCAAAGCAATTAATGCAAGAAGGCGAAATTGAATTGCAGTTATTT GAAGAACAGGTTGTTGTCTA
Downstream 100 bases:
>100_bases TGTATTTCATGACGATTGGCCTCAGGTTCCAGTTGCAAGGGTTTATGGACGTCTCATTCGAGTCAATGGTTTGTTGCTTG AGGCCGTTGGCTGTCAGCTT
Product: flagellar assembly protein H
Products: NA
Alternate protein names: Flagellar Assembly Protein FliH; Flagellar Assembly Protein; Polar Flagellar Assembly Protein FliH; Lateral Flagellar Assembly Protein FliH
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MENKHSRWRLNTNLARRYRFPALHDAIESNSDAGGDFQSYQQAFDEGYDEGVIQGKSAGYEAGLEEGRIAGHAAGFHQGK LDGQSAGRSSIDEQLNSLLVPLGALRELLEDGHAKQVREQQNLILDLVRRVSQQVIRCELTLQPQQILKLVEETLSALPD DQVDVKIHLEPSAVVKLKELSEDKIRGWNLIADSSISAGSCRIVSDKSDADASVETRLDACMKQVETKLNEVEIGV
Sequences:
>Translated_236_residues MENKHSRWRLNTNLARRYRFPALHDAIESNSDAGGDFQSYQQAFDEGYDEGVIQGKSAGYEAGLEEGRIAGHAAGFHQGK LDGQSAGRSSIDEQLNSLLVPLGALRELLEDGHAKQVREQQNLILDLVRRVSQQVIRCELTLQPQQILKLVEETLSALPD DQVDVKIHLEPSAVVKLKELSEDKIRGWNLIADSSISAGSCRIVSDKSDADASVETRLDACMKQVETKLNEVEIGV >Mature_236_residues MENKHSRWRLNTNLARRYRFPALHDAIESNSDAGGDFQSYQQAFDEGYDEGVIQGKSAGYEAGLEEGRIAGHAAGFHQGK LDGQSAGRSSIDEQLNSLLVPLGALRELLEDGHAKQVREQQNLILDLVRRVSQQVIRCELTLQPQQILKLVEETLSALPD DQVDVKIHLEPSAVVKLKELSEDKIRGWNLIADSSISAGSCRIVSDKSDADASVETRLDACMKQVETKLNEVEIGV
Specific function: Needed For Flagellar Regrowth And Assembly. [C]
COG id: COG1317
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26075; Mature: 26075
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKHSRWRLNTNLARRYRFPALHDAIESNSDAGGDFQSYQQAFDEGYDEGVIQGKSAGY CCCCCCCEEECHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC EAGLEEGRIAGHAAGFHQGKLDGQSAGRSSIDEQLNSLLVPLGALRELLEDGHAKQVREQ CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QNLILDLVRRVSQQVIRCELTLQPQQILKLVEETLSALPDDQVDVKIHLEPSAVVKLKEL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHH SEDKIRGWNLIADSSISAGSCRIVSDKSDADASVETRLDACMKQVETKLNEVEIGV CHHHHCCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MENKHSRWRLNTNLARRYRFPALHDAIESNSDAGGDFQSYQQAFDEGYDEGVIQGKSAGY CCCCCCCEEECHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC EAGLEEGRIAGHAAGFHQGKLDGQSAGRSSIDEQLNSLLVPLGALRELLEDGHAKQVREQ CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH QNLILDLVRRVSQQVIRCELTLQPQQILKLVEETLSALPDDQVDVKIHLEPSAVVKLKEL HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHH SEDKIRGWNLIADSSISAGSCRIVSDKSDADASVETRLDACMKQVETKLNEVEIGV CHHHHCCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA