| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176081
Identifier: 126176081
GI number: 126176081
Start: 4569623
End: 4570135
Strand: Reverse
Name: 126176081
Synonym: Sbal_3891
Alternate gene names: NA
Gene position: 4570135-4569623 (Counterclockwise)
Preceding gene: 126176082
Following gene: 126176080
Centisome position: 89.13
GC content: 49.32
Gene sequence:
>513_bases ATGTTGAGTTACGTTGCAGACTTAGATAAGCGAATGTTTTGTCATATCGTGAGTTTCACCCAACGTCATGGTTTATATGC CCATGCAAAGCGGGTATCGGCGAGTGGCGATGGGCATGTGTATTTATATTTGTCAGTGGGCTTGATGCTGACTCACGCTC AAGGGCAGGCCTTATTCAACTTGATGTTAGCGAGTTTTTTGGTGGAGTTGCCGCTGTATTTACTGTTGAAAAATAGCATT CGCCGTACACGACCCTGCCATGCGCTTGTGGGATTTGAGAGTGGCTTTGAGCCATCTGATCGCTTCAGTTTACCGTCGGG TCATACGGCCGCAGCCTTTGTGATGGCAATGAGTGTGGCGCAAGTTTACCCAGCAGCGGCTCCTATCGTGTTTTTATGGG CTTTTAGCATAGGGGGCTCACGTATCGCACTCGGCGTGCATTACCCCTTAGATATTTTGGCAGGAGCTTCATTGGGGAGC GGGGCGGTATTGCTGGTTCATCCGGTGATTTAA
Upstream 100 bases:
>100_bases AGTCGGTTGCGTGATACCAAGCACTCTAAGCGTCGTCGAGAGAATGCACAGATTAACATCGCAGTAAAACTCGCTGGCAT GCCAGCAAGGAGCCTGTTTT
Downstream 100 bases:
>100_bases TTCAAACAAGCGCACGTTAATCATTTCATCTCATTAGTTGGAATTCTCCTTCACTCATCAGTTTAAGGATACGTAATGCG AATACTCTACGGAGTTCAAG
Product: phosphoesterase PA-phosphatase related
Products: NA
Alternate protein names: Membrane-Associated Phospholipid Phosphatase; PAP2 Family Protein; Phosphoesterase PA-Phosphatase Related Protein; Phosphoesterase PA-Phosphatase-Like Protein; PAP2 Superfamily Protein; Phospholipid Phosphatase; Acid Phosphatase-Like Protein; PA-Phosphatase-Like Phosphoesterase; Type II Phosphatidic Acid Phosphatase; Phosphoesterase Family Protein
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MLSYVADLDKRMFCHIVSFTQRHGLYAHAKRVSASGDGHVYLYLSVGLMLTHAQGQALFNLMLASFLVELPLYLLLKNSI RRTRPCHALVGFESGFEPSDRFSLPSGHTAAAFVMAMSVAQVYPAAAPIVFLWAFSIGGSRIALGVHYPLDILAGASLGS GAVLLVHPVI
Sequences:
>Translated_170_residues MLSYVADLDKRMFCHIVSFTQRHGLYAHAKRVSASGDGHVYLYLSVGLMLTHAQGQALFNLMLASFLVELPLYLLLKNSI RRTRPCHALVGFESGFEPSDRFSLPSGHTAAAFVMAMSVAQVYPAAAPIVFLWAFSIGGSRIALGVHYPLDILAGASLGS GAVLLVHPVI >Mature_170_residues MLSYVADLDKRMFCHIVSFTQRHGLYAHAKRVSASGDGHVYLYLSVGLMLTHAQGQALFNLMLASFLVELPLYLLLKNSI RRTRPCHALVGFESGFEPSDRFSLPSGHTAAAFVMAMSVAQVYPAAAPIVFLWAFSIGGSRIALGVHYPLDILAGASLGS GAVLLVHPVI
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24583289, Length=181, Percent_Identity=31.4917127071823, Blast_Score=65, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18358; Mature: 18358
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSYVADLDKRMFCHIVSFTQRHGLYAHAKRVSASGDGHVYLYLSVGLMLTHAQGQALFN CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEECCCEECCCHHHHHH LMLASFLVELPLYLLLKNSIRRTRPCHALVGFESGFEPSDRFSLPSGHTAAAFVMAMSVA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH QVYPAAAPIVFLWAFSIGGSRIALGVHYPLDILAGASLGSGAVLLVHPVI HHCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCEEEEEEECC >Mature Secondary Structure MLSYVADLDKRMFCHIVSFTQRHGLYAHAKRVSASGDGHVYLYLSVGLMLTHAQGQALFN CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEECCCEECCCHHHHHH LMLASFLVELPLYLLLKNSIRRTRPCHALVGFESGFEPSDRFSLPSGHTAAAFVMAMSVA HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH QVYPAAAPIVFLWAFSIGGSRIALGVHYPLDILAGASLGSGAVLLVHPVI HHCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA