| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is hap [H]
Identifier: 126176065
GI number: 126176065
Start: 4550058
End: 4552394
Strand: Direct
Name: hap [H]
Synonym: Sbal_3874
Alternate gene names: 126176065
Gene position: 4550058-4552394 (Clockwise)
Preceding gene: 126176064
Following gene: 126176069
Centisome position: 88.74
GC content: 48.4
Gene sequence:
>2337_bases ATGATGCTAAACAAAAAACTGTCGCTACTCTTCATTGCTGTGTCGGCCACGTTAGGCACATCAGCATTTGCTGCTGATGT TGTCGATGTCGGCACACTTAGAAGCGCGTCTTCAAGCAATAACTTAGTGTCTCAGTTCAACTTAGACGCAGGTAGCCAAC TCAAAGTCGAGAAAAAACTCGACCTAGGTCAAGGCAAGCAGAAACAACGTTTACAACAATATTTCCATGACGTGCCTGTT TATGGTTTCTCTGTTGCAACGTCACAATCGAGCATGGGCTTCTACAGCGACATGTCTGGCCGCGTATTAAAAAATATTGA AAAGTCGGCTGATTTTGTCAAACCCACTTTAACGGCTAACAAAGCCTTAGACATTGCCATTCGTGGCAAGTCAGAGAAAG CTGTTGCCGGCCTAAAAGCTGAAAACAAACAAGCTAAATTATGGCTTTACCTTGATGATGCGGCTAAAACTCGCCTCGTT TATGTGACGTCTTTTGTGGTATATGGCGATGAGCCAAGCCGTCCATTCACTATGATTGACGCGCACTCAGGTGAAGTGCT CAAGCGTTGGGAAGGGATTAACCACGCCGCGAGCGGTACAGGTCCTGGCGGTAACATCAAGACTGGCCAATACGAATACG GTACGGATTTTTCTTACTTAGACGTTGAAGTGAGCGGTGACACCTGCACCATGAACTCACCTAACGTGAAAACCGTTAAC TTAAACGGTGCCACATCAGGCGCAACAGCCTTCTCTTATACTTGCCCACGCAATACAGTTAAAGAGATCAACGGTGCTTA CTCGCCATTAAACGATGCGCACTATTTTGGTAACGTGATCTACAACATGTATAGCGAGTGGTACAACACTGCGCCGTTAA CTTTCCAGTTAACCATGCGGGTTCACTACAGCAGCAACTACGAAAATGCCTTCTGGGACGGCAGTGCTATGACCTTCGGT GATGGCGCAACGACCTTCTACCCATTAGTGAGCTTAGATGTCTCGGCACACGAAGTGAGCCATGGTTTCACTGAGCAAAA CTCAGGCCTGATTTACGATGCTCAATCTGGTGGCATGAACGAAGCCTTCTCAGATATGGCGGGTGAAGCTGCTGAATTTT ACATGCACGGCACGAACGACTGGTTAGTCGGCGCTGATATCTTTAAAGGCAATGGCGCACTGCGTTACATGGCAGATCCA ACCTTAGACGGAATCTCAATCGGCCATATCGACGATTACTATGATGGCATCGACGTACACCACAGTTCAGGTGTCTTCAA CAAAGCCTTCTACACACTCGCAAACTTACCGGGCTGGGATACACGCACTGCATTCCAAACATTTGTGGTCGCTAACCAAT TATATTGGACAGCTGACAGCTTGTTCTGGCAAGGCGCTTGTGGCGTTAAATCTGCGGCGACTGACTTAGGCTTAAGTGCT GATGATGTGGTTACTGCGTTTGCTGCAGTAGGTATCACACCTTGTGAAACGCCACCACCACCGCCACCACCAGAAGCCAC TGAGCTCGCGAACGGTGTCGCTGTGACGGATTTAGCGGGCGCATCTGGTAGCAAACAATACTACAAACTCGACGTAGCAA GCGGTGCAACCAACCTGAGCTTTAATATGTCAGGCGGCACGGGTGATGCGGACATGTATGTTAAATTCGGCCAAGCTCCT ACCTCTAGTAGCTATGATTGCCGTCCATACAAAGCCGGTAATGCCGAAAGCTGCCCTATCGATCCAGCCCAAACAGGAAC TTATTGGGTCATGGTCAGTGGCTATAGCAGCTACACAGGTGTGAGCCTAGTGGGTGCTTATGACGGTGGCGATGAGATAC CAAACCAAGATCCTACAGCGGGCTTTACGGCAAGCTTTGCCAACGGTAACGGTAGCTTCACTAGCACCAGTACTGACAGC GATGGTGATGTCGTTGCATGGAGCTGGAGTTTCGGTGATGGCACGACTGCTTCAGGTGCAAGTGTAAATCATCAGTATGC TCAGTCAGGCAACTACACAGTGACATTGACAGTGACTGACAACGATGGCGCAACAGCAAGCACTTCTGAAGAATTTGCAG TTGAAGTGCCAGAAGTGGCGTTAGAAATGACAGTGAAAAACGCTAACAAATCTCGTCGCGGCAGCATTCGTGTTGCACTC GCATGGGAAGGTCATAACGCTGATGAGTACACTATCTTCCGTAACGGCGTTGCGGTAGGTACTTCAAGCAATTCGTCGTT TATTGACCGTTTCACTGACCTAGCTGGCACTAGCTTCAGCTATAAAGTGTGTGAAACTAACGGCCCTTGCTCAAACGAAG AAACCGTTAACTTTTAA
Upstream 100 bases:
>100_bases CGACGACCCTGTAGAAATTACAATAAAAAAACGCTCGCCCGAGCCAGTTAAGCAGTATGGCATTCCAACGTTAATGACAA ACGGAAAAAGGATTTTAAGC
Downstream 100 bases:
>100_bases TCGCATAAGATAATCGTATCGTGGTGCTAGCGTAAAATCCTAGCGCCAATTTATCGATAAACTTCTCGTTTCTTGTTAAT GCCACTCAGCCTTTTTTGAG
Product: peptidase M4 thermolysin
Products: NA
Alternate protein names: HA/protease; Vibriolysin [H]
Number of amino acids: Translated: 778; Mature: 778
Protein sequence:
>778_residues MMLNKKLSLLFIAVSATLGTSAFAADVVDVGTLRSASSSNNLVSQFNLDAGSQLKVEKKLDLGQGKQKQRLQQYFHDVPV YGFSVATSQSSMGFYSDMSGRVLKNIEKSADFVKPTLTANKALDIAIRGKSEKAVAGLKAENKQAKLWLYLDDAAKTRLV YVTSFVVYGDEPSRPFTMIDAHSGEVLKRWEGINHAASGTGPGGNIKTGQYEYGTDFSYLDVEVSGDTCTMNSPNVKTVN LNGATSGATAFSYTCPRNTVKEINGAYSPLNDAHYFGNVIYNMYSEWYNTAPLTFQLTMRVHYSSNYENAFWDGSAMTFG DGATTFYPLVSLDVSAHEVSHGFTEQNSGLIYDAQSGGMNEAFSDMAGEAAEFYMHGTNDWLVGADIFKGNGALRYMADP TLDGISIGHIDDYYDGIDVHHSSGVFNKAFYTLANLPGWDTRTAFQTFVVANQLYWTADSLFWQGACGVKSAATDLGLSA DDVVTAFAAVGITPCETPPPPPPPEATELANGVAVTDLAGASGSKQYYKLDVASGATNLSFNMSGGTGDADMYVKFGQAP TSSSYDCRPYKAGNAESCPIDPAQTGTYWVMVSGYSSYTGVSLVGAYDGGDEIPNQDPTAGFTASFANGNGSFTSTSTDS DGDVVAWSWSFGDGTTASGASVNHQYAQSGNYTVTLTVTDNDGATASTSEEFAVEVPEVALEMTVKNANKSRRGSIRVAL AWEGHNADEYTIFRNGVAVGTSSNSSFIDRFTDLAGTSFSYKVCETNGPCSNEETVNF
Sequences:
>Translated_778_residues MMLNKKLSLLFIAVSATLGTSAFAADVVDVGTLRSASSSNNLVSQFNLDAGSQLKVEKKLDLGQGKQKQRLQQYFHDVPV YGFSVATSQSSMGFYSDMSGRVLKNIEKSADFVKPTLTANKALDIAIRGKSEKAVAGLKAENKQAKLWLYLDDAAKTRLV YVTSFVVYGDEPSRPFTMIDAHSGEVLKRWEGINHAASGTGPGGNIKTGQYEYGTDFSYLDVEVSGDTCTMNSPNVKTVN LNGATSGATAFSYTCPRNTVKEINGAYSPLNDAHYFGNVIYNMYSEWYNTAPLTFQLTMRVHYSSNYENAFWDGSAMTFG DGATTFYPLVSLDVSAHEVSHGFTEQNSGLIYDAQSGGMNEAFSDMAGEAAEFYMHGTNDWLVGADIFKGNGALRYMADP TLDGISIGHIDDYYDGIDVHHSSGVFNKAFYTLANLPGWDTRTAFQTFVVANQLYWTADSLFWQGACGVKSAATDLGLSA DDVVTAFAAVGITPCETPPPPPPPEATELANGVAVTDLAGASGSKQYYKLDVASGATNLSFNMSGGTGDADMYVKFGQAP TSSSYDCRPYKAGNAESCPIDPAQTGTYWVMVSGYSSYTGVSLVGAYDGGDEIPNQDPTAGFTASFANGNGSFTSTSTDS DGDVVAWSWSFGDGTTASGASVNHQYAQSGNYTVTLTVTDNDGATASTSEEFAVEVPEVALEMTVKNANKSRRGSIRVAL AWEGHNADEYTIFRNGVAVGTSSNSSFIDRFTDLAGTSFSYKVCETNGPCSNEETVNF >Mature_778_residues MMLNKKLSLLFIAVSATLGTSAFAADVVDVGTLRSASSSNNLVSQFNLDAGSQLKVEKKLDLGQGKQKQRLQQYFHDVPV YGFSVATSQSSMGFYSDMSGRVLKNIEKSADFVKPTLTANKALDIAIRGKSEKAVAGLKAENKQAKLWLYLDDAAKTRLV YVTSFVVYGDEPSRPFTMIDAHSGEVLKRWEGINHAASGTGPGGNIKTGQYEYGTDFSYLDVEVSGDTCTMNSPNVKTVN LNGATSGATAFSYTCPRNTVKEINGAYSPLNDAHYFGNVIYNMYSEWYNTAPLTFQLTMRVHYSSNYENAFWDGSAMTFG DGATTFYPLVSLDVSAHEVSHGFTEQNSGLIYDAQSGGMNEAFSDMAGEAAEFYMHGTNDWLVGADIFKGNGALRYMADP TLDGISIGHIDDYYDGIDVHHSSGVFNKAFYTLANLPGWDTRTAFQTFVVANQLYWTADSLFWQGACGVKSAATDLGLSA DDVVTAFAAVGITPCETPPPPPPPEATELANGVAVTDLAGASGSKQYYKLDVASGATNLSFNMSGGTGDADMYVKFGQAP TSSSYDCRPYKAGNAESCPIDPAQTGTYWVMVSGYSSYTGVSLVGAYDGGDEIPNQDPTAGFTASFANGNGSFTSTSTDS DGDVVAWSWSFGDGTTASGASVNHQYAQSGNYTVTLTVTDNDGATASTSEEFAVEVPEVALEMTVKNANKSRRGSIRVAL AWEGHNADEYTIFRNGVAVGTSSNSSFIDRFTDLAGTSFSYKVCETNGPCSNEETVNF
Specific function: May play a role in the pathogenesis of cholera. Hap nicks and activates the A subunit of cholera enterotoxin and related enterotoxins [H]
COG id: COG3227
COG function: function code E; Zinc metalloprotease (elastase)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M4 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005075 - InterPro: IPR007280 - InterPro: IPR013856 - InterPro: IPR001570 - InterPro: IPR011096 [H]
Pfam domain/function: PF07504 FTP; PF03413 PepSY; PF01447 Peptidase_M4; PF02868 Peptidase_M4_C; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 83174; Mature: 83174
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS50093 PKD ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLNKKLSLLFIAVSATLGTSAFAADVVDVGTLRSASSSNNLVSQFNLDAGSQLKVEKKL CCCCCCEEEEEEEEEHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEECC DLGQGKQKQRLQQYFHDVPVYGFSVATSQSSMGFYSDMSGRVLKNIEKSADFVKPTLTAN CCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCC KALDIAIRGKSEKAVAGLKAENKQAKLWLYLDDAAKTRLVYVTSFVVYGDEPSRPFTMID CEEEEEEECCCCCEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCCCCEEEEE AHSGEVLKRWEGINHAASGTGPGGNIKTGQYEYGTDFSYLDVEVSGDTCTMNSPNVKTVN CCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCEEECCCCCEEEEE LNGATSGATAFSYTCPRNTVKEINGAYSPLNDAHYFGNVIYNMYSEWYNTAPLTFQLTMR ECCCCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEE VHYSSNYENAFWDGSAMTFGDGATTFYPLVSLDVSAHEVSHGFTEQNSGLIYDAQSGGMN EEECCCCCCEEECCCEEEECCCCCEEEEEEEECCCHHHHHCCCCCCCCCEEEECCCCCCH EAFSDMAGEAAEFYMHGTNDWLVGADIFKGNGALRYMADPTLDGISIGHIDDYYDGIDVH HHHHHHCCCCEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCCEEECCCHHHCCCEEEE HSSGVFNKAFYTLANLPGWDTRTAFQTFVVANQLYWTADSLFWQGACGVKSAATDLGLSA CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECHHEECCCCCCCHHHHHCCCCH DDVVTAFAAVGITPCETPPPPPPPEATELANGVAVTDLAGASGSKQYYKLDVASGATNLS HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCEEE FNMSGGTGDADMYVKFGQAPTSSSYDCRPYKAGNAESCPIDPAQTGTYWVMVSGYSSYTG EEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC VSLVGAYDGGDEIPNQDPTAGFTASFANGNGSFTSTSTDSDGDVVAWSWSFGDGTTASGA EEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEECCCCCCCCCC SVNHQYAQSGNYTVTLTVTDNDGATASTSEEFAVEVPEVALEMTVKNANKSRRGSIRVAL CCCCHHHCCCCEEEEEEEECCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEEEE AWEGHNADEYTIFRNGVAVGTSSNSSFIDRFTDLAGTSFSYKVCETNGPCSNEETVNF EECCCCCCEEEEEECCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure MMLNKKLSLLFIAVSATLGTSAFAADVVDVGTLRSASSSNNLVSQFNLDAGSQLKVEKKL CCCCCCEEEEEEEEEHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEECC DLGQGKQKQRLQQYFHDVPVYGFSVATSQSSMGFYSDMSGRVLKNIEKSADFVKPTLTAN CCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCC KALDIAIRGKSEKAVAGLKAENKQAKLWLYLDDAAKTRLVYVTSFVVYGDEPSRPFTMID CEEEEEEECCCCCEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCCCCCEEEEE AHSGEVLKRWEGINHAASGTGPGGNIKTGQYEYGTDFSYLDVEVSGDTCTMNSPNVKTVN CCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCEEECCCCCEEEEE LNGATSGATAFSYTCPRNTVKEINGAYSPLNDAHYFGNVIYNMYSEWYNTAPLTFQLTMR ECCCCCCCEEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEE VHYSSNYENAFWDGSAMTFGDGATTFYPLVSLDVSAHEVSHGFTEQNSGLIYDAQSGGMN EEECCCCCCEEECCCEEEECCCCCEEEEEEEECCCHHHHHCCCCCCCCCEEEECCCCCCH EAFSDMAGEAAEFYMHGTNDWLVGADIFKGNGALRYMADPTLDGISIGHIDDYYDGIDVH HHHHHHCCCCEEEEEECCCCEEEEEEEEECCCEEEEEECCCCCCEEECCCHHHCCCEEEE HSSGVFNKAFYTLANLPGWDTRTAFQTFVVANQLYWTADSLFWQGACGVKSAATDLGLSA CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECHHEECCCCCCCHHHHHCCCCH DDVVTAFAAVGITPCETPPPPPPPEATELANGVAVTDLAGASGSKQYYKLDVASGATNLS HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCEEE FNMSGGTGDADMYVKFGQAPTSSSYDCRPYKAGNAESCPIDPAQTGTYWVMVSGYSSYTG EEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC VSLVGAYDGGDEIPNQDPTAGFTASFANGNGSFTSTSTDSDGDVVAWSWSFGDGTTASGA EEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEEEEECCCCCCCCCC SVNHQYAQSGNYTVTLTVTDNDGATASTSEEFAVEVPEVALEMTVKNANKSRRGSIRVAL CCCCHHHCCCCEEEEEEEECCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEEEE AWEGHNADEYTIFRNGVAVGTSSNSSFIDRFTDLAGTSFSYKVCETNGPCSNEETVNF EECCCCCCEEEEEECCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2045361; 10952301; 2123831 [H]