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The map label for this gene is 126176063

Identifier: 126176063

GI number: 126176063

Start: 4547159

End: 4548724

Strand: Direct

Name: 126176063

Synonym: Sbal_3872

Alternate gene names: NA

Gene position: 4547159-4548724 (Clockwise)

Preceding gene: 126176061

Following gene: 126176064

Centisome position: 88.68

GC content: 47.38

Gene sequence:

>1566_bases
ATGCAATTACAGCAATTCCAAACAGTCAGGTTAATTTTAGGCGATCAACTCAATGCCCAACATTCTTGGTTTAACCGTGT
TGATGATCAAGTGCTGTATGTGATTGCAGAACTGCACCAAGAAAACACTTATGTGACGCATCATGTGCAAAAGATATGCG
CCTTCTTTGCGGCAATGGCGCAATTTGCCAAAGAGCTGCGTGCGCAAGGGCATCAAGTGCTCTATCTCACCCTTGATGAC
ACCTTCAATAACACTCAGGGCTATAGCGATCTACTGGGGCTCATTCAACATCAAGTGACCCTGGTTGGCGCAATAAAGTT
TGAATACCAAAGGCCAGATGAATACCGCCTGCTTGAGCAATTGAGTCAGCTTAAGCTCAACACCGCCGTGGTGAACTGTG
TCGATACAGAGCATTTTATCTTGCCGTTTGACGAAATCGATGCGCAGTTCCCCGTCGGCAAACACATTATGATGGAGCAC
TTTTATCGCCGTATGCGTAAACGCTTCAACATCTTGATGCAAGAAGGAAAACCACTCGGTGGGCAATGGAACTTTGATGC
CAGCAACCGTCAGAAACTTAAAACTCAGGATATAAAAGTCTTGCCTGAGCCATTAATGTTTAGCTTCGATGTGACGGAAA
TTCTCGCTAGGCTTGAGCGTCACCAAATCCCGACCATGGGTCGCATTGATGCGCCATTGCTGTGGCCGATAAACCGTGCG
CAAAGCCTCACACTATTGACGTATTTTTGTCAGGTTTGCTTGCCATCCTTTGGCCGCTTTCAAGATGCCATGACAGCGCA
ACATCCCGCCAAGTGGAGCTTGTACCATAGTCGACTATCATTCAGCCTTAACAGCAAATTAATCAGCCCGTTAGAAGTCA
TCAATGCGGCCATCGACAGCTATCAAACCAATGCTGAAATTGATATCGCCCAAATCGAAGGATTTGTGCGGCAGATATTA
GGTTGGCGAGAATACGTTCGCGGCATTTACTGGGCCAATATGCCGCAGTACGCCAGCACTAACGCGCTCAATGCCCATGG
GACGCTGCCCGATTATTTTTGGCATGGCGACACTAAAATGAACTGCATGCGACAAGCGTTATCCCAATCATTAGATTTTG
CCTACGCCCATCATATTCAGCGCTTAATGGTGATCGGCAATTTCTGTTTATTAACTGAAATCGAGCCAAATCAAGTCGAT
GAGTGGTATTTAGGCGTGTATGTTGACGCCATAGAATGGGTTGAAATGCCCAACACTCGCGGCATGGCATTGTTTGCCGA
CGGGGGTATTGTCGGTACTAAACCCTACGCCGCCAGCGGTTCTTACATCAATAAAATGAGTGATTATTGCAGCGGCTGTC
ATTACAAGATAAAAGAGCGCAGCGGCGCACTCGCCTGCCCGTTCAATAGCTTTTATTGGCGCTTTATGGACAAACACCGC
GCAAGATTGTCGCAGAACCCCAGGATCGGCATGCTATACCAGACTTGGGACAAGATGGACGAGTCCGCAAGGCATGCCAT
ATTAGCCACGGCCGAACACAATCTTGTTCATCTAAACCGTTTATAG

Upstream 100 bases:

>100_bases
ACTATAAAAACTTCCCCTGTAGAGCTACCTTCAGATTGATCCCAATCCCCTATTTAACCGTAACCCTCAATTGAAAATTG
TCATTCAACGAGTCCACTTA

Downstream 100 bases:

>100_bases
TGGAGAATTTGCTATGAAAGTACTTATCGTCGGTGGAAGTGGGGGTATTGGTCAAGCTATGGTTAAGCAAGTCCAAGAGA
CATATCCCGACGCCACAGTG

Product: deoxyribodipyrimidine photolyase-like protein

Products: NA

Alternate protein names: Deoxyribodipyrimidine Photolyase-Like Protein; Photolyase; Deoxyribodipyrimidine Photolyase Family Protein; Deoxyribodipyrimidine Photolyase; Photolyase Protein Family Protein; Deoxyribodipyrimidine Photolyase-Like Protein Protein; Photolyase Family Protein; Cryptochrome/Photolyase; DNA Photolyase; Bcct Transporter; Protein Related Deoxyribodipyrimidine Photolyase; Deoxyribodipyrimidine Photo-Lyase; Cryptochrome/Photolyase-Related; Photolyase Related Protein; BCCT Transporter; Alpha-Deoxyribodipyrimidine Photolyase-Related Protein; Deoxyribodipyrimidine Photolyase Related Protein; A Deoxyribodipyrimidine Photolyase-Like Protein; Deoxyribodipyrimidine Photolyase Homolog

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MQLQQFQTVRLILGDQLNAQHSWFNRVDDQVLYVIAELHQENTYVTHHVQKICAFFAAMAQFAKELRAQGHQVLYLTLDD
TFNNTQGYSDLLGLIQHQVTLVGAIKFEYQRPDEYRLLEQLSQLKLNTAVVNCVDTEHFILPFDEIDAQFPVGKHIMMEH
FYRRMRKRFNILMQEGKPLGGQWNFDASNRQKLKTQDIKVLPEPLMFSFDVTEILARLERHQIPTMGRIDAPLLWPINRA
QSLTLLTYFCQVCLPSFGRFQDAMTAQHPAKWSLYHSRLSFSLNSKLISPLEVINAAIDSYQTNAEIDIAQIEGFVRQIL
GWREYVRGIYWANMPQYASTNALNAHGTLPDYFWHGDTKMNCMRQALSQSLDFAYAHHIQRLMVIGNFCLLTEIEPNQVD
EWYLGVYVDAIEWVEMPNTRGMALFADGGIVGTKPYAASGSYINKMSDYCSGCHYKIKERSGALACPFNSFYWRFMDKHR
ARLSQNPRIGMLYQTWDKMDESARHAILATAEHNLVHLNRL

Sequences:

>Translated_521_residues
MQLQQFQTVRLILGDQLNAQHSWFNRVDDQVLYVIAELHQENTYVTHHVQKICAFFAAMAQFAKELRAQGHQVLYLTLDD
TFNNTQGYSDLLGLIQHQVTLVGAIKFEYQRPDEYRLLEQLSQLKLNTAVVNCVDTEHFILPFDEIDAQFPVGKHIMMEH
FYRRMRKRFNILMQEGKPLGGQWNFDASNRQKLKTQDIKVLPEPLMFSFDVTEILARLERHQIPTMGRIDAPLLWPINRA
QSLTLLTYFCQVCLPSFGRFQDAMTAQHPAKWSLYHSRLSFSLNSKLISPLEVINAAIDSYQTNAEIDIAQIEGFVRQIL
GWREYVRGIYWANMPQYASTNALNAHGTLPDYFWHGDTKMNCMRQALSQSLDFAYAHHIQRLMVIGNFCLLTEIEPNQVD
EWYLGVYVDAIEWVEMPNTRGMALFADGGIVGTKPYAASGSYINKMSDYCSGCHYKIKERSGALACPFNSFYWRFMDKHR
ARLSQNPRIGMLYQTWDKMDESARHAILATAEHNLVHLNRL
>Mature_521_residues
MQLQQFQTVRLILGDQLNAQHSWFNRVDDQVLYVIAELHQENTYVTHHVQKICAFFAAMAQFAKELRAQGHQVLYLTLDD
TFNNTQGYSDLLGLIQHQVTLVGAIKFEYQRPDEYRLLEQLSQLKLNTAVVNCVDTEHFILPFDEIDAQFPVGKHIMMEH
FYRRMRKRFNILMQEGKPLGGQWNFDASNRQKLKTQDIKVLPEPLMFSFDVTEILARLERHQIPTMGRIDAPLLWPINRA
QSLTLLTYFCQVCLPSFGRFQDAMTAQHPAKWSLYHSRLSFSLNSKLISPLEVINAAIDSYQTNAEIDIAQIEGFVRQIL
GWREYVRGIYWANMPQYASTNALNAHGTLPDYFWHGDTKMNCMRQALSQSLDFAYAHHIQRLMVIGNFCLLTEIEPNQVD
EWYLGVYVDAIEWVEMPNTRGMALFADGGIVGTKPYAASGSYINKMSDYCSGCHYKIKERSGALACPFNSFYWRFMDKHR
ARLSQNPRIGMLYQTWDKMDESARHAILATAEHNLVHLNRL

Specific function: Unknown

COG id: COG3046

COG function: function code R; Uncharacterized protein related to deoxyribodipyrimidine photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60386; Mature: 60386

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLQQFQTVRLILGDQLNAQHSWFNRVDDQVLYVIAELHQENTYVTHHVQKICAFFAAMA
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QFAKELRAQGHQVLYLTLDDTFNNTQGYSDLLGLIQHQVTLVGAIKFEYQRPDEYRLLEQ
HHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHH
LSQLKLNTAVVNCVDTEHFILPFDEIDAQFPVGKHIMMEHFYRRMRKRFNILMQEGKPLG
HHHHHHHHHEEEEECCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
GQWNFDASNRQKLKTQDIKVLPEPLMFSFDVTEILARLERHQIPTMGRIDAPLLWPINRA
CCCCCCCCCCCHHCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCEECCCCCC
QSLTLLTYFCQVCLPSFGRFQDAMTAQHPAKWSLYHSRLSFSLNSKLISPLEVINAAIDS
CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
YQTNAEIDIAQIEGFVRQILGWREYVRGIYWANMPQYASTNALNAHGTLPDYFWHGDTKM
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCHH
NCMRQALSQSLDFAYAHHIQRLMVIGNFCLLTEIEPNQVDEWYLGVYVDAIEWVEMPNTR
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCC
GMALFADGGIVGTKPYAASGSYINKMSDYCSGCHYKIKERSGALACPFNSFYWRFMDKHR
CEEEEECCCEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEECCHHHHHHHHHHHHH
ARLSQNPRIGMLYQTWDKMDESARHAILATAEHNLVHLNRL
HHHCCCCCEEEHHHHHHHHHHHHHHEEEEECCCCEEEECCC
>Mature Secondary Structure
MQLQQFQTVRLILGDQLNAQHSWFNRVDDQVLYVIAELHQENTYVTHHVQKICAFFAAMA
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QFAKELRAQGHQVLYLTLDDTFNNTQGYSDLLGLIQHQVTLVGAIKFEYQRPDEYRLLEQ
HHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHH
LSQLKLNTAVVNCVDTEHFILPFDEIDAQFPVGKHIMMEHFYRRMRKRFNILMQEGKPLG
HHHHHHHHHEEEEECCCCEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
GQWNFDASNRQKLKTQDIKVLPEPLMFSFDVTEILARLERHQIPTMGRIDAPLLWPINRA
CCCCCCCCCCCHHCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCEECCCCCC
QSLTLLTYFCQVCLPSFGRFQDAMTAQHPAKWSLYHSRLSFSLNSKLISPLEVINAAIDS
CHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
YQTNAEIDIAQIEGFVRQILGWREYVRGIYWANMPQYASTNALNAHGTLPDYFWHGDTKM
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCHH
NCMRQALSQSLDFAYAHHIQRLMVIGNFCLLTEIEPNQVDEWYLGVYVDAIEWVEMPNTR
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCC
GMALFADGGIVGTKPYAASGSYINKMSDYCSGCHYKIKERSGALACPFNSFYWRFMDKHR
CEEEEECCCEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEECCHHHHHHHHHHHHH
ARLSQNPRIGMLYQTWDKMDESARHAILATAEHNLVHLNRL
HHHCCCCCEEEHHHHHHHHHHHHHHEEEEECCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA