| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176049
Identifier: 126176049
GI number: 126176049
Start: 4532825
End: 4533598
Strand: Direct
Name: 126176049
Synonym: Sbal_3858
Alternate gene names: NA
Gene position: 4532825-4533598 (Clockwise)
Preceding gene: 126176048
Following gene: 126176050
Centisome position: 88.4
GC content: 47.67
Gene sequence:
>774_bases ATGAGGCTGATACTGATAATCGTCATTTCATGCTTATTTCTGCCCCAAGCGAGAGCAGAAACCTCTGCTGTTGTCTGGCA AGCACACTGCCGCGATAGGCATCCTGTTATTTATGTCGAAAAGGGTGAGTGCAAAGGCCCAGGTGCAGCTGTCATCAATG AAGTCATCGCCCGCCTAGGTCACAAGGTAAATTGGAGTAATGTGCCTTGGGCACGCACGATTAAAGTCGCCGAAACGGGG CTAGTCGACCTCATTCCCGTCCATTCGATGACACCCGAGCGCAACGATTTTCTGGACCCTATGCTACTGGGCTACGACAA GCGCTACGTCTATTACTTTGCCCTTGCGAATCGACAGCTTGAGGTCAAAAAATTCGATGAATTAAAGCCTTATATCATTG GCGCACTCAGAGGCGCTTTTTACTGTCCGCAGTTTAATGACAATCAAAACCAACTAAAAGTGTCTTTTGTTAATGATAAC GGCCAGTTAATCAATATGTTGAAGGTAGAGCGTATCGATTTAGCCATCACCTCCGAACAACATGAGATGCAATTCTTTGC TAAAGATCCCCAGCTTAAGCAGATGGAATACGTCGACATCAGCAAGAACGGCCGCTATTTCAGCATTCCGCTCATGTCGC CGCTGCATCAATATGCCAAGCAAGTTCACCAGATAGTCGACGACATGCGCACCTCAGGCGAAATCACTCGGCTATTTGAA TCCTATGGTGTCGAGCCTCCGCTAAATCTCACCGAATCGCCCACCACTCAATAA
Upstream 100 bases:
>100_bases AAACCTGTACGGCTAAATGACTAGACATAAAACCTAGTCGGATTAACTGTCCAGCCCGATACCCGATAATTAAAACTGAC CATTTTAATAGGCAAGATGA
Downstream 100 bases:
>100_bases TCTGATTTCTGTTTAGCCAAAGTGTGACCCAATGAAAAATAAACAGCCTTAACTAGCCCGCTCCCTGCAATATTCGTTGA GATCTTAGTGTTTCACTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MRLILIIVISCLFLPQARAETSAVVWQAHCRDRHPVIYVEKGECKGPGAAVINEVIARLGHKVNWSNVPWARTIKVAETG LVDLIPVHSMTPERNDFLDPMLLGYDKRYVYYFALANRQLEVKKFDELKPYIIGALRGAFYCPQFNDNQNQLKVSFVNDN GQLINMLKVERIDLAITSEQHEMQFFAKDPQLKQMEYVDISKNGRYFSIPLMSPLHQYAKQVHQIVDDMRTSGEITRLFE SYGVEPPLNLTESPTTQ
Sequences:
>Translated_257_residues MRLILIIVISCLFLPQARAETSAVVWQAHCRDRHPVIYVEKGECKGPGAAVINEVIARLGHKVNWSNVPWARTIKVAETG LVDLIPVHSMTPERNDFLDPMLLGYDKRYVYYFALANRQLEVKKFDELKPYIIGALRGAFYCPQFNDNQNQLKVSFVNDN GQLINMLKVERIDLAITSEQHEMQFFAKDPQLKQMEYVDISKNGRYFSIPLMSPLHQYAKQVHQIVDDMRTSGEITRLFE SYGVEPPLNLTESPTTQ >Mature_257_residues MRLILIIVISCLFLPQARAETSAVVWQAHCRDRHPVIYVEKGECKGPGAAVINEVIARLGHKVNWSNVPWARTIKVAETG LVDLIPVHSMTPERNDFLDPMLLGYDKRYVYYFALANRQLEVKKFDELKPYIIGALRGAFYCPQFNDNQNQLKVSFVNDN GQLINMLKVERIDLAITSEQHEMQFFAKDPQLKQMEYVDISKNGRYFSIPLMSPLHQYAKQVHQIVDDMRTSGEITRLFE SYGVEPPLNLTESPTTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29530; Mature: 29530
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLILIIVISCLFLPQARAETSAVVWQAHCRDRHPVIYVEKGECKGPGAAVINEVIARLG CHHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC HKVNWSNVPWARTIKVAETGLVDLIPVHSMTPERNDFLDPMLLGYDKRYVYYFALANRQL CCCCCCCCCHHEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCEE EVKKFDELKPYIIGALRGAFYCPQFNDNQNQLKVSFVNDNGQLINMLKVERIDLAITSEQ EEHHHHCCCHHHHHHHHHCEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEECCH HEMQFFAKDPQLKQMEYVDISKNGRYFSIPLMSPLHQYAKQVHQIVDDMRTSGEITRLFE HHHHEEECCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SYGVEPPLNLTESPTTQ HHCCCCCCCCCCCCCCC >Mature Secondary Structure MRLILIIVISCLFLPQARAETSAVVWQAHCRDRHPVIYVEKGECKGPGAAVINEVIARLG CHHHHHHHHHHHHCCCCCCCCHHEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHC HKVNWSNVPWARTIKVAETGLVDLIPVHSMTPERNDFLDPMLLGYDKRYVYYFALANRQL CCCCCCCCCHHEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCEEEEEEEECCEE EVKKFDELKPYIIGALRGAFYCPQFNDNQNQLKVSFVNDNGQLINMLKVERIDLAITSEQ EEHHHHCCCHHHHHHHHHCEECCCCCCCCCEEEEEEECCCCCEEEEEEEEEEEEEEECCH HEMQFFAKDPQLKQMEYVDISKNGRYFSIPLMSPLHQYAKQVHQIVDDMRTSGEITRLFE HHHHEEECCCCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SYGVEPPLNLTESPTTQ HHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA