| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176041
Identifier: 126176041
GI number: 126176041
Start: 4524639
End: 4525109
Strand: Reverse
Name: 126176041
Synonym: Sbal_3850
Alternate gene names: NA
Gene position: 4525109-4524639 (Counterclockwise)
Preceding gene: 126176043
Following gene: 126176040
Centisome position: 88.25
GC content: 49.04
Gene sequence:
>471_bases ATGGAGTTTTCAAATCCGATTTTAGTGTGGGCTGTGGTGGGGCTAGTATTCATGCTCGCCGAAATAGTGGTTCCCGGTGG CATCATAGTGTTGCTGGGTGCGGCTTGTTTAGTCGTGGCTGGCGCGTTAGCCATAGGACTAGTCGAAGGCTTAGTGCAGA GCATGACCCTGTGGTTTATCTCGGCCATTGTGCTGTTATTGACCTTCAGACAAGTGACTCAAAGGCTCGTTGGTGGTGAT TCCCATGTGGATAACACGGATGAAGCAATCGATCTATACAATCAAATTGTTCGCGTAAAGCAGACCATAGGTCCTGGGCA AACACCCGGGCGGGTGGAATTTCAAGGTAGTGAATGGCCAGCGCTTGGCGATGGCACCACTATCGCTGCGGGGACCGAAG TCAGAATTATTTGTCGTGAAAATATCGCTCTAGTCGTTGAGCCTATTTCAATAGAAGCTTCCAAAAACTAA
Upstream 100 bases:
>100_bases ATTGCGCATTCGGCTTAGTAAATTTTGACATATTATGTCGCTTATCCGAAACGCTGCTGTTATAGTTGCTGCAAAGGACA CTCTCATTTCAGGAGGAAAT
Downstream 100 bases:
>100_bases AGGATGGAATCTATGTTTGTATTTACCTTAGTCATTTTATTTATCTTTTTTATTCTCTATAAGTTGATGCTTATCGTGCC GATGCGTGAAGTGCATGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MEFSNPILVWAVVGLVFMLAEIVVPGGIIVLLGAACLVVAGALAIGLVEGLVQSMTLWFISAIVLLLTFRQVTQRLVGGD SHVDNTDEAIDLYNQIVRVKQTIGPGQTPGRVEFQGSEWPALGDGTTIAAGTEVRIICRENIALVVEPISIEASKN
Sequences:
>Translated_156_residues MEFSNPILVWAVVGLVFMLAEIVVPGGIIVLLGAACLVVAGALAIGLVEGLVQSMTLWFISAIVLLLTFRQVTQRLVGGD SHVDNTDEAIDLYNQIVRVKQTIGPGQTPGRVEFQGSEWPALGDGTTIAAGTEVRIICRENIALVVEPISIEASKN >Mature_156_residues MEFSNPILVWAVVGLVFMLAEIVVPGGIIVLLGAACLVVAGALAIGLVEGLVQSMTLWFISAIVLLLTFRQVTQRLVGGD SHVDNTDEAIDLYNQIVRVKQTIGPGQTPGRVEFQGSEWPALGDGTTIAAGTEVRIICRENIALVVEPISIEASKN
Specific function: Unknown
COG id: COG1585
COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16567; Mature: 16567
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFSNPILVWAVVGLVFMLAEIVVPGGIIVLLGAACLVVAGALAIGLVEGLVQSMTLWFI CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIVLLLTFRQVTQRLVGGDSHVDNTDEAIDLYNQIVRVKQTIGPGQTPGRVEFQGSEWP HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC ALGDGTTIAAGTEVRIICRENIALVVEPISIEASKN CCCCCCEEECCCEEEEEEECCEEEEEEEEEECCCCC >Mature Secondary Structure MEFSNPILVWAVVGLVFMLAEIVVPGGIIVLLGAACLVVAGALAIGLVEGLVQSMTLWFI CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIVLLLTFRQVTQRLVGGDSHVDNTDEAIDLYNQIVRVKQTIGPGQTPGRVEFQGSEWP HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC ALGDGTTIAAGTEVRIICRENIALVVEPISIEASKN CCCCCCEEECCCEEEEEEECCEEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA