| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126176018
Identifier: 126176018
GI number: 126176018
Start: 4499549
End: 4500037
Strand: Reverse
Name: 126176018
Synonym: Sbal_3827
Alternate gene names: NA
Gene position: 4500037-4499549 (Counterclockwise)
Preceding gene: 126176019
Following gene: 126176017
Centisome position: 87.76
GC content: 44.17
Gene sequence:
>489_bases ATGCTTAACTTATCTATGTCAAAACAGGCCGGATTTACCTTAGTCGAATTAGTGACGACCATCATCTTGATTTCAATTCT TGCTGTGGTTGTACTGCCTCGCCTGTTTACCCAGTCTTCCTACAGTGCTTATAGCCTACGTAACGAGTTCATTAGCGAGC TGCGTCAAGTACAGCAAAAAGCGCTCAATAATACCGACAGGTGTTTTCGTGTAACTGTTTCTGTCACTGGTTATCAAGTG AGTCAATTCTCTGCCCGAAATGGGGCAGCTTGTTCTGGCACTGCGTTATCGCCAAACCCGCTTTATAGCCAGGCTTTTCA AGGTAGTGCTCAATTAGTGCTAGTGAGCACTAACAGCAGCAACTTCACCCTCGATTTCGATATCAACGGTAGACTTTCGT TGGCTTGTAATGGGCCATGCATTAATGTGATTGCTAATGACACTGTGATGATTAACGTCTCCAGCGAGGGTTATATTTAT GCCAACTAA
Upstream 100 bases:
>100_bases AAAAATGAGTCCGCCAAGAATTTACCGACATTTATTTGCGTTAATCATACCGTTGGCAGAAACTGAACTTAGCACTTGAA ATCAGCAATTAACCCGAGCG
Downstream 100 bases:
>100_bases TGCTCTCTTTAAAGGACATATTCAAGCCCGTCAATTAGGTTTTACCCTTATCGAATTAGTCATTGGTATGTTGGTGATTG GCATTGCGATAGTGATGCTA
Product: methylation site containing protein
Products: NA
Alternate protein names: Methylation Site Containing Protein; Methylation
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MLNLSMSKQAGFTLVELVTTIILISILAVVVLPRLFTQSSYSAYSLRNEFISELRQVQQKALNNTDRCFRVTVSVTGYQV SQFSARNGAACSGTALSPNPLYSQAFQGSAQLVLVSTNSSNFTLDFDINGRLSLACNGPCINVIANDTVMINVSSEGYIY AN
Sequences:
>Translated_162_residues MLNLSMSKQAGFTLVELVTTIILISILAVVVLPRLFTQSSYSAYSLRNEFISELRQVQQKALNNTDRCFRVTVSVTGYQV SQFSARNGAACSGTALSPNPLYSQAFQGSAQLVLVSTNSSNFTLDFDINGRLSLACNGPCINVIANDTVMINVSSEGYIY AN >Mature_162_residues MLNLSMSKQAGFTLVELVTTIILISILAVVVLPRLFTQSSYSAYSLRNEFISELRQVQQKALNNTDRCFRVTVSVTGYQV SQFSARNGAACSGTALSPNPLYSQAFQGSAQLVLVSTNSSNFTLDFDINGRLSLACNGPCINVIANDTVMINVSSEGYIY AN
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17551; Mature: 17551
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLSMSKQAGFTLVELVTTIILISILAVVVLPRLFTQSSYSAYSLRNEFISELRQVQQK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH ALNNTDRCFRVTVSVTGYQVSQFSARNGAACSGTALSPNPLYSQAFQGSAQLVLVSTNSS HCCCCCCEEEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCC NFTLDFDINGRLSLACNGPCINVIANDTVMINVSSEGYIYAN CEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCEEEEC >Mature Secondary Structure MLNLSMSKQAGFTLVELVTTIILISILAVVVLPRLFTQSSYSAYSLRNEFISELRQVQQK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH ALNNTDRCFRVTVSVTGYQVSQFSARNGAACSGTALSPNPLYSQAFQGSAQLVLVSTNSS HCCCCCCEEEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCC NFTLDFDINGRLSLACNGPCINVIANDTVMINVSSEGYIYAN CEEEEEECCCEEEEEECCCEEEEEECCEEEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA