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The map label for this gene is rng [H]

Identifier: 126176009

GI number: 126176009

Start: 4487860

End: 4489368

Strand: Reverse

Name: rng [H]

Synonym: Sbal_3818

Alternate gene names: 126176009

Gene position: 4489368-4487860 (Counterclockwise)

Preceding gene: 126176010

Following gene: 126176008

Centisome position: 87.56

GC content: 48.05

Gene sequence:

>1509_bases
GTGAATACCAGTCGCTTAAATCCAAATAAAATACAGCGCAAGATGGGTTCAGAATTACTGATCAACGTAACCCCCTCTGA
GGCGCGCGTAGCCTTAGTTGAGCATGGCGTGCTGCAAGAAGTACACATTGAACGCCGCATGAAACGGGGTTTAGTTGGCA
ATATTTACAAAGGTAAAATCAGCCGTGTGTTGCCCGGTATGCAAGCCGCCTTTGTCGATATTGGCTTAGATAAAGCCGCT
TTTCTACATGCTTCCGACATAGTGCCGCACACTGAATGCGTTGCCGATGTTGAGAAAGGTCATTTCGTTGTCCGTGATAT
CGCCGAATTAGTCCGTCAAGGACAAGACATTATGGTGCAAGTGGTTAAAGATCCGCTGGGCACTAAGGGCGCACGCCTGA
CTACCGATATCACTTTGCCTTCCCGTTATTTAGTCTTTATGCCTGGCTCTAGTCACGTTGGCGTTTCCCAGCGTATCGAG
CTTGAAGAAGAACGCAGTCGCCTTAAACAAATCACTTTGCCCTATGTCGATGATGACGGTGGTTTTATTATCCGCACTGC
TGCTGAAGGCGTGGGTGAGGATGAGTTATCCCAAGATGCGGCGTTTTTAAGGCGTGTTTGGTCAAAGGTCAGTGAGCGAC
GTAAGCGCAGTGGCGTGTCTTTGTTATATCAAGATTTAGCCTTACCAGTGCGGATTGTGCGTGATTTTGTTGGCACTGAG
CTTGACCGTATTCAGGTTGATTCTCGCCGTACCTTTGCCGAGTTGCAGTCTTTTGCCCAAGAGTTTATGCCTGAGATTGC
CGAGAAGATTGAGCATTATTCAGGGCCTGCGCCTATTTTCGATCTCTACGATGTGGAGAACGAAATTCAACGCGCGCTTG
GTCGTAAGGTTGAGCTCAAGTCTGGCGGCTATTTGATTATCGATCAGACCGAAGCCATGACGACTGTGGATATCAATACC
GGCGCCTTTGTTGGGCACAGAAATCTTGAAGAAACCATTTTCAATACCAATCTCGAAGCGACCCAAGCGATAGCAAGGCA
GTTACGTCTGCGTAATCTCGGCGGCATCATTATTATCGATTTTATCGACATGATGACGGCGGATCATAAGGCTCGGGTGC
TCAGCAGCTTAACCAGTGCCTTATCTAAAGACAGAGTGAAAACCAATGTAAGTGGTTTCTCTGGCTTAGGTTTAGTTGAA
ATGACCCGTAAACGAACTCGTGAGAGCTTAGAGCACGTGGTTTGCGGCGAATGCCCCGCCTGCCATGGCACGGGCAGCAT
GAAGACTGTTGAGACCGTTTCCTACGAGGTGTTTCGCGAAATCATCCGCTTAAACCGCGCCTATGATGCCGATGAGTTCC
TGTTGTACTGTTCGCCAGCCGTGTATCAAAGCCTGCATACCGATGAAAATCATCTGATTGCTGAACTTGAGGTTTACATA
GGTAAGCGTATCCGTTTGCAAAATGAGCCTATGTACTCACAGCACAAATACGATGTGGTGATGATGTAG

Upstream 100 bases:

>100_bases
CTTAGCCTTGATCCTTTATTCGGTTTTCATGCTTAGATAGTTGGTAACTTCTAGTTTGTAACTTCGATTAATTAATCTAG
TTTCCCGAATGGGGTGAGTC

Downstream 100 bases:

>100_bases
TGGCGGCACCTTTTACTGCAAAAAAACTAAGTCGTTTTTGTTGGCAATTTATCGCGCTAATCTTAGTGCTATTTGCGCTT
GCAGTGAGTTTGATCCGTGG

Product: ribonuclease G

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MNTSRLNPNKIQRKMGSELLINVTPSEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKISRVLPGMQAAFVDIGLDKAA
FLHASDIVPHTECVADVEKGHFVVRDIAELVRQGQDIMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGSSHVGVSQRIE
LEEERSRLKQITLPYVDDDGGFIIRTAAEGVGEDELSQDAAFLRRVWSKVSERRKRSGVSLLYQDLALPVRIVRDFVGTE
LDRIQVDSRRTFAELQSFAQEFMPEIAEKIEHYSGPAPIFDLYDVENEIQRALGRKVELKSGGYLIIDQTEAMTTVDINT
GAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIIDFIDMMTADHKARVLSSLTSALSKDRVKTNVSGFSGLGLVE
MTRKRTRESLEHVVCGECPACHGTGSMKTVETVSYEVFREIIRLNRAYDADEFLLYCSPAVYQSLHTDENHLIAELEVYI
GKRIRLQNEPMYSQHKYDVVMM

Sequences:

>Translated_502_residues
MNTSRLNPNKIQRKMGSELLINVTPSEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKISRVLPGMQAAFVDIGLDKAA
FLHASDIVPHTECVADVEKGHFVVRDIAELVRQGQDIMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGSSHVGVSQRIE
LEEERSRLKQITLPYVDDDGGFIIRTAAEGVGEDELSQDAAFLRRVWSKVSERRKRSGVSLLYQDLALPVRIVRDFVGTE
LDRIQVDSRRTFAELQSFAQEFMPEIAEKIEHYSGPAPIFDLYDVENEIQRALGRKVELKSGGYLIIDQTEAMTTVDINT
GAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIIDFIDMMTADHKARVLSSLTSALSKDRVKTNVSGFSGLGLVE
MTRKRTRESLEHVVCGECPACHGTGSMKTVETVSYEVFREIIRLNRAYDADEFLLYCSPAVYQSLHTDENHLIAELEVYI
GKRIRLQNEPMYSQHKYDVVMM
>Mature_502_residues
MNTSRLNPNKIQRKMGSELLINVTPSEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKISRVLPGMQAAFVDIGLDKAA
FLHASDIVPHTECVADVEKGHFVVRDIAELVRQGQDIMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGSSHVGVSQRIE
LEEERSRLKQITLPYVDDDGGFIIRTAAEGVGEDELSQDAAFLRRVWSKVSERRKRSGVSLLYQDLALPVRIVRDFVGTE
LDRIQVDSRRTFAELQSFAQEFMPEIAEKIEHYSGPAPIFDLYDVENEIQRALGRKVELKSGGYLIIDQTEAMTTVDINT
GAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIIDFIDMMTADHKARVLSSLTSALSKDRVKTNVSGFSGLGLVE
MTRKRTRESLEHVVCGECPACHGTGSMKTVETVSYEVFREIIRLNRAYDADEFLLYCSPAVYQSLHTDENHLIAELEVYI
GKRIRLQNEPMYSQHKYDVVMM

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=489, Percent_Identity=72.3926380368098, Blast_Score=726, Evalue=0.0,
Organism=Escherichia coli, GI1787325, Length=427, Percent_Identity=38.4074941451991, Blast_Score=268, Evalue=7e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 56535; Mature: 56535

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSRLNPNKIQRKMGSELLINVTPSEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKI
CCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SRVLPGMQAAFVDIGLDKAAFLHASDIVPHTECVADVEKGHFVVRDIAELVRQGQDIMVQ
HHHCCCHHHHHHCCCCCHHHHEEHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH
VVKDPLGTKGARLTTDITLPSRYLVFMPGSSHVGVSQRIELEEERSRLKQITLPYVDDDG
HHHCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHCCCHHHHHHHHEEECCEEECCC
GFIIRTAAEGVGEDELSQDAAFLRRVWSKVSERRKRSGVSLLYQDLALPVRIVRDFVGTE
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
LDRIQVDSRRTFAELQSFAQEFMPEIAEKIEHYSGPAPIFDLYDVENEIQRALGRKVELK
HHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCEEEEC
SGGYLIIDQTEAMTTVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIID
CCCEEEEECCCCEEEEECCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEE
FIDMMTADHKARVLSSLTSALSKDRVKTNVSGFSGLGLVEMTRKRTRESLEHVVCGECPA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
CHGTGSMKTVETVSYEVFREIIRLNRAYDADEFLLYCSPAVYQSLHTDENHLIAELEVYI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHCCCCCHHHHHHHHHH
GKRIRLQNEPMYSQHKYDVVMM
CCEEEECCCCCCCCCCEEEEEC
>Mature Secondary Structure
MNTSRLNPNKIQRKMGSELLINVTPSEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKI
CCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SRVLPGMQAAFVDIGLDKAAFLHASDIVPHTECVADVEKGHFVVRDIAELVRQGQDIMVQ
HHHCCCHHHHHHCCCCCHHHHEEHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH
VVKDPLGTKGARLTTDITLPSRYLVFMPGSSHVGVSQRIELEEERSRLKQITLPYVDDDG
HHHCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHCCCHHHHHHHHEEECCEEECCC
GFIIRTAAEGVGEDELSQDAAFLRRVWSKVSERRKRSGVSLLYQDLALPVRIVRDFVGTE
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
LDRIQVDSRRTFAELQSFAQEFMPEIAEKIEHYSGPAPIFDLYDVENEIQRALGRKVELK
HHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCEEEEC
SGGYLIIDQTEAMTTVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIID
CCCEEEEECCCCEEEEECCCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEE
FIDMMTADHKARVLSSLTSALSKDRVKTNVSGFSGLGLVEMTRKRTRESLEHVVCGECPA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
CHGTGSMKTVETVSYEVFREIIRLNRAYDADEFLLYCSPAVYQSLHTDENHLIAELEVYI
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHCCCCCHHHHHHHHHH
GKRIRLQNEPMYSQHKYDVVMM
CCEEEECCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]