| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175960
Identifier: 126175960
GI number: 126175960
Start: 4421240
End: 4421569
Strand: Reverse
Name: 126175960
Synonym: Sbal_3766
Alternate gene names: NA
Gene position: 4421569-4421240 (Counterclockwise)
Preceding gene: 126175961
Following gene: 126175959
Centisome position: 86.23
GC content: 49.39
Gene sequence:
>330_bases GTGTCTAAGCCATCGGAACAACCTAAGTTAGAAGCTGCGCAAATTTGCCCTCTATGCCAAGGCGCGAATCAATGTGCGGT GATTGTTGGTAAGGGCATTGAGGATTGTTGGTGTGCGCAGCAGGTGTTTCCGACTTTGGCTGCCTTGCAAGCGCAAGCAT CAGATTCGCTACAAGGTGCAATCAGCCCCATTTTACCGTCTGCCGATGCGTGTATTTGCCAAACCTGTCTTAGCCAACTC AAGCAGAATTTAAGTCAGGGGCAGATTACAACGCAGGATGAAAAAAGCCCATCGAGTGTGAGCGATGGGCTAGGTTATGA GGTGAAATAG
Upstream 100 bases:
>100_bases CATTGAATAATCTATCTCGCGCTTATTGAAAAACCATTATGATCTCCGCGCTATAACAACTTATCTTGCTATAACAACTT ATCTTGCAATAAGGATTACC
Downstream 100 bases:
>100_bases CGGGCTGAAGTAATGAGCTATCGATTTATGGTGTAATCCAGTTGCACGCTAGTTTGTGCTTCCACGGCTATTGCGCGACA ATTACCCTGACCGGTTCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MSKPSEQPKLEAAQICPLCQGANQCAVIVGKGIEDCWCAQQVFPTLAALQAQASDSLQGAISPILPSADACICQTCLSQL KQNLSQGQITTQDEKSPSSVSDGLGYEVK
Sequences:
>Translated_109_residues MSKPSEQPKLEAAQICPLCQGANQCAVIVGKGIEDCWCAQQVFPTLAALQAQASDSLQGAISPILPSADACICQTCLSQL KQNLSQGQITTQDEKSPSSVSDGLGYEVK >Mature_108_residues SKPSEQPKLEAAQICPLCQGANQCAVIVGKGIEDCWCAQQVFPTLAALQAQASDSLQGAISPILPSADACICQTCLSQLK QNLSQGQITTQDEKSPSSVSDGLGYEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11412; Mature: 11281
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPSEQPKLEAAQICPLCQGANQCAVIVGKGIEDCWCAQQVFPTLAALQAQASDSLQGA CCCCCCCCCCCHHHHCHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISPILPSADACICQTCLSQLKQNLSQGQITTQDEKSPSSVSDGLGYEVK HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCC >Mature Secondary Structure SKPSEQPKLEAAQICPLCQGANQCAVIVGKGIEDCWCAQQVFPTLAALQAQASDSLQGA CCCCCCCCCCHHHHCHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ISPILPSADACICQTCLSQLKQNLSQGQITTQDEKSPSSVSDGLGYEVK HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA