| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175956
Identifier: 126175956
GI number: 126175956
Start: 4416653
End: 4417456
Strand: Direct
Name: 126175956
Synonym: Sbal_3762
Alternate gene names: NA
Gene position: 4416653-4417456 (Clockwise)
Preceding gene: 126175953
Following gene: 126175957
Centisome position: 86.14
GC content: 52.74
Gene sequence:
>804_bases ATGTCATCTACCGCCACGCTCGAACCAGTTCAAATGCAGATTCATGCCGCAGCAAAGGAACTCGCCGAGCGCCGCGCCGC AGGCACCTGCGGCGATTTACTGCTCCCAGAGCTGAGGCCAACGAGCTTCGAACAGGCCTTCGCCATTCAGCAAACCGTGG CTGCAATCTATAAGGCTAACAACAATCCTATCACGGCGTGGAAATGCCTATTACCCTCGGCGGAAAAAACCGTCGTAGCG CCTATTTATCAAGCTGATGTGTATCAACAATCGGCCACTTGCCCACTCTATCCATCGACTAAAGATCTGGCCCGCGTCGA ACCTGAACTCGCCTTCGAGATTGCTCGCGATTTACCGCCAAGAACCACGCCTTACACAGAGGCTGAAATCGACGCGGCCT TAGGCCACACTCGCTTAGCCTTGGAATTGATCAAAAGCCGCTACCATACGCCCAGTGAAGCGACGCATTTCGATGCCCTC GCCGATGGCTTAGTCAATCAAGGATTATGGTTAGGGCCAGTGCTAAACCCGCTAGCCGGTTTAGAGACCAGCCATTTCGA ACTCTGCGTTAACATTAAGGATGGCGCAACACTGCAAAAATCCGCCATTCATCCCAACGGTTTCCCTAAGGCGGGACTCT ACTGGTTAGTTAACTTTTTATCCGCCCAAGGCATTGACTTAACTCAAGGGCAATATGTGATCACAGGCTCCTACGCGGGC GTCCTCGATCTACCATTGGCGCAAGTTTGTGACTTTGAATACGGCGCACTCGGGCAATTTGCCGTGACTTTCACTGCGAA GTGA
Upstream 100 bases:
>100_bases GCCATGGCAATAACCGAGTATATTTAGCCGATTAAATGGCTTCTCTGCCACAGTTTCTACGCCACGTCTTTCTAGGCTCA CTCTTTAAATAGGAAAGTTA
Downstream 100 bases:
>100_bases TGGTGGCGAGTAAAAGCACTTGCGGCTAATAGAAGTCATAACGGCTAATAAAGCGATAAAACACTGATAAATAAGCGAAC TCTATTTCAACTGGGCTCGC
Product: hydratase/decarboxylase family protein
Products: NA
Alternate protein names: 2-Keto-4-Pentenoate Hydratase-Like Protein; 2-Keto-4-Pentenoate Hydratase; Hydratase/Decarboxylase; Hydratase; 2-Keto-4-Pentenoate Hydratase-Like; Hydratase/Decarboxylase Family
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSSTATLEPVQMQIHAAAKELAERRAAGTCGDLLLPELRPTSFEQAFAIQQTVAAIYKANNNPITAWKCLLPSAEKTVVA PIYQADVYQQSATCPLYPSTKDLARVEPELAFEIARDLPPRTTPYTEAEIDAALGHTRLALELIKSRYHTPSEATHFDAL ADGLVNQGLWLGPVLNPLAGLETSHFELCVNIKDGATLQKSAIHPNGFPKAGLYWLVNFLSAQGIDLTQGQYVITGSYAG VLDLPLAQVCDFEYGALGQFAVTFTAK
Sequences:
>Translated_267_residues MSSTATLEPVQMQIHAAAKELAERRAAGTCGDLLLPELRPTSFEQAFAIQQTVAAIYKANNNPITAWKCLLPSAEKTVVA PIYQADVYQQSATCPLYPSTKDLARVEPELAFEIARDLPPRTTPYTEAEIDAALGHTRLALELIKSRYHTPSEATHFDAL ADGLVNQGLWLGPVLNPLAGLETSHFELCVNIKDGATLQKSAIHPNGFPKAGLYWLVNFLSAQGIDLTQGQYVITGSYAG VLDLPLAQVCDFEYGALGQFAVTFTAK >Mature_266_residues SSTATLEPVQMQIHAAAKELAERRAAGTCGDLLLPELRPTSFEQAFAIQQTVAAIYKANNNPITAWKCLLPSAEKTVVAP IYQADVYQQSATCPLYPSTKDLARVEPELAFEIARDLPPRTTPYTEAEIDAALGHTRLALELIKSRYHTPSEATHFDALA DGLVNQGLWLGPVLNPLAGLETSHFELCVNIKDGATLQKSAIHPNGFPKAGLYWLVNFLSAQGIDLTQGQYVITGSYAGV LDLPLAQVCDFEYGALGQFAVTFTAK
Specific function: Unknown
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28918; Mature: 28787
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTATLEPVQMQIHAAAKELAERRAAGTCGDLLLPELRPTSFEQAFAIQQTVAAIYKAN CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC NNPITAWKCLLPSAEKTVVAPIYQADVYQQSATCPLYPSTKDLARVEPELAFEIARDLPP CCCEEEEEEECCCCCCEEEEHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCC RTTPYTEAEIDAALGHTRLALELIKSRYHTPSEATHFDALADGLVNQGLWLGPVLNPLAG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEHHHHHHHHHC LETSHFELCVNIKDGATLQKSAIHPNGFPKAGLYWLVNFLSAQGIDLTQGQYVITGSYAG CCCCCEEEEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCEEEEECCCC VLDLPLAQVCDFEYGALGQFAVTFTAK HHHCCHHHHHCCCCCCCCEEEEEEECC >Mature Secondary Structure SSTATLEPVQMQIHAAAKELAERRAAGTCGDLLLPELRPTSFEQAFAIQQTVAAIYKAN CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC NNPITAWKCLLPSAEKTVVAPIYQADVYQQSATCPLYPSTKDLARVEPELAFEIARDLPP CCCEEEEEEECCCCCCEEEEHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCC RTTPYTEAEIDAALGHTRLALELIKSRYHTPSEATHFDALADGLVNQGLWLGPVLNPLAG CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEHHHHHHHHHC LETSHFELCVNIKDGATLQKSAIHPNGFPKAGLYWLVNFLSAQGIDLTQGQYVITGSYAG CCCCCEEEEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCEEEEECCCC VLDLPLAQVCDFEYGALGQFAVTFTAK HHHCCHHHHHCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA