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The map label for this gene is 126175946

Identifier: 126175946

GI number: 126175946

Start: 4402989

End: 4404056

Strand: Direct

Name: 126175946

Synonym: Sbal_3752

Alternate gene names: NA

Gene position: 4402989-4404056 (Clockwise)

Preceding gene: 126175945

Following gene: 126175949

Centisome position: 85.87

GC content: 45.97

Gene sequence:

>1068_bases
ATGAAGCAGTTCAAACTAACATCAGCCGTGCTTGTGCTGAGCTTTGCCACACCTATCTTTGCTGTTCAAGCCAATGATAC
CGCTGCAACCAATGACGAGTTACGCACTGAGTTACAACAAATTCAGCAGAGACTCGCCATGCTCGAAGCCCAAGAAAAAG
AGGCGTCGGTTTTATCGGATACTCAGTTTAATTTTTATGGTTCTTTACGCCCGACTTTCGGCCTGACCCACACTAACTCG
GACGATGTGTGGGATGTGGGCGATGCGAACTCGCGAATTGGCTTTGCCGCAGAACACCAACTTGGCAATGGCTTAGTCGG
GTTTGCGAAAGGGGAATTTAAGGTCGATATCAAAGATGACGGCGACTTTGGCGATGCGCGCAAAGCTTATGTTGGATTAA
AAGGATTTTTTGGTAGCGTAGCCATAGGTAAACAAGCCGTTACCCAGGAAATCATTTCCGATCCCGTCGACATCTTTAAC
CGCTCAGGAACCCCACTCGCCTATGACAGTGCGAGCCCCTTCAGACTCAATAACCTAGTGACCTATCGTAAAGAATTTGG
CGACCTGTTATTTTCGGCCGATGCACAATTCGATGGCAACAAAGGCAGTGGCGGCAGTGACTTCGTTAACGCGGGTATCC
GTTATAAAACTGATTTAATCTATATAGCCGCGGCTTTTTATAACAAAGAGTTAGAAGACAACAAGGATGAAAATACATTC
GGTGTCACCCTAGCAAAAAGTTTCAATGACTTGTACCTCGCGGCTGCCTATCAAAATATTGAAAAAGACGATATCGATGG
AACCACATTGGATGGCTCAACATTAGATGTGGTCGCCAGCTACCCCATCACTGACAGCTATAAAATCAAGCTGGGCGTGT
CCAGATACGACGATGGTGGCAATGACATCACCTCTGCTAAATACAACGCCTATAACACTACGCTGGAGTGGCATAAAACA
CCGCAATTCAGCACCTTCATCGAATATCAAAAAACAGATTTTGAATACCGCGAAACCAATGACCAGTTCATGCTGGGCAT
GCGTTATAACTTCGATTACACGTTCTAG

Upstream 100 bases:

>100_bases
GCACTATCACAAGTGCAGATCCTTACTACTAGCAGTACTGTTCCATCGGCAACAAAATCCATTAACGGCACGCTAGTAGT
TGTTATGTAAGGAAACATAA

Downstream 100 bases:

>100_bases
GTTTTATCTCCAGCGTATAGTCATGTGAGTGAAGGGTTTAACGGTCTCACTGCATAAAGACTAAAAACATAAAGACCAGA
AACAACAAAGCCACGACTCG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKQFKLTSAVLVLSFATPIFAVQANDTAATNDELRTELQQIQQRLAMLEAQEKEASVLSDTQFNFYGSLRPTFGLTHTNS
DDVWDVGDANSRIGFAAEHQLGNGLVGFAKGEFKVDIKDDGDFGDARKAYVGLKGFFGSVAIGKQAVTQEIISDPVDIFN
RSGTPLAYDSASPFRLNNLVTYRKEFGDLLFSADAQFDGNKGSGGSDFVNAGIRYKTDLIYIAAAFYNKELEDNKDENTF
GVTLAKSFNDLYLAAAYQNIEKDDIDGTTLDGSTLDVVASYPITDSYKIKLGVSRYDDGGNDITSAKYNAYNTTLEWHKT
PQFSTFIEYQKTDFEYRETNDQFMLGMRYNFDYTF

Sequences:

>Translated_355_residues
MKQFKLTSAVLVLSFATPIFAVQANDTAATNDELRTELQQIQQRLAMLEAQEKEASVLSDTQFNFYGSLRPTFGLTHTNS
DDVWDVGDANSRIGFAAEHQLGNGLVGFAKGEFKVDIKDDGDFGDARKAYVGLKGFFGSVAIGKQAVTQEIISDPVDIFN
RSGTPLAYDSASPFRLNNLVTYRKEFGDLLFSADAQFDGNKGSGGSDFVNAGIRYKTDLIYIAAAFYNKELEDNKDENTF
GVTLAKSFNDLYLAAAYQNIEKDDIDGTTLDGSTLDVVASYPITDSYKIKLGVSRYDDGGNDITSAKYNAYNTTLEWHKT
PQFSTFIEYQKTDFEYRETNDQFMLGMRYNFDYTF
>Mature_355_residues
MKQFKLTSAVLVLSFATPIFAVQANDTAATNDELRTELQQIQQRLAMLEAQEKEASVLSDTQFNFYGSLRPTFGLTHTNS
DDVWDVGDANSRIGFAAEHQLGNGLVGFAKGEFKVDIKDDGDFGDARKAYVGLKGFFGSVAIGKQAVTQEIISDPVDIFN
RSGTPLAYDSASPFRLNNLVTYRKEFGDLLFSADAQFDGNKGSGGSDFVNAGIRYKTDLIYIAAAFYNKELEDNKDENTF
GVTLAKSFNDLYLAAAYQNIEKDDIDGTTLDGSTLDVVASYPITDSYKIKLGVSRYDDGGNDITSAKYNAYNTTLEWHKT
PQFSTFIEYQKTDFEYRETNDQFMLGMRYNFDYTF

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39547; Mature: 39547

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFKLTSAVLVLSFATPIFAVQANDTAATNDELRTELQQIQQRLAMLEAQEKEASVLSD
CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TQFNFYGSLRPTFGLTHTNSDDVWDVGDANSRIGFAAEHQLGNGLVGFAKGEFKVDIKDD
CCEEEEECCCCCEEEEECCCCCCEECCCCCCCCCEEEHHCCCCCEEEEECCEEEEEECCC
GDFGDARKAYVGLKGFFGSVAIGKQAVTQEIISDPVDIFNRSGTPLAYDSASPFRLNNLV
CCCCCCHHHEEEHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCEEHHHHH
TYRKEFGDLLFSADAQFDGNKGSGGSDFVNAGIRYKTDLIYIAAAFYNKELEDNKDENTF
HHHHHHHHEEEECCCCCCCCCCCCCHHHHHCCCEEEEEEEEEEEEHHCCCCCCCCCCCEE
GVTLAKSFNDLYLAAAYQNIEKDDIDGTTLDGSTLDVVASYPITDSYKIKLGVSRYDDGG
EEEEECCCCCEEEEEHHCCCCCCCCCCEEECCCCEEEEEECCCCCCEEEEEECEECCCCC
NDITSAKYNAYNTTLEWHKTPQFSTFIEYQKTDFEYRETNDQFMLGMRYNFDYTF
CCCCCCEECEEECEEEECCCCCHHHEEEECCCCCCEECCCCEEEEEEEECCEECC
>Mature Secondary Structure
MKQFKLTSAVLVLSFATPIFAVQANDTAATNDELRTELQQIQQRLAMLEAQEKEASVLSD
CCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TQFNFYGSLRPTFGLTHTNSDDVWDVGDANSRIGFAAEHQLGNGLVGFAKGEFKVDIKDD
CCEEEEECCCCCEEEEECCCCCCEECCCCCCCCCEEEHHCCCCCEEEEECCEEEEEECCC
GDFGDARKAYVGLKGFFGSVAIGKQAVTQEIISDPVDIFNRSGTPLAYDSASPFRLNNLV
CCCCCCHHHEEEHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCCCEEECCCCCEEHHHHH
TYRKEFGDLLFSADAQFDGNKGSGGSDFVNAGIRYKTDLIYIAAAFYNKELEDNKDENTF
HHHHHHHHEEEECCCCCCCCCCCCCHHHHHCCCEEEEEEEEEEEEHHCCCCCCCCCCCEE
GVTLAKSFNDLYLAAAYQNIEKDDIDGTTLDGSTLDVVASYPITDSYKIKLGVSRYDDGG
EEEEECCCCCEEEEEHHCCCCCCCCCCEEECCCCEEEEEECCCCCCEEEEEECEECCCCC
NDITSAKYNAYNTTLEWHKTPQFSTFIEYQKTDFEYRETNDQFMLGMRYNFDYTF
CCCCCCEECEEECEEEECCCCCHHHEEEECCCCCCEECCCCEEEEEEEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA