| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is pqqL [H]
Identifier: 126175937
GI number: 126175937
Start: 4388518
End: 4391322
Strand: Reverse
Name: pqqL [H]
Synonym: Sbal_3743
Alternate gene names: 126175937
Gene position: 4391322-4388518 (Counterclockwise)
Preceding gene: 126175939
Following gene: 126175935
Centisome position: 85.64
GC content: 50.02
Gene sequence:
>2805_bases ATGCGCCAGTGGTTACTGCTGGCATTATTAAGTGTGGCGTTACCGCTACAGGCGAGCGAAGAGCCGCAGTGGATGGGGAC GGCTGACTTGCCCATGAGTGGGCGAATCCATACCGGTGAACTTGCCAATGGCATGCGCTATTTATTAGTGAGCAATAAGA CGCCAGAGCAGGCTGTCATAGTACGCATGCGGGTGGACGTGGGCTCAGTGGTGGAGTCTGATACCGAGCAGGGGTTAGTG CATTTTCTTGAGCACATGGCCTTTAATGGCTCGACGGGTTTGGCTGCGGGGGAGATGATCCCGACATTGCAGCGTCTTGG TCTGAGTTTTGGCGCCGATACCAATGCTGTGACTGAGTTTCAGCAGACGGTTTATCAGTTCAACTTGCCCAGTAATAGCC AAGATAAAGTCGATACCGCTTTGTTTTTAATGCGCGAAATTGGCAGTAATTTATTACTCGACCCGGCGCTTATCGAGCGT GAAAAAGCTGTGGTATTGGCTGAACTGCGTGAGCGTAGCGGTGCGAATCTGGAGAATTACCGCAATCAATTACAGTTTTT AATGCCAGATACACTGTTGTCAAAGCGCTTACCTGTGGGTGAGGCGAACAGCATCAAGAATGCTACTCGCGAGACGCTGC TGTCTTTATACCAAGGTTTTTACACGCCCTCACGCACCACCTTAATTGTGGTGGGTGATATCGAGGTAGCCGCAGTTGAA CAAAAGATAAAACAACAGTTTGCCAGTTGGCAGGCCGCGCCTTTGGCGGCGAAGGTTAAGCCGCAAGCGCTAGGCACTGT CGCAGAGCGTCAACACGTCGATGCGGCGGCATTTTTCGATCCTAGCCTATCGACCTCGGTTTCCCTCGGTATGCTCAAGC CTATGGCATACCCTGCCGACAGCCCTGCCGTGCGAGAGCAGGAAATACTGCTCGAACTCGCCCACGGCATCTTGTATCGC AGAATGGAGTCGCAGCGACTGCACAGCCAAGGTTTATCTGGCGTTAGCCTGCAGGTTGGGGATCAATTTGATATCGCCTA TGGCACTCAAATGAGCTTAGGTACGCAGGAGAATAACTGGCAAGAGGGCATAGCAATATTGGATCAAACCCTGCGCCAAG CACAAGAGTTTGGTTTTAGTCAGCAGGAAATTGACCAACAAATCAAACGTATGCACAAAGGGTATCAGCTCAGCGCAGCG GGTAGCACTACTATCCATAGTGTGAATATTGCCGAGTGGTTAGTGTATTCGGTCGCGGAAAATCGCGTGCCTGTAGAGCC TGAGTGGCAGCTGGCATTTTTTGAAAAAATACTGCCGACAGTGACGCCGCAAAAGCTAAAGCAAGTGTTTAATCAGACAT GGAATGCTACGCCGTATCTGTATCTGACGAGCAATAAGCCCATCGAAAATGTTGAAAAACAGCTTATCGCTAGCTATGAG AAAAGCCGCAAACAAGCTGTGAGTGCGCCAGCAACTAAGGCGATTGACGAGTTTGCATACACTCAATTTGGCGATCAAGG CAAGTTAGTGGCCGATAGTCGCGATGCCGAAACGGGCATTCGCCAGCTACAGTTTGCCAATGGCGTACGCCTTAATCTTA AGCCTACTGACTTTAATAAAGGCACTACTTTGGTCAGCCTCAACATAGGCTTTGGTGAAGTGCCATTCCCTGAGTTAGAT GGCTTATCTTATCTGTTTAACAGTGCGTTTGTGCAGGGTGGACTCAAGGCCCATGATAATGAAAGCCTGCAGGAGATTTT TGCTGGGCAAGATATTTCCATCAACCTAGGCGTGCGTGAGCAGAGTTTTGGCGGTGAGATTAGTACCAATGCTGCAGAAC TGCGCACGCAGCTCGGTTTAATGACGGCCTTTTTGATTGAACCCGGCATGAATAAGCAGGCTGAGCAATTGTTCCGCGAG CAAGTGATTGCCGAGCAGCAAAGTCTCCATAGCAACCCGCAAACTGAGTTTTCTAATCAGTTTGCCCGCATCTCCCACAG TGGTGATAAACGTTATGGTTATGGTGAACCGGAAGAAATTTTAAAACGTCAGTTTGCAGAGCTGGCGCCGAGTTTCCATT CAGCCGTCGAGCAAGGGGCAATTGAAATCGCCATAGTGGGTGATTTTGACGAAGCCAGCGCCATCGCTGCAGTGGCTGAA ACTCTCGGGGCAATCAAACGCAGCCCCACTAAAAATAGCCAGTCGTTAGTGCCTATGTTCCCGAAAGTGCCTGCTAAGAT GACGTTAACACACTATGGTCATCCAGATTCAGCGGCGCTGGCCATGGTGTGGCCAACAACGGATATGACTCACCTAAGCC AACACGCTGGACTGGGATTGTTGGAGCAAGTGCTCAGCATCCTATTAACGGAAAATGTGAGAGAAAAAGCGGGCGCGAGT TATTCGCCATCGGCCTTTTCTTACAATGATCTCAATGCCAGCGGTTATGGTTATCTCGGTCTATTTAGCGTGACGACTCA AGCCATGTTGCCAACGGTTTCCGAGTATTTCACCGCTGCAGTTAACCAAGTAAAGCAGCCGCAGGGGATTAGCGAGGACT TACTTAACCGAGCCCGCCAACCTGTGCTTGAATGGATGCAAGCCGCGCCGCAGAGCAATGGTTTTTGGTTAGATTTGGCA TCAAATGCCCAGAGTTATCCTGGACGCTTTGCTGCTTTCAAACAAAGACAAGTGTTGGCACAGAAGATGACACCGGCTGA GCTCAGTAAACTGGCACAGCAATATTTGCCAGCTGATGGCAGTTTAACCATTCAAGTCCTTCCTGCACCACTTGAACCCC AGTAA
Upstream 100 bases:
>100_bases TTATTTTATCTGAAACTTAGGTGTGCGCTTCCTAGGTTTCTTATTTGATTTTGGGGGAAAAGTGCGAATTTTAATGAACA ATTTCAAGGTGATTAGTTTG
Downstream 100 bases:
>100_bases TAAGTGTTGGTGCATAGAATAGAAGATTAATCATTCACCGCCATATCCCCTGTGCTAGCCAGTGCAGGGGATATTTTGTT CTACCTCCAACGTTCAGTCT
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 934; Mature: 934
Protein sequence:
>934_residues MRQWLLLALLSVALPLQASEEPQWMGTADLPMSGRIHTGELANGMRYLLVSNKTPEQAVIVRMRVDVGSVVESDTEQGLV HFLEHMAFNGSTGLAAGEMIPTLQRLGLSFGADTNAVTEFQQTVYQFNLPSNSQDKVDTALFLMREIGSNLLLDPALIER EKAVVLAELRERSGANLENYRNQLQFLMPDTLLSKRLPVGEANSIKNATRETLLSLYQGFYTPSRTTLIVVGDIEVAAVE QKIKQQFASWQAAPLAAKVKPQALGTVAERQHVDAAAFFDPSLSTSVSLGMLKPMAYPADSPAVREQEILLELAHGILYR RMESQRLHSQGLSGVSLQVGDQFDIAYGTQMSLGTQENNWQEGIAILDQTLRQAQEFGFSQQEIDQQIKRMHKGYQLSAA GSTTIHSVNIAEWLVYSVAENRVPVEPEWQLAFFEKILPTVTPQKLKQVFNQTWNATPYLYLTSNKPIENVEKQLIASYE KSRKQAVSAPATKAIDEFAYTQFGDQGKLVADSRDAETGIRQLQFANGVRLNLKPTDFNKGTTLVSLNIGFGEVPFPELD GLSYLFNSAFVQGGLKAHDNESLQEIFAGQDISINLGVREQSFGGEISTNAAELRTQLGLMTAFLIEPGMNKQAEQLFRE QVIAEQQSLHSNPQTEFSNQFARISHSGDKRYGYGEPEEILKRQFAELAPSFHSAVEQGAIEIAIVGDFDEASAIAAVAE TLGAIKRSPTKNSQSLVPMFPKVPAKMTLTHYGHPDSAALAMVWPTTDMTHLSQHAGLGLLEQVLSILLTENVREKAGAS YSPSAFSYNDLNASGYGYLGLFSVTTQAMLPTVSEYFTAAVNQVKQPQGISEDLLNRARQPVLEWMQAAPQSNGFWLDLA SNAQSYPGRFAAFKQRQVLAQKMTPAELSKLAQQYLPADGSLTIQVLPAPLEPQ
Sequences:
>Translated_934_residues MRQWLLLALLSVALPLQASEEPQWMGTADLPMSGRIHTGELANGMRYLLVSNKTPEQAVIVRMRVDVGSVVESDTEQGLV HFLEHMAFNGSTGLAAGEMIPTLQRLGLSFGADTNAVTEFQQTVYQFNLPSNSQDKVDTALFLMREIGSNLLLDPALIER EKAVVLAELRERSGANLENYRNQLQFLMPDTLLSKRLPVGEANSIKNATRETLLSLYQGFYTPSRTTLIVVGDIEVAAVE QKIKQQFASWQAAPLAAKVKPQALGTVAERQHVDAAAFFDPSLSTSVSLGMLKPMAYPADSPAVREQEILLELAHGILYR RMESQRLHSQGLSGVSLQVGDQFDIAYGTQMSLGTQENNWQEGIAILDQTLRQAQEFGFSQQEIDQQIKRMHKGYQLSAA GSTTIHSVNIAEWLVYSVAENRVPVEPEWQLAFFEKILPTVTPQKLKQVFNQTWNATPYLYLTSNKPIENVEKQLIASYE KSRKQAVSAPATKAIDEFAYTQFGDQGKLVADSRDAETGIRQLQFANGVRLNLKPTDFNKGTTLVSLNIGFGEVPFPELD GLSYLFNSAFVQGGLKAHDNESLQEIFAGQDISINLGVREQSFGGEISTNAAELRTQLGLMTAFLIEPGMNKQAEQLFRE QVIAEQQSLHSNPQTEFSNQFARISHSGDKRYGYGEPEEILKRQFAELAPSFHSAVEQGAIEIAIVGDFDEASAIAAVAE TLGAIKRSPTKNSQSLVPMFPKVPAKMTLTHYGHPDSAALAMVWPTTDMTHLSQHAGLGLLEQVLSILLTENVREKAGAS YSPSAFSYNDLNASGYGYLGLFSVTTQAMLPTVSEYFTAAVNQVKQPQGISEDLLNRARQPVLEWMQAAPQSNGFWLDLA SNAQSYPGRFAAFKQRQVLAQKMTPAELSKLAQQYLPADGSLTIQVLPAPLEPQ >Mature_934_residues MRQWLLLALLSVALPLQASEEPQWMGTADLPMSGRIHTGELANGMRYLLVSNKTPEQAVIVRMRVDVGSVVESDTEQGLV HFLEHMAFNGSTGLAAGEMIPTLQRLGLSFGADTNAVTEFQQTVYQFNLPSNSQDKVDTALFLMREIGSNLLLDPALIER EKAVVLAELRERSGANLENYRNQLQFLMPDTLLSKRLPVGEANSIKNATRETLLSLYQGFYTPSRTTLIVVGDIEVAAVE QKIKQQFASWQAAPLAAKVKPQALGTVAERQHVDAAAFFDPSLSTSVSLGMLKPMAYPADSPAVREQEILLELAHGILYR RMESQRLHSQGLSGVSLQVGDQFDIAYGTQMSLGTQENNWQEGIAILDQTLRQAQEFGFSQQEIDQQIKRMHKGYQLSAA GSTTIHSVNIAEWLVYSVAENRVPVEPEWQLAFFEKILPTVTPQKLKQVFNQTWNATPYLYLTSNKPIENVEKQLIASYE KSRKQAVSAPATKAIDEFAYTQFGDQGKLVADSRDAETGIRQLQFANGVRLNLKPTDFNKGTTLVSLNIGFGEVPFPELD GLSYLFNSAFVQGGLKAHDNESLQEIFAGQDISINLGVREQSFGGEISTNAAELRTQLGLMTAFLIEPGMNKQAEQLFRE QVIAEQQSLHSNPQTEFSNQFARISHSGDKRYGYGEPEEILKRQFAELAPSFHSAVEQGAIEIAIVGDFDEASAIAAVAE TLGAIKRSPTKNSQSLVPMFPKVPAKMTLTHYGHPDSAALAMVWPTTDMTHLSQHAGLGLLEQVLSILLTENVREKAGAS YSPSAFSYNDLNASGYGYLGLFSVTTQAMLPTVSEYFTAAVNQVKQPQGISEDLLNRARQPVLEWMQAAPQSNGFWLDLA SNAQSYPGRFAAFKQRQVLAQKMTPAELSKLAQQYLPADGSLTIQVLPAPLEPQ
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Escherichia coli, GI1787770, Length=931, Percent_Identity=22.3415682062299, Blast_Score=158, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 102872; Mature: 102872
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQWLLLALLSVALPLQASEEPQWMGTADLPMSGRIHTGELANGMRYLLVSNKTPEQAVI CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHCCEEEEEEECCCCCCEEE VRMRVDVGSVVESDTEQGLVHFLEHMAFNGSTGLAAGEMIPTLQRLGLSFGADTNAVTEF EEEECCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH QQTVYQFNLPSNSQDKVDTALFLMREIGSNLLLDPALIEREKAVVLAELRERSGANLENY HHHHHEECCCCCCCHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHH RNQLQFLMPDTLLSKRLPVGEANSIKNATRETLLSLYQGFYTPSRTTLIVVGDIEVAAVE HHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH QKIKQQFASWQAAPLAAKVKPQALGTVAERQHVDAAAFFDPSLSTSVSLGMLKPMAYPAD HHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHCCCCCCCC SPAVREQEILLELAHGILYRRMESQRLHSQGLSGVSLQVGDQFDIAYGTQMSLGTQENNW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCEEECCCCCCCH QEGIAILDQTLRQAQEFGFSQQEIDQQIKRMHKGYQLSAAGSTTIHSVNIAEWLVYSVAE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCCEEEECHHHHHHHHHHHC NRVPVEPEWQLAFFEKILPTVTPQKLKQVFNQTWNATPYLYLTSNKPIENVEKQLIASYE CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHH KSRKQAVSAPATKAIDEFAYTQFGDQGKLVADSRDAETGIRQLQFANGVRLNLKPTDFNK HHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCEEEEEECCCCCC GTTLVSLNIGFGEVPFPELDGLSYLFNSAFVQGGLKAHDNESLQEIFAGQDISINLGVRE CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCC QSFGGEISTNAAELRTQLGLMTAFLIEPGMNKQAEQLFREQVIAEQQSLHSNPQTEFSNQ CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FARISHSGDKRYGYGEPEEILKRQFAELAPSFHSAVEQGAIEIAIVGDFDEASAIAAVAE HHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHH TLGAIKRSPTKNSQSLVPMFPKVPAKMTLTHYGHPDSAALAMVWPTTDMTHLSQHAGLGL HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCHHH LEQVLSILLTENVREKAGASYSPSAFSYNDLNASGYGYLGLFSVTTQAMLPTVSEYFTAA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH VNQVKQPQGISEDLLNRARQPVLEWMQAAPQSNGFWLDLASNAQSYPGRFAAFKQRQVLA HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH QKMTPAELSKLAQQYLPADGSLTIQVLPAPLEPQ HHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MRQWLLLALLSVALPLQASEEPQWMGTADLPMSGRIHTGELANGMRYLLVSNKTPEQAVI CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCHHHCCEEEEEEECCCCCCEEE VRMRVDVGSVVESDTEQGLVHFLEHMAFNGSTGLAAGEMIPTLQRLGLSFGADTNAVTEF EEEECCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHH QQTVYQFNLPSNSQDKVDTALFLMREIGSNLLLDPALIEREKAVVLAELRERSGANLENY HHHHHEECCCCCCCHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHCCCCHHHH RNQLQFLMPDTLLSKRLPVGEANSIKNATRETLLSLYQGFYTPSRTTLIVVGDIEVAAVE HHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHH QKIKQQFASWQAAPLAAKVKPQALGTVAERQHVDAAAFFDPSLSTSVSLGMLKPMAYPAD HHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHCCCCCCCC SPAVREQEILLELAHGILYRRMESQRLHSQGLSGVSLQVGDQFDIAYGTQMSLGTQENNW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEEECCEEECCCCCCCH QEGIAILDQTLRQAQEFGFSQQEIDQQIKRMHKGYQLSAAGSTTIHSVNIAEWLVYSVAE HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEECCCCCEEEECHHHHHHHHHHHC NRVPVEPEWQLAFFEKILPTVTPQKLKQVFNQTWNATPYLYLTSNKPIENVEKQLIASYE CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHH KSRKQAVSAPATKAIDEFAYTQFGDQGKLVADSRDAETGIRQLQFANGVRLNLKPTDFNK HHHHHHHCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHCCCEEEEEECCCCCC GTTLVSLNIGFGEVPFPELDGLSYLFNSAFVQGGLKAHDNESLQEIFAGQDISINLGVRE CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCC QSFGGEISTNAAELRTQLGLMTAFLIEPGMNKQAEQLFREQVIAEQQSLHSNPQTEFSNQ CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FARISHSGDKRYGYGEPEEILKRQFAELAPSFHSAVEQGAIEIAIVGDFDEASAIAAVAE HHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCEEEEEEECCCHHHHHHHHHH TLGAIKRSPTKNSQSLVPMFPKVPAKMTLTHYGHPDSAALAMVWPTTDMTHLSQHAGLGL HHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHCCHHH LEQVLSILLTENVREKAGASYSPSAFSYNDLNASGYGYLGLFSVTTQAMLPTVSEYFTAA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH VNQVKQPQGISEDLLNRARQPVLEWMQAAPQSNGFWLDLASNAQSYPGRFAAFKQRQVLA HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH QKMTPAELSKLAQQYLPADGSLTIQVLPAPLEPQ HHCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]